RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 ALKBH7Q9BT30 221 aaPredicted RBP9.1□□□□□ -0.95
SOD1-201ENST00000270142 NUPR1O60356 82 aa9.09□□□□□ -0.95
SOD1-201ENST00000270142 CDKN2A-AS1Q9UH64 79 aa9.09□□□□□ -0.95
SOD1-201ENST00000270142 CARHSP1Q9Y2V2 147 aaKnown RBP9.09□□□□□ -0.95
SOD1-201ENST00000270142 K7EMI3 77 aa9.08□□□□□ -0.96
SOD1-201ENST00000270142 MT-ND4LP03901 98 aa9.08□□□□□ -0.96
SOD1-201ENST00000270142 HERVK_113P63121 156 aa9.08□□□□□ -0.96
SOD1-201ENST00000270142 PRR4Q16378 134 aa9.08□□□□□ -0.96
SOD1-201ENST00000270142 CTDSP1Q9GZU7 261 aa9.07□□□□□ -0.96
SOD1-201ENST00000270142 NXT2Q9NPJ8 142 aaKnown RBP9.07□□□□□ -0.96
SOD1-201ENST00000270142 MUC2Q02817 5179 aa9.06□□□□□ -0.96
SOD1-201ENST00000270142 F8VRH5 84 aa9.06□□□□□ -0.96
SOD1-201ENST00000270142 SEC11AP67812 179 aa9.06□□□□□ -0.96
SOD1-201ENST00000270142 LBHQ53QV2 105 aaPredicted RBP9.06□□□□□ -0.96
SOD1-201ENST00000270142 TIMM17AQ99595 171 aa9.06□□□□□ -0.96
SOD1-201ENST00000270142 GEMIN7Q9H840 131 aaKnown RBP9.06□□□□□ -0.96
SOD1-201ENST00000270142 PAPPA-AS1Q5QFB9 102 aa9.05□□□□□ -0.96
SOD1-201ENST00000270142 MRPL55Q7Z7F7 128 aaKnown RBP9.05□□□□□ -0.96
SOD1-201ENST00000270142 TOMM6Q96B49 74 aa9.05□□□□□ -0.96
SOD1-201ENST00000270142 CXCL5P42830 114 aa9.04□□□□□ -0.96
SOD1-201ENST00000270142 TP73-AS1Q9UF72 201 aa9.04□□□□□ -0.96
SOD1-201ENST00000270142 A0A087X002 238 aa9.03□□□□□ -0.96
SOD1-201ENST00000270142 SMIM1B2RUZ4 78 aa9.03□□□□□ -0.96
SOD1-201ENST00000270142 KIAA1644Q3SXP7 199 aa9.03□□□□□ -0.96
SOD1-201ENST00000270142 BCE1O60756 84 aa9.02□□□□□ -0.97
SOD1-201ENST00000270142 G0S2P27469 103 aa9.02□□□□□ -0.97
SOD1-201ENST00000270142 TSPAN13O95857 204 aa9.01□□□□□ -0.97
SOD1-201ENST00000270142 RPL28P46779 137 aaKnown RBP9.01□□□□□ -0.97
SOD1-201ENST00000270142 ERASQ7Z444 233 aa9.01□□□□□ -0.97
SOD1-201ENST00000270142 SCGB3A1Q96QR1 104 aa9.01□□□□□ -0.97
SOD1-201ENST00000270142 RPL37AP8A6NKH3 93 aa9□□□□□ -0.97
SOD1-201ENST00000270142 ADCYAP1P18509 176 aa9□□□□□ -0.97
SOD1-201ENST00000270142 COX7B2Q8TF08 81 aa9□□□□□ -0.97
SOD1-201ENST00000270142 LINC00167Q96N53 147 aa9□□□□□ -0.97
SOD1-201ENST00000270142 IGLV5-45A0A087WSX0 123 aa8.99□□□□□ -0.97
SOD1-201ENST00000270142 TINCRA0A1B0GVN0 87 aa8.99□□□□□ -0.97
SOD1-201ENST00000270142 PDZD11Q5EBL8 140 aa8.99□□□□□ -0.97
SOD1-201ENST00000270142 GAGE10A6NGK3 116 aa8.98□□□□□ -0.97
SOD1-201ENST00000270142 RAB14P61106 215 aa8.98□□□□□ -0.97
SOD1-201ENST00000270142 TYMSOSQ8TAI1 123 aa8.98□□□□□ -0.97
SOD1-201ENST00000270142 SPINK8P0C7L1 97 aa8.97□□□□□ -0.97
SOD1-201ENST00000270142 CRYGAP11844 174 aa8.97□□□□□ -0.97
SOD1-201ENST00000270142 ANAPC11Q9NYG5 84 aa8.97□□□□□ -0.97
SOD1-201ENST00000270142 IGLV5-37A0A075B6J1 123 aa8.96□□□□□ -0.98
SOD1-201ENST00000270142 RAB5BP61020 215 aa8.96□□□□□ -0.98
SOD1-201ENST00000270142 CST9LQ9H4G1 147 aa8.96□□□□□ -0.98
SOD1-201ENST00000270142 MUC17Q685J3 4493 aa8.95□□□□□ -0.98
SOD1-201ENST00000270142 LINC01546A6NGU7 62 aa8.95□□□□□ -0.98
SOD1-201ENST00000270142 KRTAP13-1Q8IUC0 172 aa8.95□□□□□ -0.98
SOD1-201ENST00000270142 TRAV9-1A0A075B6T8 112 aa8.93□□□□□ -0.98
