RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 Q6ZVH6 145 aa8.97□□□□□ -0.97
SGCA-201ENST00000262018 PLA2G2DQ9UNK4 145 aa8.97□□□□□ -0.97
SGCA-201ENST00000262018 KRTAP29-1A8MX34 341 aaPredicted RBP8.97□□□□□ -0.97
SGCA-201ENST00000262018 GCSHP23434 173 aa8.97□□□□□ -0.97
SGCA-201ENST00000262018 HERVK_113P63121 156 aa8.97□□□□□ -0.97
SGCA-201ENST00000262018 VAMP3Q15836 100 aa8.97□□□□□ -0.97
SGCA-201ENST00000262018 TTTY13Q9BZ97 58 aa8.97□□□□□ -0.97
SGCA-201ENST00000262018 A0A1B0GWB2 263 aa8.96□□□□□ -0.98
SGCA-201ENST00000262018 HAMPP81172 84 aa8.96□□□□□ -0.98
SGCA-201ENST00000262018 LINC00242Q5T6M2 205 aa8.96□□□□□ -0.98
SGCA-201ENST00000262018 LELP1Q5T871 98 aa8.96□□□□□ -0.98
SGCA-201ENST00000262018 GEMIN7Q9H840 131 aaKnown RBP8.96□□□□□ -0.98
SGCA-201ENST00000262018 TMEM238C9JI98 176 aa8.95□□□□□ -0.98
SGCA-201ENST00000262018 RBX1P62877 108 aa8.95□□□□□ -0.98
SGCA-201ENST00000262018 TRAV13-1A0A0B4J241 112 aa8.94□□□□□ -0.98
SGCA-201ENST00000262018 IGHV1-58A0A0C4DH39 117 aa8.94□□□□□ -0.98
SGCA-201ENST00000262018 TMEM262E9PQX1 116 aa8.94□□□□□ -0.98
SGCA-201ENST00000262018 COX6A2Q02221 97 aa8.94□□□□□ -0.98
SGCA-201ENST00000262018 SRSF9Q13242 221 aaKnown RBP eCLIP8.94□□□□□ -0.98
SGCA-201ENST00000262018 LYRM7Q5U5X0 104 aa8.94□□□□□ -0.98
SGCA-201ENST00000262018 LYPD5Q6UWN5 251 aa8.94□□□□□ -0.98
SGCA-201ENST00000262018 COPS9Q8WXC6 57 aa8.94□□□□□ -0.98
SGCA-201ENST00000262018 FABP2P12104 132 aa8.93□□□□□ -0.98
SGCA-201ENST00000262018 TSPEAR-AS2P59090 65 aa8.93□□□□□ -0.98
SGCA-201ENST00000262018 CDKN2A-AS1Q9UH64 79 aa8.93□□□□□ -0.98
SGCA-201ENST00000262018 ESRGQ1W209 222 aa8.92□□□□□ -0.98
SGCA-201ENST00000262018 CCL25O15444 150 aa8.91□□□□□ -0.98
SGCA-201ENST00000262018 TIMM17BO60830 172 aa8.91□□□□□ -0.98
SGCA-201ENST00000262018 RPL24P83731 157 aaKnown RBP8.91□□□□□ -0.98
SGCA-201ENST00000262018 SFTA2Q6UW10 78 aa8.91□□□□□ -0.98
SGCA-201ENST00000262018 TRAV8-3A0A0A6YYJ7 113 aa8.9□□□□□ -0.98
SGCA-201ENST00000262018 LINC00959A0A1B0GUT2 108 aa8.9□□□□□ -0.98
SGCA-201ENST00000262018 A0A1W2PPM0 123 aa8.9□□□□□ -0.98
SGCA-201ENST00000262018 GAGE10A6NGK3 116 aa8.9□□□□□ -0.98
SGCA-201ENST00000262018 SPINK8P0C7L1 97 aa8.9□□□□□ -0.98
SGCA-201ENST00000262018 IGHV3-30-3P0DP02 117 aa8.9□□□□□ -0.98
SGCA-201ENST00000262018 FXYD2P54710 66 aa8.9□□□□□ -0.98
SGCA-201ENST00000262018 Q6ZRN7 208 aaPredicted RBP8.9□□□□□ -0.98
SGCA-201ENST00000262018 UPK3BQ9BT76 320 aa8.9□□□□□ -0.98
SGCA-201ENST00000262018 PPDPFQ9H3Y8 114 aa8.9□□□□□ -0.98
SGCA-201ENST00000262018 NHP2Q9NX24 153 aaKnown RBP8.9□□□□□ -0.98
SGCA-201ENST00000262018 IGHV3-64A0A075B6Q5 118 aa8.89□□□□□ -0.99
SGCA-201ENST00000262018 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.89□□□□□ -0.99
SGCA-201ENST00000262018 IGLV5-39A0A0G2JS06 123 aa8.89□□□□□ -0.99
SGCA-201ENST00000262018 A0A0J9YXY3 114 aa8.89□□□□□ -0.99
SGCA-201ENST00000262018 K7EP34 96 aa8.88□□□□□ -0.99
SGCA-201ENST00000262018 IGKV3OR2-268A0A0C4DH90 116 aa8.88□□□□□ -0.99
SGCA-201ENST00000262018 SMIM1B2RUZ4 78 aa8.88□□□□□ -0.99
SGCA-201ENST00000262018 H3BUT2 72 aa8.88□□□□□ -0.99
SGCA-201ENST00000262018 IFITM1P13164 125 aa8.88□□□□□ -0.99
SGCA-201ENST00000262018 CIRBPQ14011 172 aaKnown RBP8.88□□□□□ -0.99
SGCA-201ENST00000262018 SS18Q15532 418 aa8.88□□□□□ -0.99
SGCA-201ENST00000262018 IGHV3OR16-9A0A0B4J2B5 98 aa8.87□□□□□ -0.99
SGCA-201ENST00000262018 DNAH10OSP0CZ25 163 aa8.87□□□□□ -0.99
SGCA-201ENST00000262018 HERV-K104P63124 156 aa8.87□□□□□ -0.99
SGCA-201ENST00000262018 LINC00269Q8N2A0 174 aa8.87□□□□□ -0.99
SGCA-201ENST00000262018 Q8N3U1 123 aa8.87□□□□□ -0.99
SGCA-201ENST00000262018 SPANXDQ9BXN6 97 aa8.87□□□□□ -0.99
SGCA-201ENST00000262018 SPANXCQ9NY87 97 aa8.87□□□□□ -0.99
SGCA-201ENST00000262018 K7EP13 123 aa8.86□□□□□ -0.99
SGCA-201ENST00000262018 NDUFA1O15239 70 aa8.86□□□□□ -0.99
SGCA-201ENST00000262018 IGHV3-30P01768 117 aa8.86□□□□□ -0.99
SGCA-201ENST00000262018 ANGP03950 147 aaKnown RBP8.86□□□□□ -0.99
SGCA-201ENST00000262018 IGHV3-30-5P0DP03 117 aa8.86□□□□□ -0.99
SGCA-201ENST00000262018 A0A0B4J2C4 111 aa8.85□□□□□ -0.99
SGCA-201ENST00000262018 REG3AQ06141 175 aa8.85□□□□□ -0.99
SGCA-201ENST00000262018 LINC01561Q8N1V8 128 aa8.85□□□□□ -0.99
SGCA-201ENST00000262018 C10orf126Q8N4M7 172 aa8.85□□□□□ -0.99
SGCA-201ENST00000262018 NDUFA12Q9UI09 145 aa8.85□□□□□ -0.99
SGCA-201ENST00000262018 SPCS1Q9Y6A9 102 aa8.85□□□□□ -0.99
SGCA-201ENST00000262018 A0A087WTM6 91 aa8.84□□□□□ -0.99
SGCA-201ENST00000262018 A0A087WZ39 114 aa8.84□□□□□ -0.99
SGCA-201ENST00000262018 PLA2G1BP04054 148 aaKnown RBP8.84□□□□□ -0.99
SGCA-201ENST00000262018 CLPSL2Q6UWE3 100 aa8.84□□□□□ -0.99
SGCA-201ENST00000262018 PRR34Q9NV39 138 aa8.84□□□□□ -0.99
SGCA-201ENST00000262018 WFDC10BQ8IUB3 73 aa8.83□□□□□ -1
SGCA-201ENST00000262018 RAB37Q96AX2 223 aa8.83□□□□□ -1
SGCA-201ENST00000262018 TRBV20-1A0A075B6N2 111 aa8.82□□□□□ -1
SGCA-201ENST00000262018 CD164L2Q6UWJ8 174 aa8.82□□□□□ -1
SGCA-201ENST00000262018 F8W1H4 67 aa8.81□□□□□ -1
SGCA-201ENST00000262018 IGHV3-33P01772 117 aa8.81□□□□□ -1
SGCA-201ENST00000262018 XCL1P47992 114 aa8.81□□□□□ -1
SGCA-201ENST00000262018 C5orf38Q86SI9 138 aa8.81□□□□□ -1
SGCA-201ENST00000262018 CHCHD10Q8WYQ3 142 aaPredicted RBP8.81□□□□□ -1
SGCA-201ENST00000262018 PRO1854Q9UHT4 67 aa8.81□□□□□ -1
SGCA-201ENST00000262018 KLK12Q9UKR0 248 aa8.81□□□□□ -1
SGCA-201ENST00000262018 MIAQ16674 131 aa8.8□□□□□ -1
SGCA-201ENST00000262018 ENHOQ6UWT2 76 aa8.8□□□□□ -1
SGCA-201ENST00000262018 COX7B2Q8TF08 81 aa8.8□□□□□ -1
SGCA-201ENST00000262018 LRP1Q07954 4544 aaKnown RBP8.8□□□□□ -1
SGCA-201ENST00000262018 LINC01556Q5JQF7 62 aa8.8□□□□□ -1
SGCA-201ENST00000262018 ZNF625Q96I27 306 aaPredicted RBP8.8□□□□□ -1
SGCA-201ENST00000262018 LITAFQ99732 161 aa8.8□□□□□ -1
SGCA-201ENST00000262018 TRAV8-4A0A0B4J246 113 aa8.79□□□□□ -1
SGCA-201ENST00000262018 K7ERU9 68 aa8.79□□□□□ -1
SGCA-201ENST00000262018 FOXI1Q12951 378 aa8.79□□□□□ -1
SGCA-201ENST00000262018 IGLV10-54A0A075B6I4 117 aa8.78□□□□□ -1
SGCA-201ENST00000262018 COX7A2LO14548 114 aa8.78□□□□□ -1
SGCA-201ENST00000262018 CRPP02741 224 aa8.78□□□□□ -1
SGCA-201ENST00000262018 RNF213Q63HN8 5207 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms