RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 EDA2RQ9HAV5 297 aa11.25□□□□□ -0.61
SMAD6-201ENST00000288840 CCL18P55774 89 aa11.24□□□□□ -0.61
SMAD6-201ENST00000288840 INAFM2P0DMQ5 153 aa11.24□□□□□ -0.61
SMAD6-201ENST00000288840 FHL2Q14192 279 aa11.24□□□□□ -0.61
SMAD6-201ENST00000288840 LINC00959A0A1B0GUT2 108 aa11.23□□□□□ -0.61
SMAD6-201ENST00000288840 SMIM11BQ8TCY0 68 aa11.23□□□□□ -0.61
SMAD6-201ENST00000288840 C9orf153Q5TBE3 101 aa11.23□□□□□ -0.61
SMAD6-201ENST00000288840 TIMM17BO60830 172 aa11.22□□□□□ -0.61
SMAD6-201ENST00000288840 NOTCH1P46531 2555 aa11.22□□□□□ -0.61
SMAD6-201ENST00000288840 Q8N3U1 123 aa11.22□□□□□ -0.61
SMAD6-201ENST00000288840 FAM104AQ969W3 186 aa11.22□□□□□ -0.61
SMAD6-201ENST00000288840 MGAM2Q2M2H8 2515 aa11.21□□□□□ -0.62
SMAD6-201ENST00000288840 CR1P17927 2039 aa11.21□□□□□ -0.62
SMAD6-201ENST00000288840 LINC00337Q8N6G1 96 aa11.2□□□□□ -0.62
SMAD6-201ENST00000288840 LY6G6DO95868 133 aa11.2□□□□□ -0.62
SMAD6-201ENST00000288840 CHCHD10Q8WYQ3 142 aaPredicted RBP11.2□□□□□ -0.62
SMAD6-201ENST00000288840 A0A0U1RQV1 116 aa11.2□□□□□ -0.62
SMAD6-201ENST00000288840 REG3AQ06141 175 aa11.19□□□□□ -0.62
SMAD6-201ENST00000288840 APOC4P55056 127 aa11.19□□□□□ -0.62
SMAD6-201ENST00000288840 SDIM1Q6ZPB5 146 aa11.19□□□□□ -0.62
SMAD6-201ENST00000288840 XAGE1AQ9HD64 81 aa11.19□□□□□ -0.62
SMAD6-201ENST00000288840 A0A087WYN8 130 aa11.18□□□□□ -0.62
SMAD6-201ENST00000288840 IGLV5-39A0A0G2JS06 123 aa11.18□□□□□ -0.62
SMAD6-201ENST00000288840 HILS1P60008 231 aa11.18□□□□□ -0.62
SMAD6-201ENST00000288840 FAM218AQ96MZ4 157 aa11.18□□□□□ -0.62
SMAD6-201ENST00000288840 HIGD2BQ4VC39 106 aa11.17□□□□□ -0.62
SMAD6-201ENST00000288840 C9orf66Q5T8R8 295 aa11.17□□□□□ -0.62
SMAD6-201ENST00000288840 RPL18AQ02543 176 aaKnown RBP11.17□□□□□ -0.62
SMAD6-201ENST00000288840 SPAG11BQ08648 103 aa11.17□□□□□ -0.62
SMAD6-201ENST00000288840 ORMDL1Q9P0S3 153 aa11.16□□□□□ -0.62
SMAD6-201ENST00000288840 IGHV4-28A0A0C4DH34 117 aa11.16□□□□□ -0.62
SMAD6-201ENST00000288840 ZNF561-AS1K7EIQ3 104 aa11.16□□□□□ -0.62
SMAD6-201ENST00000288840 LOC107984640A0A0U1RRK4 108 aa11.16□□□□□ -0.62
SMAD6-201ENST00000288840 GIG44P09565 113 aaPredicted RBP11.16□□□□□ -0.62
SMAD6-201ENST00000288840 SMIM9A6NGZ8 99 aa11.15□□□□□ -0.62
SMAD6-201ENST00000288840 SPART-AS1P0CW21 52 aa11.15□□□□□ -0.62
SMAD6-201ENST00000288840 IBA57-AS1B1ANH7 110 aa11.15□□□□□ -0.63
SMAD6-201ENST00000288840 H0YGX0 51 aa11.15□□□□□ -0.63
SMAD6-201ENST00000288840 SEC61GP60059 68 aa11.15□□□□□ -0.63
SMAD6-201ENST00000288840 CSDC2Q9Y534 153 aaKnown RBP11.15□□□□□ -0.63
SMAD6-201ENST00000288840 A8MTW9 85 aa11.14□□□□□ -0.63
SMAD6-201ENST00000288840 SBSPONQ8IVN8 264 aa11.14□□□□□ -0.63
SMAD6-201ENST00000288840 OVOL2Q9BRP0 275 aa11.14□□□□□ -0.63
SMAD6-201ENST00000288840 HAMPP81172 84 aa11.14□□□□□ -0.63
SMAD6-201ENST00000288840 NBEAL1Q6ZS30 2694 aa11.14□□□□□ -0.63
SMAD6-201ENST00000288840 IGLV5-45A0A087WSX0 123 aa11.13□□□□□ -0.63
SMAD6-201ENST00000288840 TRACP01848 142 aa11.13□□□□□ -0.63
SMAD6-201ENST00000288840 C6orf99Q4VX62 202 aa11.13□□□□□ -0.63
SMAD6-201ENST00000288840 IGHV3OR16-9A0A0B4J2B5 98 aa11.12□□□□□ -0.63
SMAD6-201ENST00000288840 KRTAP1-3Q8IUG1 177 aa11.12□□□□□ -0.63
