RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Vmn1r61W4VSP5 300 aa12.53□□□□□ -0.4
Trim39-203ENSMUST00000113706 Lynx1P0DP60 116 aa12.52□□□□□ -0.4
Trim39-203ENSMUST00000113706 Timp3P39876 211 aa12.52□□□□□ -0.4
Trim39-203ENSMUST00000113706 Prrx2Q06348 247 aa12.52□□□□□ -0.4
Trim39-203ENSMUST00000113706 Cnn1Q08091 297 aaKnown RBP12.52□□□□□ -0.4
Trim39-203ENSMUST00000113706 Utp20Q5XG71 2788 aaKnown RBP12.52□□□□□ -0.4
Trim39-203ENSMUST00000113706 Tmem29A2ANF5 204 aa12.52□□□□□ -0.41
Trim39-203ENSMUST00000113706 Ypel3P61237 119 aa12.52□□□□□ -0.41
Trim39-203ENSMUST00000113706 Crebl2Q32M00 123 aa12.52□□□□□ -0.41
Trim39-203ENSMUST00000113706 Gm16686Q3UMN9 131 aa12.52□□□□□ -0.41
Trim39-203ENSMUST00000113706 Tmem208Q9CR96 173 aa12.52□□□□□ -0.41
Trim39-203ENSMUST00000113706 CklfQ9DAS1 152 aa12.52□□□□□ -0.41
Trim39-203ENSMUST00000113706 Arpc1aQ9R0Q6 370 aa12.52□□□□□ -0.41
Trim39-203ENSMUST00000113706 Olfr1326-ps1A0A140T8J7 311 aa12.52□□□□□ -0.41
Trim39-203ENSMUST00000113706 Olfr218E9PWV2 313 aa12.52□□□□□ -0.41
Trim39-203ENSMUST00000113706 Zfand3Q497H0 227 aa12.52□□□□□ -0.41
Trim39-203ENSMUST00000113706 Prss3Q792Z0 246 aaKnown RBP12.52□□□□□ -0.41
Trim39-203ENSMUST00000113706 Ighv1-20A0A0A6YX66 117 aa12.51□□□□□ -0.41
Trim39-203ENSMUST00000113706 Stfa1P35175 97 aa12.51□□□□□ -0.41
Trim39-203ENSMUST00000113706 Saxo2Q8BQB6 394 aa12.51□□□□□ -0.41
Trim39-203ENSMUST00000113706 Gm12689Q8BQU9 117 aa12.51□□□□□ -0.41
Trim39-203ENSMUST00000113706 Cbln1Q9R171 193 aa12.51□□□□□ -0.41
Trim39-203ENSMUST00000113706 Trav23A0A0G2JG17 115 aa12.51□□□□□ -0.41
Trim39-203ENSMUST00000113706 Rnf212F6TQD1 307 aa12.51□□□□□ -0.41
Trim39-203ENSMUST00000113706 Trav15-1-dv6-1Q5R1D2 117 aa12.51□□□□□ -0.41
Trim39-203ENSMUST00000113706 Fam206aQ80ZQ9 193 aaKnown RBP12.51□□□□□ -0.41
Trim39-203ENSMUST00000113706 Immp2lQ8BPT6 175 aa12.51□□□□□ -0.41
Trim39-203ENSMUST00000113706 Pf4Q9Z126 105 aa12.51□□□□□ -0.41
Trim39-203ENSMUST00000113706 Ccl1P10146 92 aa12.5□□□□□ -0.41
Trim39-203ENSMUST00000113706 Oosp2Q4FZG8 168 aa12.5□□□□□ -0.41
Trim39-203ENSMUST00000113706 Btf3l4Q9CQH7 158 aaKnown RBP12.5□□□□□ -0.41
Trim39-203ENSMUST00000113706 EppinQ9DA01 134 aa12.5□□□□□ -0.41
Trim39-203ENSMUST00000113706 P01726 129 aa12.5□□□□□ -0.41
