RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Tas2r114Q7M722 309 aa11.23□□□□□ -0.61
Ercc1-201ENSMUST00000003645 LgalslbQ7TPX9 165 aa11.23□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Pef1Q8BFY6 275 aa11.23□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Phf13Q8K2W6 296 aa11.23□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Olfr810Q8VFH9 312 aa11.23□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Olfr1002Q8VFK2 318 aa11.23□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Olfr1086Q8VFL9 310 aa11.23□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Tmem70Q921N7 253 aa11.23□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Rchy1Q9CR50 261 aa11.23□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Gm21060J3KMU4 56 aa11.22□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Pax2P32114 414 aa11.22□□□□□ -0.61
Ercc1-201ENSMUST00000003645 V1rd19Q3KNP5 305 aa11.22□□□□□ -0.61
Ercc1-201ENSMUST00000003645 SbsnQ8CIT9 700 aa11.22□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Vmn1r225Q8R2A5 298 aa11.22□□□□□ -0.61
Ercc1-201ENSMUST00000003645 RTRAFQ9CQE8 244 aa11.22□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Ighv1-52A0A0A6YXC3 117 aa11.21□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Gm20773A0A0A6YXW2 232 aa11.21□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Gm20807A0A0A6YXX7 232 aa11.21□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Cyb561d1A2AE42 229 aa11.21□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Znf431E9QAG8 526 aa11.21□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Gm20873J3QMQ9 232 aa11.21□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Gm20795J3QP49 232 aa11.21□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Gm10553J3QPF1 123 aa11.21□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Gm21310J3QQ23 232 aa11.21□□□□□ -0.61
Ercc1-201ENSMUST00000003645 P01789 122 aa11.21□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Cxcl2P10889 100 aa11.21□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Gm21440Q3TTD8 232 aa11.21□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Trat1Q3UU67 187 aa11.21□□□□□ -0.61
Ercc1-201ENSMUST00000003645 C1ql4Q4ZJM9 238 aa11.21□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Vmn1r195Q5SVD6 316 aa11.21□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Olfr148Q60887 310 aa11.21□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Rbm38Q62176 237 aaKnown RBP11.21□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Slc35d2Q762D5 326 aa11.21□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Nhlrc1Q8BR37 401 aa11.21□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Olfr1256Q8VGP1 306 aa11.21□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Med28Q920D3 178 aa11.21□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Map1lc3bQ9CQV6 125 aa11.21□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Susd2Q9DBX3 820 aa11.21□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Wfdc15bQ9JHY4 80 aa11.21□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Fbxl17Q9QZN1 701 aa11.21□□□□□ -0.61
Ercc1-201ENSMUST00000003645 AU041133A0A0J9YVH3 498 aa11.2□□□□□ -0.62
Ercc1-201ENSMUST00000003645 IgipA0A1B0GR74 53 aa11.2□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Cldn34c4A2ANA3 212 aa11.2□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Cox6b1P56391 86 aaKnown RBP11.2□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Foxc2Q61850 494 aa11.2□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Hyls1Q9CXX0 307 aa11.2□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Cmtm2bQ9DAC0 210 aa11.2□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Trappc2lQ9JME7 139 aa11.2□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Bub3Q9WVA3 326 aa11.2□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Wnk1P83741 2377 aa11.2□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Samt1A2BED8 237 aa11.19□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Tmem262D3Z338 116 aa11.19□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Olfr913E9Q716 312 aa11.19□□□□□ -0.62
Ercc1-201ENSMUST00000003645 P01787 123 aa11.19□□□□□ -0.62
Ercc1-201ENSMUST00000003645 P01792 123 aa11.19□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Atp6v0cP63082 155 aa11.19□□□□□ -0.62
Ercc1-201ENSMUST00000003645 1700009N14RikQ14AA6 216 aaKnown RBP11.19□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Smim19Q80ZU4 107 aa11.19□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Slc25a29Q8BL03 306 aa11.19□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Ufc1Q9CR09 167 aa11.19□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Xirp2Q4U4S6 3784 aa11.19□□□□□ -0.62
Ercc1-201ENSMUST00000003645 AtrQ9JKK8 2635 aa11.18□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Csn1s2bP02664 143 aa11.18□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Runx1Q03347 451 aa11.18□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Znf48Q3US17 591 aa11.18□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Psmb6Q60692 238 aa11.18□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Tmem205Q91XE8 189 aa11.18□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Q9CQT9 129 aa11.18□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Tmem183Q9JJB9 375 aa11.18□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Esm1Q9QYY7 184 aa11.18□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Gpr132Q9Z282 382 aa11.18□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Igkv1-131A0A140T8M8 120 aa11.17□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Irf2bp2E9Q1P8 570 aa11.17□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Zfp708F8VPP0 541 aa11.17□□□□□ -0.62
Ercc1-201ENSMUST00000003645 A830031A19RikQ8BNT5 113 aa11.17□□□□□ -0.62
Ercc1-201ENSMUST00000003645 PgpQ8CHP8 321 aa11.17□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Olfr577Q8VH11 312 aa11.17□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Sorl1O88307 2215 aaKnown RBP11.17□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Igkv4-59A0A0B4J1I8 117 aa11.16□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Gm2564F6Z9S8 108 aa11.16□□□□□ -0.62
Ercc1-201ENSMUST00000003645 A930009A15RikG3UYI6 118 aa11.16□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Ccl19O70460 108 aa11.16□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Khdc1bP0C7A0 126 aa11.16□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Ssty1P13675 232 aa11.16□□□□□ -0.62
Ercc1-201ENSMUST00000003645 BC100530Q497J0 97 aa11.16□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Wfdc17Q5SSJ1 76 aa11.16□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Q8C708 225 aa11.16□□□□□ -0.62
Ercc1-201ENSMUST00000003645 A130051J06RikQ8CAU1 227 aa11.16□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Olfr830Q8VFJ5 315 aa11.16□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Cma2Q91VB1 246 aa11.16□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Fbxo24Q9D417 589 aa11.16□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Avpi1Q9D7H4 142 aa11.16□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Spata3Q9D9T6 193 aa11.16□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Scp2d1Q9DAH1 156 aa11.16□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Rhox4bQ9JI43 205 aa11.16□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Tsc22d3Q9Z2S7 137 aa11.16□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Nsd1O88491 2588 aaKnown RBP11.16□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Gpm6bP35803 328 aa11.16□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Slc35b1P97858 322 aa11.16□□□□□ -0.62
Ercc1-201ENSMUST00000003645 Olfr1445Q8VFW9 314 aa11.16□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms