RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Ighv7-3A0A075B5R2 120 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Olfr905L7N1X5 310 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Rpl27aP14115 148 aaKnown RBP5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 LtbP41155 306 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Rtl4Q3URY0 304 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 2810408A11RikQ6NSU2 435 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Vma21Q78T54 101 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 C1qtnf5Q8K479 243 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Olfr1454Q8VFW2 307 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Ube2v1Q9CZY3 147 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Q9DAL9 119 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Crlf1Q9JM58 425 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Bhlha15Q9QYC3 197 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Spint5J3KMK8 105 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Fam240aJ3QNP9 97 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 MpzP27573 248 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 F7P70375 446 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Serf2P84102 59 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Arrdc5Q497K5 325 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Foxc2Q61850 494 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Vkorc1l1Q6TEK5 176 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Znrd1Q791N7 123 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Il22ra1Q80XZ4 581 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Olfr1228Q8VGM9 323 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Rer1Q9CQU3 196 aaKnown RBP5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Tmem170aQ9D342 144 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Erg28Q9ERY9 140 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Fhl3Q9R059 289 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Trav16A0A075B653 116 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Vmn1r128L7N2B4 307 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 P04212 136 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 ErhP84089 104 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Shisal1Q0VBP7 198 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Parp16Q7TMM8 322 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Poc1aQ8JZX3 405 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Olfr559Q8VH14 318 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Polr3kQ9CQZ7 108 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm21913J3KML9 361 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Cldn34c3J3QJW5 233 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Cldn34c2J3QNM1 233 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm21776J3QPJ5 361 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 OsmP53347 263 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Cldn34c1Q8K193 234 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Spsb4Q8R5B6 273 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Olfr1183Q8VFF8 303 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 PerpQ9JK95 193 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Timm23Q9WTQ8 209 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm28171A0A087WQ19 227 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm28269A0A087WSG3 125 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 A930017K11RikE0CXQ2 571 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 NrepQ07475 68 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Nbl1Q61477 178 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Spink10Q8CAC8 162 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Olfr1012Q8VFJ7 311 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Olfr982Q8VGB3 321 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Fam241aQ9CZL2 131 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Vmn1r50Q9EP51 310 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Fgf16Q9ESL8 207 aa5.6□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Zfp950A0A0U1RQ46 609 aa5.59□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm7849D3YX03 116 aa5.59□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm10036E9PYL9 178 aaKnown RBP5.59□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Slc17a3G3UWD9 498 aa5.59□□□□□ -1.51
Bdnf-201ENSMUST00000053317 LfngO09010 378 aa5.59□□□□□ -1.51
Bdnf-201ENSMUST00000053317 P06323 132 aa5.59□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Ear1P97426 155 aa5.59□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Tmem256Q5F285 113 aa5.59□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Rasl11aQ6IMB1 242 aa5.59□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Higd1cQ76I25 96 aa5.59□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Olfr1204Q7TR10 309 aa5.59□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Timm21Q8CCM6 249 aa5.59□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Ercc8Q8CFD5 397 aa5.59□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Rbpms2Q8VC52 206 aaKnown RBP5.59□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Ociad1Q9CRD0 247 aaKnown RBP5.59□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Hspb9Q9DAM3 168 aa5.59□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Sdf2l1Q9ESP1 221 aa5.59□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm13030A2APQ6 143 aa5.59□□□□□ -1.51
Bdnf-201ENSMUST00000053317 4931422A03RikA2BHN9 113 aa5.59□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Ca11O70354 328 aa5.59□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Ssty1P13675 232 aa5.59□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Stpg2Q8C8J0 561 aa5.59□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Olfr1199Q8VF94 310 aa5.59□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Rpl11Q9CXW4 178 aaKnown RBP5.59□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Ammecr1Q9JHT5 344 aaKnown RBP5.59□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Olfr175-ps1A0A140T8K4 308 aa5.59□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm4744D3Z3S5 154 aa5.59□□□□□ -1.52
Bdnf-201ENSMUST00000053317 E430018J23RikE9PZQ8 461 aa5.59□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Lgals9O08573 353 aaKnown RBP5.59□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Insl3O09107 122 aa5.59□□□□□ -1.52
Bdnf-201ENSMUST00000053317 P01643 108 aa5.59□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Oprk1P33534 380 aa5.59□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Cd81P35762 236 aa5.59□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Sssca1P56873 199 aa5.59□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Atp6v0cP63082 155 aa5.59□□□□□ -1.52
Bdnf-201ENSMUST00000053317 MyocosQ3UWS6 143 aa5.59□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Taar4Q5QD15 347 aa5.59□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gpx2Q9JHC0 190 aa5.59□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm12728V9GX31 77 aa5.59□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Ighv14-2A0A075B5R7 117 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm45785A0A1B0GT05 94 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 1700025C18RikA2A580 89 aa5.58□□□□□ -1.52
Retrieved 100 of 22,080 RNA–protein pairs in 108 ms