RNA–Protein interactions for RNA: ENST00000638824.1

NEK1-209, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 3,642 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-209ENST00000638824 H3BNG1 76 aa1.99□□□□□ -2.09
NEK1-209ENST00000638824 FAM104BQ5XKR9 115 aa1.99□□□□□ -2.09
NEK1-209ENST00000638824 TMEM136Q6ZRR5 245 aa1.99□□□□□ -2.09
NEK1-209ENST00000638824 WFDC10BQ8IUB3 73 aa1.99□□□□□ -2.09
NEK1-209ENST00000638824 UBE2DNLQ8IWF7 75 aa1.99□□□□□ -2.09
NEK1-209ENST00000638824 ATP6V0E2Q8NHE4 81 aa1.99□□□□□ -2.09
NEK1-209ENST00000638824 ORAOV1Q8WV07 137 aa1.99□□□□□ -2.09
NEK1-209ENST00000638824 URB1-AS1Q96HZ7 61 aa1.99□□□□□ -2.09
NEK1-209ENST00000638824 PRAC1Q96KF2 57 aa1.99□□□□□ -2.09
NEK1-209ENST00000638824 FRAS1Q86XX4 4008 aa1.99□□□□□ -2.09
NEK1-209ENST00000638824 RYR3Q15413 4870 aa1.99□□□□□ -2.09
NEK1-209ENST00000638824 CDK2AP2O75956 126 aa1.99□□□□□ -2.09
NEK1-209ENST00000638824 NPYP01303 97 aa1.99□□□□□ -2.09
NEK1-209ENST00000638824 S100A2P29034 98 aa1.99□□□□□ -2.09
NEK1-209ENST00000638824 UBE2D3P61077 147 aa1.99□□□□□ -2.09
NEK1-209ENST00000638824 UBE2D2P62837 147 aa1.99□□□□□ -2.09
NEK1-209ENST00000638824 RPL36AP83881 106 aaKnown RBP1.99□□□□□ -2.09
NEK1-209ENST00000638824 PMVKQ15126 192 aa1.99□□□□□ -2.09
NEK1-209ENST00000638824 LYPD5Q6UWN5 251 aa1.99□□□□□ -2.09
NEK1-209ENST00000638824 NRACQ8N912 160 aa1.99□□□□□ -2.09
NEK1-209ENST00000638824 RPL36ALQ969Q0 106 aaKnown RBP1.99□□□□□ -2.09
NEK1-209ENST00000638824 PAM16Q9Y3D7 125 aa1.99□□□□□ -2.09
NEK1-209ENST00000638824 RYR2Q92736 4967 aa1.99□□□□□ -2.09
NEK1-209ENST00000638824 TRBV10-1A0A0K0K1A3 114 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 FAM236AA0A1B0GUQ0 79 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 FAM236BA0A1B0GV22 79 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 CKS2P33552 79 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 FABP9Q0Z7S8 132 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 SRSF9Q13242 221 aaKnown RBP eCLIP1.98□□□□□ -2.09
NEK1-209ENST00000638824 NTM-AS1Q6ZSK4 140 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 TMEM126AQ9H061 195 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 DNAH10Q8IVF4 4471 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 TRAV9-1A0A075B6T8 112 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 LCE6AA0A183 80 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 SDHAF1A6NFY7 115 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 M0R2N4 97 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 CCL18P55774 89 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 TTC32Q5I0X7 151 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 LCE5AQ5TCM9 118 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 Q6ZRU5 148 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 FRZBQ92765 325 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 KRTAP1-5Q9BYS1 174 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 SMCO4Q9NRQ5 59 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 TRBV24-1A0A075B6N3 115 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 TRAV8-6A0A0B4J262 113 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 APCSP02743 223 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 LGALS9CQ6DKI2 356 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 ORMDL3Q8N138 153 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 ANKRD29Q8N6D5 301 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 PRELID3AQ96N28 172 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 TMEM70Q9BUB7 260 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 MRPS16Q9Y3D3 137 aaKnown RBP1.98□□□□□ -2.09
NEK1-209ENST00000638824 DNAH6Q9C0G6 4158 aa1.98□□□□□ -2.09
NEK1-209ENST00000638824 TRBV6-8A0A0A6YYG3 113 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 LOC389332A0A1B0GUA5 103 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.97□□□□□ -2.09
NEK1-209ENST00000638824 TSHBP01222 138 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 IGHV3-30P01768 117 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 IGHV3-33P01772 117 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 HLA-DQA1P01909 254 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 IGHV3-30-3P0DP02 117 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 IGHV3-30-5P0DP03 117 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 FOXI1Q12951 378 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 IQCJQ1A5X6 159 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 ST20Q9HBF5 79 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 DNAH2Q9P225 4427 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 ZNF706Q9Y5V0 76 aaPredicted RBP1.97□□□□□ -2.09
NEK1-209ENST00000638824 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.97□□□□□ -2.09
NEK1-209ENST00000638824 TRBV6-5A0A0K0K1A5 114 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 IGKV2-29A2NJV5 120 aaPredicted RBP1.97□□□□□ -2.09
NEK1-209ENST00000638824 GAGE12HA6NDE8 117 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 COLCA2A8K830 154 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 NDUFS5O43920 106 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 PFN2P35080 140 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 MPV17L2Q567V2 206 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 LELP1Q5T871 98 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 LYRM7Q5U5X0 104 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 SH2D6Q7Z4S9 175 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 Q8N976 141 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 SMIM2Q9BVW6 85 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 TRAPPC1Q9Y5R8 145 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 TRBV27A0A0K0K1C4 114 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 A0A1B0GX51 115 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 C1orf196B1AJZ1 125 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 J3QQQ9 107 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 MT-ND6P03923 174 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 POLR2KP53803 58 aaKnown RBP1.97□□□□□ -2.09
NEK1-209ENST00000638824 CLPSL2Q6UWE3 100 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 CHCHD5Q9BSY4 110 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 UPK3BQ9BT76 320 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 TP73-AS1Q9UF72 201 aa1.97□□□□□ -2.09
NEK1-209ENST00000638824 TRBV25-1A0A075B6N4 114 aa1.96□□□□□ -2.1
NEK1-209ENST00000638824 IGHV1-24A0A0C4DH33 117 aa1.96□□□□□ -2.1
NEK1-209ENST00000638824 H0Y9J4 135 aa1.96□□□□□ -2.1
NEK1-209ENST00000638824 I3L3M4 83 aa1.96□□□□□ -2.1
NEK1-209ENST00000638824 TRGC2P03986 189 aa1.96□□□□□ -2.1
NEK1-209ENST00000638824 IFI27P40305 119 aaPredicted RBP1.96□□□□□ -2.1
NEK1-209ENST00000638824 RPS28P62857 69 aaKnown RBP1.96□□□□□ -2.1
NEK1-209ENST00000638824 RPL39P62891 51 aaKnown RBP1.96□□□□□ -2.1
NEK1-209ENST00000638824 C6orf99Q4VX62 202 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms