RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 DGAT2L7PQ6IED9 249 aa7.16□□□□□ -1.26
PHGDH-224ENST00000641711 DEFB131BA0A096LNP1 70 aa7.15□□□□□ -1.26
PHGDH-224ENST00000641711 H3BUT2 72 aa7.15□□□□□ -1.26
PHGDH-224ENST00000641711 TMEM243Q9BU79 118 aa7.15□□□□□ -1.26
PHGDH-224ENST00000641711 NHP2Q9NX24 153 aaKnown RBP7.15□□□□□ -1.26
PHGDH-224ENST00000641711 TMEM238LA0A1B0GVL6 79 aa7.14□□□□□ -1.27
PHGDH-224ENST00000641711 A0A1W2PPM0 123 aa7.14□□□□□ -1.27
PHGDH-224ENST00000641711 A6NJY4 79 aa7.14□□□□□ -1.27
PHGDH-224ENST00000641711 IGHV3-30-3P0DP02 117 aa7.14□□□□□ -1.27
PHGDH-224ENST00000641711 DEFB130BP0DP73 79 aa7.14□□□□□ -1.27
PHGDH-224ENST00000641711 DEFB130AP0DP74 79 aa7.14□□□□□ -1.27
PHGDH-224ENST00000641711 GTF2H5Q6ZYL4 71 aa7.14□□□□□ -1.27
PHGDH-224ENST00000641711 VSIG2Q96IQ7 327 aa7.14□□□□□ -1.27
PHGDH-224ENST00000641711 GEMIN7Q9H840 131 aaKnown RBP7.14□□□□□ -1.27
PHGDH-224ENST00000641711 CDC42SE2Q9NRR3 84 aa7.14□□□□□ -1.27
PHGDH-224ENST00000641711 H3BNG1 76 aa7.13□□□□□ -1.27
PHGDH-224ENST00000641711 K7EP34 96 aa7.13□□□□□ -1.27
PHGDH-224ENST00000641711 K7ERJ3 54 aa7.13□□□□□ -1.27
PHGDH-224ENST00000641711 LCE2BO14633 110 aa7.13□□□□□ -1.27
PHGDH-224ENST00000641711 IGHV3-30P01768 117 aa7.13□□□□□ -1.27
PHGDH-224ENST00000641711 IGHV3-30-5P0DP03 117 aa7.13□□□□□ -1.27
PHGDH-224ENST00000641711 HERVK_113P63121 156 aa7.13□□□□□ -1.27
PHGDH-224ENST00000641711 SRSF9Q13242 221 aaKnown RBP eCLIP7.13□□□□□ -1.27
PHGDH-224ENST00000641711 RNASE13Q5GAN3 156 aaKnown RBP7.13□□□□□ -1.27
PHGDH-224ENST00000641711 C15orf53Q8NAA6 179 aa7.13□□□□□ -1.27
PHGDH-224ENST00000641711 RAB37Q96AX2 223 aa7.13□□□□□ -1.27
PHGDH-224ENST00000641711 TENM2Q9NT68 2774 aa7.13□□□□□ -1.27
PHGDH-224ENST00000641711 LOC100131303A0A0U1RQF7 123 aa7.12□□□□□ -1.27
PHGDH-224ENST00000641711 GAGE10A6NGK3 116 aa7.12□□□□□ -1.27
PHGDH-224ENST00000641711 IGLL5B9A064 214 aa7.12□□□□□ -1.27
PHGDH-224ENST00000641711 FABP2P12104 132 aa7.12□□□□□ -1.27
PHGDH-224ENST00000641711 LINC00242Q5T6M2 205 aa7.12□□□□□ -1.27
PHGDH-224ENST00000641711 ZFAND6Q6FIF0 208 aa7.12□□□□□ -1.27
PHGDH-224ENST00000641711 CSMD3Q7Z407 3707 aa7.12□□□□□ -1.27
PHGDH-224ENST00000641711 TRBV6-8A0A0A6YYG3 113 aa7.11□□□□□ -1.27
PHGDH-224ENST00000641711 IGLV5-39A0A0G2JS06 123 aa7.11□□□□□ -1.27
PHGDH-224ENST00000641711 A0A0J9YXY3 114 aa7.11□□□□□ -1.27
PHGDH-224ENST00000641711 UBE2L6O14933 153 aa7.11□□□□□ -1.27
PHGDH-224ENST00000641711 C10orf126Q8N4M7 172 aa7.11□□□□□ -1.27
PHGDH-224ENST00000641711 TMEM101Q96IK0 257 aa7.11□□□□□ -1.27
PHGDH-224ENST00000641711 IGHV3-64A0A075B6Q5 118 aa7.1□□□□□ -1.27
PHGDH-224ENST00000641711 TRAV8-3A0A0A6YYJ7 113 aa7.1□□□□□ -1.27
PHGDH-224ENST00000641711 TMEM238C9JI98 176 aa7.1□□□□□ -1.27
PHGDH-224ENST00000641711 F5H768 121 aa7.1□□□□□ -1.27
PHGDH-224ENST00000641711 TIMM17BO60830 172 aa7.1□□□□□ -1.27
PHGDH-224ENST00000641711 CDKN2A-AS1Q9UH64 79 aa7.1□□□□□ -1.27
PHGDH-224ENST00000641711 PRO0255Q9UI72 69 aa7.1□□□□□ -1.27
PHGDH-224ENST00000641711 SPCS1Q9Y6A9 102 aa7.1□□□□□ -1.27
PHGDH-224ENST00000641711 SPINK8P0C7L1 97 aa7.09□□□□□ -1.27
PHGDH-224ENST00000641711 HTN3P15516 51 aa7.09□□□□□ -1.27
PHGDH-224ENST00000641711 SMCPP49901 116 aaPredicted RBP7.09□□□□□ -1.27