SMAD6-201ENST00000288840 C6orf223Q8N319 242 aa11.12□□□□□ -0.63
SMAD6-201ENST00000288840 A0A087WZ39 114 aa11.12□□□□□ -0.63
SMAD6-201ENST00000288840 MRAPQ8TCY5 172 aa11.11□□□□□ -0.63
SMAD6-201ENST00000288840 UNQ6190/PRO20217Q6UXQ8 127 aa11.11□□□□□ -0.63
SMAD6-201ENST00000288840 OXLD1Q5BKU9 147 aa11.1□□□□□ -0.63
SMAD6-201ENST00000288840 DEFB121Q5J5C9 76 aa11.1□□□□□ -0.63
SMAD6-201ENST00000288840 IGKV2D-24A0A075B6R9 120 aa11.1□□□□□ -0.63
SMAD6-201ENST00000288840 V9GYY9 64 aa11.1□□□□□ -0.63
SMAD6-201ENST00000288840 STAB1Q9NY15 2570 aa11.1□□□□□ -0.63
SMAD6-201ENST00000288840 ACYP1P07311 99 aa11.09□□□□□ -0.63
SMAD6-201ENST00000288840 HRCT1Q6UXD1 115 aa11.09□□□□□ -0.63
SMAD6-201ENST00000288840 LINC00643Q86TS7 51 aa11.09□□□□□ -0.63
SMAD6-201ENST00000288840 RETNQ9HD89 108 aa11.09□□□□□ -0.63
SMAD6-201ENST00000288840 WFDC9Q8NEX5 89 aa11.08□□□□□ -0.64
SMAD6-201ENST00000288840 HIVEP1P15822 2718 aa11.08□□□□□ -0.64
SMAD6-201ENST00000288840 CAMK2N2Q96S95 79 aa11.08□□□□□ -0.64
SMAD6-201ENST00000288840 TMEM126AQ9H061 195 aa11.08□□□□□ -0.64
SMAD6-201ENST00000288840 PLAC8L1A1L4L8 177 aa11.07□□□□□ -0.64
SMAD6-201ENST00000288840 SPATA3Q8NHX4 192 aa11.07□□□□□ -0.64
SMAD6-201ENST00000288840 A0A1B0GX51 115 aa11.07□□□□□ -0.64
SMAD6-201ENST00000288840 DEFB105AQ8NG35 78 aa11.07□□□□□ -0.64
SMAD6-201ENST00000288840 CELA1Q9UNI1 258 aa11.07□□□□□ -0.64
SMAD6-201ENST00000288840 A0A087WVE0 104 aa11.06□□□□□ -0.64
SMAD6-201ENST00000288840 IGKV2-28A0A075B6P5 120 aa11.06□□□□□ -0.64
SMAD6-201ENST00000288840 IGKV2D-28P01615 120 aa11.06□□□□□ -0.64
SMAD6-201ENST00000288840 CXCL5P42830 114 aa11.05□□□□□ -0.64
SMAD6-201ENST00000288840 RPL28P46779 137 aaKnown RBP11.05□□□□□ -0.64
SMAD6-201ENST00000288840 PRB2P02812 416 aaPredicted RBP11.05□□□□□ -0.64
SMAD6-201ENST00000288840 CD164L2Q6UWJ8 174 aa11.05□□□□□ -0.64
SMAD6-201ENST00000288840 C19orf73Q9NVV2 129 aa11.04□□□□□ -0.64
SMAD6-201ENST00000288840 UBL5Q9BZL1 73 aa11.04□□□□□ -0.64
SMAD6-201ENST00000288840 LYRM9A8MSI8 78 aa11.03□□□□□ -0.64
SMAD6-201ENST00000288840 CSNK1G2-AS1Q8NCQ2 148 aa11.03□□□□□ -0.64
SMAD6-201ENST00000288840 IGHV4-30-4P0DP06 118 aa11.03□□□□□ -0.64
SMAD6-201ENST00000288840 CYSRT1A8MQ03 144 aa11.03□□□□□ -0.64
SMAD6-201ENST00000288840 C16orf95Q9H693 158 aa11.03□□□□□ -0.64
SMAD6-201ENST00000288840 KIR2DL5BQ8NHK3 375 aa11.02□□□□□ -0.64
SMAD6-201ENST00000288840 TRAV23DV6A0A075B6W5 121 aa11.02□□□□□ -0.65
SMAD6-201ENST00000288840 X6R8D5 127 aa11.02□□□□□ -0.65
SMAD6-201ENST00000288840 COL6A5A8TX70 2615 aa11.02□□□□□ -0.65
SMAD6-201ENST00000288840 FAM19A5Q7Z5A7 132 aaPredicted RBP11.01□□□□□ -0.65
SMAD6-201ENST00000288840 J3KT08 172 aa11.01□□□□□ -0.65
SMAD6-201ENST00000288840 KRTAP10-3P60369 221 aa11.01□□□□□ -0.65
SMAD6-201ENST00000288840 Q8IZM0 81 aa11.01□□□□□ -0.65
SMAD6-201ENST00000288840 NBPF19A0A087WUL8 3843 aa11□□□□□ -0.65
SMAD6-201ENST00000288840 DSCR8Q96T75 97 aa11□□□□□ -0.65
SMAD6-201ENST00000288840 SCXQ7RTU7 201 aa11□□□□□ -0.65
SMAD6-201ENST00000288840 C10orf25Q5T742 122 aa10.99□□□□□ -0.65
SMAD6-201ENST00000288840 KLK5Q9Y337 293 aaPredicted RBP10.99□□□□□ -0.65
SMAD6-201ENST00000288840 IL17DQ8TAD2 202 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms