RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 E130218I03RikA0A0U1RNU5 63 aa7.71□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Nat8b-psE0CYC6 232 aa7.71□□□□□ -1.18
Scn8a-213ENSMUST00000201549 P04219 140 aa7.71□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Prh1P05142 261 aa7.71□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Nckap5E9QAE1 1909 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Prr15Q9D1T5 122 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Trav6d-5A0A075B6B9 112 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Gm21616B6ZB74 166 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Gm26727M0QWT1 121 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Ccl2P10148 148 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Foxl1Q64731 336 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Ros1Q78DX7 2340 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 P01634 136 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Rnf115Q9D0C1 305 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Rnf114Q9ET26 229 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Iglv3A0A0B4J1K5 122 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Igkv4-61A0A0G2JH00 117 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Dkk1O54908 272 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Iglc3P01845 104 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Mpv17P19258 176 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Gm1553Q66VB7 94 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 LgalslbQ7TPX9 165 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Wdr82Q8BFQ4 313 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Q8VE95 218 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Olfr223Q8VF69 319 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 TracA0A075B662 137 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 TcraP01849 138 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 AdmP97297 184 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Xaf1Q5NBU8 273 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Znf474Q6V5K9 347 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Rnf126Q91YL2 313 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Ssbp2Q9CYZ8 361 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Tmem170aQ9D342 144 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Tnfrsf13cQ9D8D0 175 aa7.7□□□□□ -1.18
Scn8a-213ENSMUST00000201549 A0A286YE02 88 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 E430018J23RikE9PZQ8 461 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Csrp2P97314 193 aaKnown RBP7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 GalmQ8K157 342 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Mrpl16Q99N93 251 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Igh-3P01867 404 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Spink8Q09TK9 105 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Rspo3Q2TJ95 277 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Foxg1Q60987 481 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 B230307C23RikQ8BLB2 64 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Klf13Q9JJZ6 289 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Cd5lQ9QWK4 352 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Gm11110Q3U4K9 109 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 C1ql4Q4ZJM9 238 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Trav15-1-dv6-1Q5R1D2 117 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Sec11aQ9R0P6 179 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Gm20219A0A1B0GRQ3 87 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Foxh1O88621 401 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Fgf4P11403 202 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Gata1P17679 413 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Olfr365Q8VFT2 312 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Atp6v0bQ91V37 205 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Gm21775J3KMK6 180 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Gm21874J3QNZ6 232 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Cox6cQ9CPQ1 76 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Znf385cA2A5E6 429 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 TtrP07309 147 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Hist1h2bfP10853 126 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Hist1h2bbQ64475 126 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Hist1h2bkQ8CGP1 126 aaKnown RBP7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Hist1h2bpQ8CGP2 126 aaKnown RBP7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 1700074P13RikQ9D9G7 251 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Egr4Q9WUF2 478 aa7.69□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Med12A2AGH6 2190 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Igkv4-54A0A0G2JES9 117 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Ighv14-2A0A075B5R7 117 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Igkv4-78A0A0A6YYE5 119 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 CrygsO35486 178 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Olfr553Q7TRS6 326 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Znf641Q8BZ34 422 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Mgst3Q9CPU4 153 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Ighv1-47A0A0A6YY41 117 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Fam19a2Q7TPG7 131 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Snx22Q8C084 192 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Hist3h2bbQ8CGP0 126 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Bpifa5Q9CQX3 270 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Hist3h2baQ9D2U9 126 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 BC030500E9Q6W0 185 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Hoxd3P09027 433 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 HrkP62816 92 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Hspe1Q64433 102 aaKnown RBP7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 EppinQ9DA01 134 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Zfp976E9Q981 636 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Spint5J3KMK8 105 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Rnase9P60154 184 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Trav3-3Q5R1C3 114 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Znf740Q6NZQ6 180 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Nrn1Q8CFV4 142 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Mrpl27Q99N92 148 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Wdr31Q9JHB4 367 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Trbv12-1A0A0B4J1H0 124 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Igkv4-74A0A0B4J1I3 119 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Igkv4-63A0A0G2JFU6 117 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 SeleQ00690 612 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Tex36Q9D5N9 219 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Hils1Q9QYL0 170 aa7.68□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 55.4 ms