PHGDH-224ENST00000641711 COX6A2Q02221 97 aa7.09□□□□□ -1.27
PHGDH-224ENST00000641711 LITAFQ99732 161 aa7.09□□□□□ -1.27
PHGDH-224ENST00000641711 NAA38Q9BRA0 125 aaKnown RBP7.09□□□□□ -1.27
PHGDH-224ENST00000641711 NDUFA12Q9UI09 145 aa7.09□□□□□ -1.27
PHGDH-224ENST00000641711 NDUFA1O15239 70 aa7.08□□□□□ -1.28
PHGDH-224ENST00000641711 GYPEP15421 78 aa7.08□□□□□ -1.28
PHGDH-224ENST00000641711 ATP6V0E2Q8NHE4 81 aa7.08□□□□□ -1.28
PHGDH-224ENST00000641711 SPANXDQ9BXN6 97 aa7.08□□□□□ -1.28
PHGDH-224ENST00000641711 SPANXCQ9NY87 97 aa7.08□□□□□ -1.28
PHGDH-224ENST00000641711 APLNQ9ULZ1 77 aa7.08□□□□□ -1.28
PHGDH-224ENST00000641711 RPL24P83731 157 aaKnown RBP7.07□□□□□ -1.28
PHGDH-224ENST00000641711 GAGE6Q13070 117 aa7.07□□□□□ -1.28
PHGDH-224ENST00000641711 STARD9Q9P2P6 4700 aa7.07□□□□□ -1.28
PHGDH-224ENST00000641711 TRAV26-1A0A087WT03 109 aa7.06□□□□□ -1.28
PHGDH-224ENST00000641711 TRAV13-1A0A0B4J241 112 aa7.06□□□□□ -1.28
PHGDH-224ENST00000641711 A0A0B4J2C4 111 aa7.06□□□□□ -1.28
PHGDH-224ENST00000641711 A0A1B0GUV1 79 aa7.06□□□□□ -1.28
PHGDH-224ENST00000641711 SMIM1B2RUZ4 78 aa7.06□□□□□ -1.28
PHGDH-224ENST00000641711 PAX4O43316 350 aa7.06□□□□□ -1.28
PHGDH-224ENST00000641711 CFC1BP0CG36 223 aa7.06□□□□□ -1.28
PHGDH-224ENST00000641711 CFC1P0CG37 223 aa7.06□□□□□ -1.28
PHGDH-224ENST00000641711 SH2D6Q7Z4S9 175 aa7.06□□□□□ -1.28
PHGDH-224ENST00000641711 CHCHD5Q9BSY4 110 aa7.06□□□□□ -1.28
PHGDH-224ENST00000641711 ICOSQ9Y6W8 199 aa7.06□□□□□ -1.28
PHGDH-224ENST00000641711 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.05□□□□□ -1.28
PHGDH-224ENST00000641711 LCE6AA0A183 80 aa7.05□□□□□ -1.28
PHGDH-224ENST00000641711 A4D1N5 150 aa7.05□□□□□ -1.28
PHGDH-224ENST00000641711 MRPL23Q16540 153 aaKnown RBP7.05□□□□□ -1.28
PHGDH-224ENST00000641711 MIAQ16674 131 aa7.05□□□□□ -1.28
PHGDH-224ENST00000641711 MUSTN1Q8IVN3 82 aa7.05□□□□□ -1.28
PHGDH-224ENST00000641711 LINC00476Q8WZB0 136 aa7.05□□□□□ -1.28
PHGDH-224ENST00000641711 PGPEP1Q9NXJ5 209 aa7.05□□□□□ -1.28
PHGDH-224ENST00000641711 DYNC2H1Q8NCM8 4307 aaKnown RBP7.04□□□□□ -1.28
PHGDH-224ENST00000641711 IGLV4-60A0A075B6I1 120 aa7.04□□□□□ -1.28
PHGDH-224ENST00000641711 TSPAN13O95857 204 aa7.04□□□□□ -1.28
PHGDH-224ENST00000641711 IFITM1P13164 125 aa7.04□□□□□ -1.28
PHGDH-224ENST00000641711 PPDPFQ9H3Y8 114 aa7.04□□□□□ -1.28
PHGDH-224ENST00000641711 PRO1854Q9UHT4 67 aa7.04□□□□□ -1.28
PHGDH-224ENST00000641711 APOMO95445 188 aa7.03□□□□□ -1.28
PHGDH-224ENST00000641711 HERV-K104P63124 156 aa7.03□□□□□ -1.28
PHGDH-224ENST00000641711 CIRBPQ14011 172 aaKnown RBP7.03□□□□□ -1.28
PHGDH-224ENST00000641711 ADAMTSL4-AS1Q5T5F5 129 aa7.03□□□□□ -1.28
PHGDH-224ENST00000641711 LYRM7Q5U5X0 104 aa7.03□□□□□ -1.28
PHGDH-224ENST00000641711 ZNF625Q96I27 306 aaPredicted RBP7.03□□□□□ -1.28
PHGDH-224ENST00000641711 IGHV3OR16-9A0A0B4J2B5 98 aa7.02□□□□□ -1.29
PHGDH-224ENST00000641711 EIF4EBP3O60516 100 aaPredicted RBP7.02□□□□□ -1.29
PHGDH-224ENST00000641711 CCL18P55774 89 aa7.02□□□□□ -1.29
PHGDH-224ENST00000641711 LINC01561Q8N1V8 128 aa7.02□□□□□ -1.29
PHGDH-224ENST00000641711 Q9H8V8 135 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 181.5 ms