Trim39-203ENSMUST00000113706 Rnase9P60154 184 aa12.5□□□□□ -0.41
Trim39-203ENSMUST00000113706 Oraov1Q8CH62 137 aa12.5□□□□□ -0.41
Trim39-203ENSMUST00000113706 9130204L05RikG3UWB8 92 aa12.5□□□□□ -0.41
Trim39-203ENSMUST00000113706 Mamld1P0C6A2 803 aa12.5□□□□□ -0.41
Trim39-203ENSMUST00000113706 SrstQ06666 185 aa12.5□□□□□ -0.41
Trim39-203ENSMUST00000113706 Olfr823Q7TRH2 315 aa12.5□□□□□ -0.41
Trim39-203ENSMUST00000113706 Rgs13Q8K443 158 aa12.5□□□□□ -0.41
Trim39-203ENSMUST00000113706 Olfr824Q8VFU4 315 aa12.5□□□□□ -0.41
Trim39-203ENSMUST00000113706 Mgst1Q91VS7 155 aa12.5□□□□□ -0.41
Trim39-203ENSMUST00000113706 Necap2Q9D1J1 266 aa12.5□□□□□ -0.41
Trim39-203ENSMUST00000113706 V1ra8Q9EQ48 279 aa12.5□□□□□ -0.41
Trim39-203ENSMUST00000113706 Trav9-1A0A075B601 112 aa12.49□□□□□ -0.41
Trim39-203ENSMUST00000113706 Thap8E9Q695 213 aa12.49□□□□□ -0.41
Trim39-203ENSMUST00000113706 HrkP62816 92 aa12.49□□□□□ -0.41
Trim39-203ENSMUST00000113706 Smim9Q3V0X1 137 aa12.49□□□□□ -0.41
Trim39-203ENSMUST00000113706 Cldn16Q925N4 235 aa12.49□□□□□ -0.41
Trim39-203ENSMUST00000113706 Cldn34c4A2ANA3 212 aa12.49□□□□□ -0.41
Trim39-203ENSMUST00000113706 Brs3O54798 399 aa12.49□□□□□ -0.41
Trim39-203ENSMUST00000113706 Zfp493E9Q1L8 384 aa12.49□□□□□ -0.41
Trim39-203ENSMUST00000113706 OstcQ78XF5 149 aa12.49□□□□□ -0.41
Trim39-203ENSMUST00000113706 Gng5Q80SZ7 68 aa12.49□□□□□ -0.41
Trim39-203ENSMUST00000113706 Urm1Q9D2P4 101 aa12.49□□□□□ -0.41
Trim39-203ENSMUST00000113706 HeylQ9DBX7 326 aa12.49□□□□□ -0.41
Trim39-203ENSMUST00000113706 Cxcr6Q9EQ16 351 aa12.49□□□□□ -0.41
Trim39-203ENSMUST00000113706 Tep1P97499 2629 aa12.48□□□□□ -0.41
Trim39-203ENSMUST00000113706 Gm21900J3QP38 180 aa12.48□□□□□ -0.41
Trim39-203ENSMUST00000113706 Q497N7 227 aa12.48□□□□□ -0.41
Trim39-203ENSMUST00000113706 Il31Q6EAL8 163 aa12.48□□□□□ -0.41
Trim39-203ENSMUST00000113706 RpeQ8VEE0 228 aa12.48□□□□□ -0.41
Trim39-203ENSMUST00000113706 Phxr2P15972 65 aa12.48□□□□□ -0.41
Trim39-203ENSMUST00000113706 Crip1P63254 77 aa12.48□□□□□ -0.41
Trim39-203ENSMUST00000113706 Vmn1r195Q5SVD6 316 aa12.48□□□□□ -0.41
Trim39-203ENSMUST00000113706 OpalinQ7M750 143 aa12.48□□□□□ -0.41
Trim39-203ENSMUST00000113706 Olfr715Q8VG49 315 aa12.48□□□□□ -0.41
Trim39-203ENSMUST00000113706 Slc25a2Q99ML6 265 aa12.48□□□□□ -0.41
Trim39-203ENSMUST00000113706 Pard6aQ9Z101 346 aa12.48□□□□□ -0.41
Trim39-203ENSMUST00000113706 Ccl12Q62401 104 aa12.47□□□□□ -0.41
Trim39-203ENSMUST00000113706 Olfr433Q7TRV9 314 aa12.47□□□□□ -0.41
Trim39-203ENSMUST00000113706 Slamf7Q8BHK6 333 aa12.47□□□□□ -0.41
Trim39-203ENSMUST00000113706 Olfr262Q8VFV8 312 aa12.47□□□□□ -0.41
Trim39-203ENSMUST00000113706 Cela2aP05208 271 aa12.47□□□□□ -0.41
Trim39-203ENSMUST00000113706 S100a10P08207 97 aa12.47□□□□□ -0.41
Trim39-203ENSMUST00000113706 Plp1P60202 277 aa12.47□□□□□ -0.41
Trim39-203ENSMUST00000113706 RanP62827 216 aaKnown RBP12.47□□□□□ -0.41
Trim39-203ENSMUST00000113706 Slc35b1P97858 322 aa12.47□□□□□ -0.41
Trim39-203ENSMUST00000113706 H2al1nQ497L1 109 aa12.47□□□□□ -0.41
Trim39-203ENSMUST00000113706 Eda2rQ8BX35 297 aa12.47□□□□□ -0.41
Trim39-203ENSMUST00000113706 Muc2Q80Z19 2680 aa12.47□□□□□ -0.41
Trim39-203ENSMUST00000113706 FlncQ8VHX6 2726 aaKnown RBP12.47□□□□□ -0.41
Trim39-203ENSMUST00000113706 Olfr15P23275 312 aa12.47□□□□□ -0.41
Trim39-203ENSMUST00000113706 Gatad1Q920S3 266 aa12.47□□□□□ -0.41
Trim39-203ENSMUST00000113706 Ms4a6bQ99N09 244 aa12.47□□□□□ -0.41
Trim39-203ENSMUST00000113706 Atp6v0e1Q9CQD8 81 aa12.47□□□□□ -0.41
Trim39-203ENSMUST00000113706 Crybb3Q9JJU9 211 aa12.47□□□□□ -0.41
Trim39-203ENSMUST00000113706 Pilrb2Q2YFS1 225 aa12.46□□□□□ -0.41
Trim39-203ENSMUST00000113706 RfxapQ8VCG9 231 aa12.46□□□□□ -0.41
Trim39-203ENSMUST00000113706 Qrich2A0A140LIY9 2337 aa12.46□□□□□ -0.42
Trim39-203ENSMUST00000113706 Ighv3-1A0A075B5S6 116 aa12.46□□□□□ -0.42
Trim39-203ENSMUST00000113706 Trav7-4A0A075B6C1 113 aa12.46□□□□□ -0.42
Trim39-203ENSMUST00000113706 Trav7d-4Q5R1H9 113 aa12.46□□□□□ -0.42
Trim39-203ENSMUST00000113706 Megf9Q8BH27 600 aa12.46□□□□□ -0.42
Trim39-203ENSMUST00000113706 Olfr1009Q8VFK1 314 aa12.46□□□□□ -0.42
Trim39-203ENSMUST00000113706 Abca2P41234 2434 aa12.46□□□□□ -0.42
Trim39-203ENSMUST00000113706 Trav12d-3A0A075B6A4 115 aa12.45□□□□□ -0.42
Trim39-203ENSMUST00000113706 Habp2Q8K0D2 558 aa12.45□□□□□ -0.42
Trim39-203ENSMUST00000113706 Olfr1323Q8VF35 309 aa12.45□□□□□ -0.42
Trim39-203ENSMUST00000113706 ManfQ9CXI5 179 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 96.3 ms