RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 P01792 123 aa10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Slc25a5P51881 298 aaKnown RBP10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Ube2g1P62254 170 aa10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 RanP62827 216 aaKnown RBP10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Atp6v0cP63082 155 aa10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 SlpiP97430 131 aa10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Wipf2Q6PEV3 440 aa10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Znf474Q6V5K9 347 aa10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 RpeQ8VEE0 228 aa10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Olfr262Q8VFV8 312 aa10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Fbxl15Q91W61 300 aa10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Fam162bQ9CX19 157 aa10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Gng10Q9CXP8 68 aa10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Q9DAZ5 108 aa10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Susd2Q9DBX3 820 aa10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Trbv31A0A075B5J5 111 aa10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Gm6096D3YTY6 151 aa10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 P01726 129 aa10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 HrkP62816 92 aa10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Txn2P97493 166 aa10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Olfr745Q7TRL9 328 aa10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Tmem189Q99LQ7 271 aa10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Pdzd11Q9CZG9 140 aa10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Fam208bQ5DTT3 2382 aa10.52□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 DspE9Q557 2883 aaKnown RBP10.52□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Ighv1-77A0A0G2JGS9 117 aa10.52□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Foxi3E0CZH3 425 aa10.52□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 S100a10P08207 97 aa10.52□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Tmem256Q5F285 113 aa10.52□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 C130073F10RikQ8C4L8 201 aa10.52□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Tmed6Q9CQG0 239 aa10.52□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Q9CX25 107 aa10.52□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 V1ra8Q9EQ48 279 aa10.52□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Ncoa6Q9JL19 2067 aa10.51□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Lama5Q61001 3718 aa10.51□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Brs3O54798 399 aa10.51□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Crip1P63254 77 aa10.51□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 RprmlQ3URD2 117 aa10.51□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Igfbpl1Q80W15 270 aa10.51□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Fam206aQ80ZQ9 193 aaKnown RBP10.51□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Eda2rQ8BX35 297 aa10.51□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Q8C3M9 231 aa10.51□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Olfr982Q8VGB3 321 aa10.51□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Chchd1Q9CQA6 118 aa10.51□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 ManfQ9CXI5 179 aaKnown RBP10.51□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Tmem88Q9D0N8 159 aa10.51□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Trappc2lQ9JME7 139 aa10.51□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Ttc28Q80XJ3 2450 aa10.51□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 AcacbE9Q4Z2 2448 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Tcrg-C2A0A075B5Z2 167 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 BC030500E9Q6W0 185 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Scgb2a2J3KMP9 96 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 DdtO35215 118 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Ebi3O35228 228 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 P01853 167 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 MgpP19788 104 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Twist1P26687 206 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Rab24P35290 203 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Olfr149Q60888 311 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Olfr16Q62007 309 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Rasl11aQ6IMB1 242 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Ndufv3Q8BK30 104 aaKnown RBP10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Olfr1323Q8VF35 309 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Olfr1256Q8VGP1 306 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Cbln1Q9R171 193 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Ighv1-20A0A0A6YX66 117 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Gm37388A0A0A6YY46 143 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Olfr1369-ps1A0A140T8K7 317 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Gm14325A2AW67 498 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Tmem139E9PX92 214 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 9130204L05RikG3UWB8 92 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 NdpP48744 131 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Pde6hP61249 83 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Defb30Q30KN4 75 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Zfp92Q62396 488 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Bpifb3Q80ZU7 473 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Stxbp6Q8R3T5 210 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Olfr810Q8VFH9 312 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Cxcl14Q9WUQ5 99 aa10.5□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Trav7n-4A0A075B620 113 aa10.49□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Klf12O35738 402 aa10.49□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Olfr15P23275 312 aa10.49□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Ripply2Q2WG76 128 aa10.49□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 V1rd19Q3KNP5 305 aa10.49□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Gm16686Q3UMN9 131 aa10.49□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Smim9Q3V0X1 137 aa10.49□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Olfr1380Q7TQT5 311 aa10.49□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 4930474N05RikQ8BVR5 218 aa10.49□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Zmat4Q8BZ94 229 aa10.49□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Gm17334Q8C6U3 126 aa10.49□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Habp2Q8K0D2 558 aa10.49□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 RfxapQ8VCG9 231 aa10.49□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Vamp5Q9Z2P8 102 aa10.49□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Trav12d-3A0A075B6A4 115 aa10.48□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Ighv3-4A0A0A6YXF1 117 aa10.48□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Trav23A0A0G2JG17 115 aa10.48□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Gm9925F6T2U3 160 aa10.48□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 1700056E22RikF7CNM6 234 aa10.48□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Gm26965M0QWH4 86 aa10.48□□□□□ -0.73
Pdlim5-208ENSMUST00000196220 Pafah1b2Q61206 229 aa10.48□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 94.2 ms