SOD1-201ENST00000270142 TMEM238LA0A1B0GVL6 79 aa8.93□□□□□ -0.98
SOD1-201ENST00000270142 SCO1O75880 301 aa8.93□□□□□ -0.98
SOD1-201ENST00000270142 UBE2AP49459 152 aa8.93□□□□□ -0.98
SOD1-201ENST00000270142 PMVKQ15126 192 aa8.93□□□□□ -0.98
SOD1-201ENST00000270142 KRTAP13-2Q52LG2 175 aa8.93□□□□□ -0.98
SOD1-201ENST00000270142 CLLU1Q5K131 121 aa8.93□□□□□ -0.98
SOD1-201ENST00000270142 NKAPP1Q8N9T2 125 aa8.93□□□□□ -0.98
SOD1-201ENST00000270142 LINC01549A6NIU2 74 aa8.92□□□□□ -0.98
SOD1-201ENST00000270142 GNB1LQ9BYB4 327 aa8.92□□□□□ -0.98
SOD1-201ENST00000270142 IGKV2-28A0A075B6P5 120 aa8.91□□□□□ -0.98
SOD1-201ENST00000270142 IGKV2D-28P01615 120 aa8.91□□□□□ -0.98
SOD1-201ENST00000270142 C21orf62-AS1Q17RA5 79 aa8.91□□□□□ -0.98
SOD1-201ENST00000270142 TMEM218A2RU14 115 aa8.9□□□□□ -0.98
SOD1-201ENST00000270142 H3BRM9 83 aa8.9□□□□□ -0.98
SOD1-201ENST00000270142 ATP5LO75964 103 aa8.9□□□□□ -0.98
SOD1-201ENST00000270142 FA2HQ7L5A8 372 aa8.9□□□□□ -0.98
SOD1-201ENST00000270142 MRPL18Q9H0U6 180 aaKnown RBP8.9□□□□□ -0.98
SOD1-201ENST00000270142 A0A0U1RQV1 116 aa8.89□□□□□ -0.99
SOD1-201ENST00000270142 PFN2P35080 140 aa8.89□□□□□ -0.99
SOD1-201ENST00000270142 RETNLBQ9BQ08 111 aa8.89□□□□□ -0.99
SOD1-201ENST00000270142 SMCO4Q9NRQ5 59 aa8.89□□□□□ -0.99
SOD1-201ENST00000270142 IGLC3P0DOY3 106 aa8.88□□□□□ -0.99
SOD1-201ENST00000270142 S100PP25815 95 aa8.88□□□□□ -0.99
SOD1-201ENST00000270142 PRLHP81277 87 aa8.88□□□□□ -0.99
SOD1-201ENST00000270142 FAM229BQ4G0N7 80 aa8.88□□□□□ -0.99
SOD1-201ENST00000270142 UQCC3Q6UW78 93 aa8.88□□□□□ -0.99
SOD1-201ENST00000270142 FAT4Q6V0I7 4981 aa8.88□□□□□ -0.99
SOD1-201ENST00000270142 IGLV5-39A0A0G2JS06 123 aa8.87□□□□□ -0.99
SOD1-201ENST00000270142 VPREB1P12018 145 aa8.87□□□□□ -0.99
SOD1-201ENST00000270142 ZNF22P17026 224 aaPredicted RBP8.87□□□□□ -0.99
SOD1-201ENST00000270142 LINC00304Q8N9R0 145 aa8.87□□□□□ -0.99
SOD1-201ENST00000270142 TMEM238C9JI98 176 aa8.86□□□□□ -0.99
SOD1-201ENST00000270142 FABP9Q0Z7S8 132 aa8.86□□□□□ -0.99
SOD1-201ENST00000270142 SND1-IT1Q9HBX3 110 aa8.86□□□□□ -0.99
SOD1-201ENST00000270142 ERG28Q9UKR5 140 aa8.86□□□□□ -0.99
SOD1-201ENST00000270142 A0A096LNJ9 63 aa8.85□□□□□ -0.99
SOD1-201ENST00000270142 COX19Q49B96 90 aa8.85□□□□□ -0.99
SOD1-201ENST00000270142 FAM19A1Q7Z5A9 133 aa8.85□□□□□ -0.99
SOD1-201ENST00000270142 SEC11CQ9BY50 192 aa8.85□□□□□ -0.99
SOD1-201ENST00000270142 TMEM126AQ9H061 195 aa8.85□□□□□ -0.99
SOD1-201ENST00000270142 NDUFA6P56556 154 aa8.84□□□□□ -0.99
SOD1-201ENST00000270142 Q8NDZ9 215 aa8.84□□□□□ -0.99
SOD1-201ENST00000270142 IGKV2D-26A0A0A0MRZ7 120 aa8.83□□□□□ -1
SOD1-201ENST00000270142 M0R378 163 aa8.83□□□□□ -1
SOD1-201ENST00000270142 URB1-AS1Q96HZ7 61 aa8.83□□□□□ -1
SOD1-201ENST00000270142 ZNF625Q96I27 306 aaPredicted RBP8.83□□□□□ -1
SOD1-201ENST00000270142 RPL24P83731 157 aaKnown RBP8.82□□□□□ -1
SOD1-201ENST00000270142 IFITM2Q01629 132 aa8.81□□□□□ -1
SOD1-201ENST00000270142 COX17Q14061 63 aa8.81□□□□□ -1
SOD1-201ENST00000270142 HBDP02042 147 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms