RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 MTURNQ8N3F0 131 aa12.25□□□□□ -0.45
CBX1-201ENST00000225603 ANGP03950 147 aaKnown RBP12.24□□□□□ -0.45
CBX1-201ENST00000225603 LINC00269Q8N2A0 174 aa12.24□□□□□ -0.45
CBX1-201ENST00000225603 CCL18P55774 89 aa12.23□□□□□ -0.45
CBX1-201ENST00000225603 ERG28Q9UKR5 140 aa12.23□□□□□ -0.45
CBX1-201ENST00000225603 Q9H8V8 135 aa12.22□□□□□ -0.45
CBX1-201ENST00000225603 KLK5Q9Y337 293 aaPredicted RBP12.22□□□□□ -0.45
CBX1-201ENST00000225603 STARD9Q9P2P6 4700 aa12.22□□□□□ -0.45
CBX1-201ENST00000225603 TRBV20-1A0A075B6N2 111 aa12.22□□□□□ -0.45
CBX1-201ENST00000225603 TCL1BO95988 128 aa12.22□□□□□ -0.45
CBX1-201ENST00000225603 KLK12Q9UKR0 248 aa12.22□□□□□ -0.45
CBX1-201ENST00000225603 PLECQ15149 4684 aaKnown RBP12.21□□□□□ -0.45
CBX1-201ENST00000225603 LINC00959A0A1B0GUT2 108 aa12.21□□□□□ -0.46
CBX1-201ENST00000225603 H7C2G1 150 aa12.21□□□□□ -0.46
CBX1-201ENST00000225603 SCGB1C2P0DMR2 95 aa12.21□□□□□ -0.46
CBX1-201ENST00000225603 IFITM1P13164 125 aa12.2□□□□□ -0.46
CBX1-201ENST00000225603 NPC2P61916 151 aa12.2□□□□□ -0.46
CBX1-201ENST00000225603 ETDBQ3ZM63 59 aa12.2□□□□□ -0.46
CBX1-201ENST00000225603 REG3AQ06141 175 aa12.19□□□□□ -0.46
CBX1-201ENST00000225603 CIRBPQ14011 172 aaKnown RBP12.19□□□□□ -0.46
CBX1-201ENST00000225603 TENM2Q9NT68 2774 aa12.19□□□□□ -0.46
CBX1-201ENST00000225603 LINC01556Q5JQF7 62 aa12.19□□□□□ -0.46
CBX1-201ENST00000225603 SMCPP49901 116 aaPredicted RBP12.18□□□□□ -0.46
CBX1-201ENST00000225603 DAND5Q8N907 189 aa12.18□□□□□ -0.46
CBX1-201ENST00000225603 ZNF625Q96I27 306 aaPredicted RBP12.18□□□□□ -0.46
CBX1-201ENST00000225603 LYSTQ99698 3801 aa12.18□□□□□ -0.46
CBX1-201ENST00000225603 DNAH10OSP0CZ25 163 aa12.18□□□□□ -0.46
CBX1-201ENST00000225603 Q1RN00 199 aa12.18□□□□□ -0.46
CBX1-201ENST00000225603 ENHOQ6UWT2 76 aa12.18□□□□□ -0.46
CBX1-201ENST00000225603 MUC7Q8TAX7 377 aa12.18□□□□□ -0.46
CBX1-201ENST00000225603 UPK3BQ9BT76 320 aa12.17□□□□□ -0.46
CBX1-201ENST00000225603 PRR34Q9NV39 138 aa12.17□□□□□ -0.46
CBX1-201ENST00000225603 IGLV10-54A0A075B6I4 117 aa12.16□□□□□ -0.46
CBX1-201ENST00000225603 UBE2WQ96B02 151 aa12.15□□□□□ -0.46
CBX1-201ENST00000225603 XCL1P47992 114 aa12.15□□□□□ -0.46
CBX1-201ENST00000225603 HERV-K104P63124 156 aa12.15□□□□□ -0.46
CBX1-201ENST00000225603 WWC2-AS2Q96NR7 200 aa12.15□□□□□ -0.46
CBX1-201ENST00000225603 SS18Q15532 418 aa12.14□□□□□ -0.47
CBX1-201ENST00000225603 LINC00308Q8TCZ7 52 aa12.14□□□□□ -0.47
CBX1-201ENST00000225603 TRBV30A0A0K0K1B3 111 aa12.14□□□□□ -0.47
CBX1-201ENST00000225603 IGHV3OR16-9A0A0B4J2B5 98 aa12.13□□□□□ -0.47
CBX1-201ENST00000225603 TRIAP1O43715 76 aa12.13□□□□□ -0.47
CBX1-201ENST00000225603 UBE2DNLQ8IWF7 75 aa12.13□□□□□ -0.47
CBX1-201ENST00000225603 J3QR89 54 aa12.13□□□□□ -0.47
CBX1-201ENST00000225603 MEIG1Q5JSS6 88 aa12.13□□□□□ -0.47
CBX1-201ENST00000225603 CHCHD10Q8WYQ3 142 aaPredicted RBP12.13□□□□□ -0.47
CBX1-201ENST00000225603 A0A0U1RRA0 63 aa12.12□□□□□ -0.47
CBX1-201ENST00000225603 C5orf38Q86SI9 138 aa12.11□□□□□ -0.47
CBX1-201ENST00000225603 COX7B2Q8TF08 81 aa12.11□□□□□ -0.47
CBX1-201ENST00000225603 CRPP02741 224 aa12.11□□□□□ -0.47
CBX1-201ENST00000225603 PCP4P48539 62 aa12.11□□□□□ -0.47
CBX1-201ENST00000225603 COPS9Q8WXC6 57 aa12.11□□□□□ -0.47
CBX1-201ENST00000225603 RPL13AP40429 203 aaKnown RBP12.1□□□□□ -0.47
CBX1-201ENST00000225603 SOSTDC1Q6X4U4 206 aa12.1□□□□□ -0.47
CBX1-201ENST00000225603 A0A087WZ39 114 aa12.09□□□□□ -0.47
CBX1-201ENST00000225603 ATXN8Q156A1 80 aa12.09□□□□□ -0.47
CBX1-201ENST00000225603 CD164L2Q6UWJ8 174 aa12.09□□□□□ -0.47
CBX1-201ENST00000225603 DNAH1Q9P2D7 4330 aa12.08□□□□□ -0.48
CBX1-201ENST00000225603 FOXI1Q12951 378 aa12.08□□□□□ -0.48
CBX1-201ENST00000225603 GAGE12HA6NDE8 117 aa12.07□□□□□ -0.48
CBX1-201ENST00000225603 KRTAP1-5Q9BYS1 174 aa12.07□□□□□ -0.48
CBX1-201ENST00000225603 TOMM7Q9P0U1 55 aa12.07□□□□□ -0.48
CBX1-201ENST00000225603 IBA57-AS1B1ANH7 110 aa12.07□□□□□ -0.48
CBX1-201ENST00000225603 C9JAW5 83 aa12.07□□□□□ -0.48
CBX1-201ENST00000225603 KRTAP26-1Q6PEX3 210 aa12.07□□□□□ -0.48
CBX1-201ENST00000225603 TEN1Q86WV5 123 aa12.07□□□□□ -0.48
CBX1-201ENST00000225603 SLC25A20O43772 301 aa12.06□□□□□ -0.48
CBX1-201ENST00000225603 Q9HAA7 133 aa12.06□□□□□ -0.48
CBX1-201ENST00000225603 TRAV8-4A0A0B4J246 113 aa12.06□□□□□ -0.48
CBX1-201ENST00000225603 CASC10Q5T4H9 136 aa12.06□□□□□ -0.48
CBX1-201ENST00000225603 PPDPFQ9H3Y8 114 aa12.06□□□□□ -0.48
CBX1-201ENST00000225603 M0QXV9 152 aa12.05□□□□□ -0.48
CBX1-201ENST00000225603 COX6CP09669 75 aa12.05□□□□□ -0.48
CBX1-201ENST00000225603 LINC01620Q4KN68 170 aa12.05□□□□□ -0.48
CBX1-201ENST00000225603 VPS13DQ5THJ4 4388 aa12.04□□□□□ -0.48
CBX1-201ENST00000225603 COX7A2LO14548 114 aa12.03□□□□□ -0.48
CBX1-201ENST00000225603 ANKRD29Q8N6D5 301 aa12.03□□□□□ -0.48
CBX1-201ENST00000225603 PPDPFLQ8WWR9 84 aa12.03□□□□□ -0.48
CBX1-201ENST00000225603 CARD19Q96LW7 228 aa12.03□□□□□ -0.48
CBX1-201ENST00000225603 IGKV2D-24A0A075B6R9 120 aa12.02□□□□□ -0.48
CBX1-201ENST00000225603 C21orf62-AS1Q17RA5 79 aa12.02□□□□□ -0.48
CBX1-201ENST00000225603 C1orf43Q9BWL3 253 aa12.02□□□□□ -0.49
CBX1-201ENST00000225603 MIR7-3HGQ8N6C7 128 aa12.01□□□□□ -0.49
CBX1-201ENST00000225603 CLEC2BQ92478 149 aa12.01□□□□□ -0.49
CBX1-201ENST00000225603 TRBV10-2A0A0K0K1G8 114 aa12□□□□□ -0.49
CBX1-201ENST00000225603 LINC01600Q96MT4 127 aa12□□□□□ -0.49
CBX1-201ENST00000225603 LST1O00453 97 aa11.99□□□□□ -0.49
CBX1-201ENST00000225603 MALP21145 153 aa11.99□□□□□ -0.49
CBX1-201ENST00000225603 LINC00158P58513 81 aa11.99□□□□□ -0.49
CBX1-201ENST00000225603 LINC01561Q8N1V8 128 aa11.99□□□□□ -0.49
CBX1-201ENST00000225603 C3orf84H3BNL1 204 aa11.98□□□□□ -0.49
CBX1-201ENST00000225603 NBDYA0A0U1RRE5 68 aa11.97□□□□□ -0.49
CBX1-201ENST00000225603 C6orf226Q5I0X4 101 aa11.97□□□□□ -0.49
CBX1-201ENST00000225603 Q8IZM0 81 aa11.96□□□□□ -0.49
CBX1-201ENST00000225603 KIAA0087Q14695 138 aa11.95□□□□□ -0.5
CBX1-201ENST00000225603 LINC00526Q96FQ7 95 aa11.95□□□□□ -0.5
CBX1-201ENST00000225603 SND1-IT1Q9HBX3 110 aa11.95□□□□□ -0.5
CBX1-201ENST00000225603 TRAV13-2A0A0B4J235 113 aa11.94□□□□□ -0.5
CBX1-201ENST00000225603 M0R2N4 97 aa11.94□□□□□ -0.5
CBX1-201ENST00000225603 PFN2P35080 140 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms