RNA–Protein interactions for RNA: ENST00000637941.1

TCF4-289, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 2,115 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-289ENST00000637941 SHISA2Q6UWI4 295 aa9.04□□□□□ -0.96
TCF4-289ENST00000637941 ZNF469Q96JG9 3925 aaPredicted RBP9.04□□□□□ -0.96
TCF4-289ENST00000637941 TENM4Q6N022 2769 aa9.04□□□□□ -0.96
TCF4-289ENST00000637941 TRAV13-2A0A0B4J235 113 aa9.04□□□□□ -0.96
TCF4-289ENST00000637941 GAGE7O76087 117 aa9.04□□□□□ -0.96
TCF4-289ENST00000637941 NDUFA7O95182 113 aa9.04□□□□□ -0.96
TCF4-289ENST00000637941 IGLV1-51P01701 117 aa9.04□□□□□ -0.96
TCF4-289ENST00000637941 TRACP01848 142 aa9.04□□□□□ -0.96
TCF4-289ENST00000637941 RNASE1P07998 156 aaKnown RBP9.04□□□□□ -0.96
TCF4-289ENST00000637941 GAGE12FP0CL80 117 aa9.04□□□□□ -0.96
TCF4-289ENST00000637941 GAGE12GP0CL81 117 aa9.04□□□□□ -0.96
TCF4-289ENST00000637941 GAGE12IP0CL82 117 aa9.04□□□□□ -0.96
TCF4-289ENST00000637941 FAM222AQ5U5X8 452 aa9.04□□□□□ -0.96
TCF4-289ENST00000637941 HIST2H2BDQ6DRA6 164 aa9.04□□□□□ -0.96
TCF4-289ENST00000637941 ESM1Q9NQ30 184 aa9.04□□□□□ -0.96
TCF4-289ENST00000637941 ACYP1P07311 99 aa9.03□□□□□ -0.96
TCF4-289ENST00000637941 COX7B2Q8TF08 81 aa9.03□□□□□ -0.96
TCF4-289ENST00000637941 MXRA5Q9NR99 2828 aa9.03□□□□□ -0.96
TCF4-289ENST00000637941 A0A0U1RRA0 63 aa9.02□□□□□ -0.96
TCF4-289ENST00000637941 PLAC8L1A1L4L8 177 aa9.02□□□□□ -0.96
TCF4-289ENST00000637941 GIG44P09565 113 aaPredicted RBP9.02□□□□□ -0.96
TCF4-289ENST00000637941 TTC32Q5I0X7 151 aa9.02□□□□□ -0.97
TCF4-289ENST00000637941 SOSTDC1Q6X4U4 206 aa9.02□□□□□ -0.97
TCF4-289ENST00000637941 C15orf53Q8NAA6 179 aa9.02□□□□□ -0.97
TCF4-289ENST00000637941 LINC01006Q8NI28 216 aa9.02□□□□□ -0.97
TCF4-289ENST00000637941 TEX15Q9BXT5 2789 aa9.02□□□□□ -0.97
TCF4-289ENST00000637941 RPL35AP18077 110 aaKnown RBP9.01□□□□□ -0.97
TCF4-289ENST00000637941 CRPP02741 224 aa9.01□□□□□ -0.97
TCF4-289ENST00000637941 TRBV6-8A0A0A6YYG3 113 aa9□□□□□ -0.97
TCF4-289ENST00000637941 CSNK1G2-AS1Q8NCQ2 148 aa9□□□□□ -0.97
TCF4-289ENST00000637941 C19orf73Q9NVV2 129 aa9□□□□□ -0.97
TCF4-289ENST00000637941 ITPR3Q14573 2671 aa9□□□□□ -0.97
TCF4-289ENST00000637941 MYO9AB2RTY4 2548 aa9□□□□□ -0.97
TCF4-289ENST00000637941 TRAV26-1A0A087WT03 109 aa8.99□□□□□ -0.97
TCF4-289ENST00000637941 SVIPQ8NHG7 77 aa8.99□□□□□ -0.97
TCF4-289ENST00000637941 GAGE6Q13070 117 aa8.99□□□□□ -0.97
TCF4-289ENST00000637941 RPL28P46779 137 aaKnown RBP8.98□□□□□ -0.97
TCF4-289ENST00000637941 NDUFV3P56181 108 aaKnown RBP8.98□□□□□ -0.97
TCF4-289ENST00000637941 CHCHD5Q9BSY4 110 aa8.98□□□□□ -0.97
TCF4-289ENST00000637941 ANK3Q12955 4377 aaKnown RBP8.98□□□□□ -0.97
TCF4-289ENST00000637941 LOC100131303A0A0U1RQF7 123 aa8.98□□□□□ -0.97
TCF4-289ENST00000637941 CRLF1O75462 422 aa8.98□□□□□ -0.97
TCF4-289ENST00000637941 FHL2Q14192 279 aa8.98□□□□□ -0.97
TCF4-289ENST00000637941 PDZD2O15018 2839 aa8.97□□□□□ -0.97
TCF4-289ENST00000637941 IBA57-AS1B1ANH7 110 aa8.97□□□□□ -0.97
TCF4-289ENST00000637941 CCDC168Q8NDH2 2452 aa8.97□□□□□ -0.97
TCF4-289ENST00000637941 MIR7-3HGQ8N6C7 128 aa8.96□□□□□ -0.97
TCF4-289ENST00000637941 KIR2DL5BQ8NHK3 375 aa8.96□□□□□ -0.97
TCF4-289ENST00000637941 WFDC10AQ9H1F0 79 aa8.96□□□□□ -0.97
TCF4-289ENST00000637941 SND1-IT1Q9HBX3 110 aa8.96□□□□□ -0.97
TCF4-289ENST00000637941 TOMM7Q9P0U1 55 aa8.96□□□□□ -0.97
TCF4-289ENST00000637941 A0A087WZ39 114 aa8.96□□□□□ -0.98
TCF4-289ENST00000637941 INAFM2P0DMQ5 153 aa8.96□□□□□ -0.98
TCF4-289ENST00000637941 WNK1Q9H4A3 2382 aa8.95□□□□□ -0.98
TCF4-289ENST00000637941 IGHV3OR16-9A0A0B4J2B5 98 aa8.95□□□□□ -0.98
TCF4-289ENST00000637941 BAALC-AS2P0C853 105 aa8.95□□□□□ -0.98
TCF4-289ENST00000637941 LINC00158P58513 81 aa8.95□□□□□ -0.98
TCF4-289ENST00000637941 HELZ2Q9BYK8 2649 aaKnown RBP8.95□□□□□ -0.98
TCF4-289ENST00000637941 TLN2Q9Y4G6 2542 aa8.94□□□□□ -0.98
TCF4-289ENST00000637941 IGLV4-60A0A075B6I1 120 aa8.94□□□□□ -0.98
TCF4-289ENST00000637941 IGKV3OR2-268A0A0C4DH90 116 aa8.94□□□□□ -0.98
TCF4-289ENST00000637941 TRBV7-7A0A0K0K1E9 115 aa8.94□□□□□ -0.98
TCF4-289ENST00000637941 H0YGX0 51 aa8.94□□□□□ -0.98
TCF4-289ENST00000637941 AKAP9Q99996 3911 aa8.94□□□□□ -0.98
TCF4-289ENST00000637941 FLNAP21333 2647 aaKnown RBP8.94□□□□□ -0.98
TCF4-289ENST00000637941 IMUPQ9GZP8 106 aa8.93□□□□□ -0.98
TCF4-289ENST00000637941 SONP18583 2426 aaKnown RBP8.93□□□□□ -0.98
TCF4-289ENST00000637941 SMIM9A6NGZ8 99 aa8.93□□□□□ -0.98
TCF4-289ENST00000637941 DNAL4O96015 105 aa8.93□□□□□ -0.98
TCF4-289ENST00000637941 HILS1P60008 231 aa8.93□□□□□ -0.98
TCF4-289ENST00000637941 SS18Q15532 418 aa8.93□□□□□ -0.98
TCF4-289ENST00000637941 LINC01561Q8N1V8 128 aa8.93□□□□□ -0.98
TCF4-289ENST00000637941 LINC00612Q8N6U2 182 aa8.92□□□□□ -0.98
TCF4-289ENST00000637941 LINC00959A0A1B0GUT2 108 aa8.92□□□□□ -0.98
TCF4-289ENST00000637941 A0A1B0GUV1 79 aa8.92□□□□□ -0.98
TCF4-289ENST00000637941 SMR3AQ99954 134 aa8.92□□□□□ -0.98
TCF4-289ENST00000637941 NHLRC4P0CG21 123 aaPredicted RBP8.91□□□□□ -0.98
TCF4-289ENST00000637941 MALP21145 153 aa8.91□□□□□ -0.98
TCF4-289ENST00000637941 LINC00337Q8N6G1 96 aa8.91□□□□□ -0.98
TCF4-289ENST00000637941 IGKV2-28A0A075B6P5 120 aa8.9□□□□□ -0.98
TCF4-289ENST00000637941 IGKV2D-28P01615 120 aa8.9□□□□□ -0.98
TCF4-289ENST00000637941 LINC00643Q86TS7 51 aa8.9□□□□□ -0.98
TCF4-289ENST00000637941 DEFB130BP0DP73 79 aa8.9□□□□□ -0.99
TCF4-289ENST00000637941 DEFB130AP0DP74 79 aa8.9□□□□□ -0.99
TCF4-289ENST00000637941 GYPEP15421 78 aa8.9□□□□□ -0.99
TCF4-289ENST00000637941 CCL18P55774 89 aa8.9□□□□□ -0.99
TCF4-289ENST00000637941 C6orf226Q5I0X4 101 aa8.9□□□□□ -0.99
TCF4-289ENST00000637941 FAM218AQ96MZ4 157 aa8.9□□□□□ -0.99
TCF4-289ENST00000637941 LY6G6DO95868 133 aa8.89□□□□□ -0.99
TCF4-289ENST00000637941 C5orf38Q86SI9 138 aa8.89□□□□□ -0.99
TCF4-289ENST00000637941 Q8IZM0 81 aa8.89□□□□□ -0.99
TCF4-289ENST00000637941 SMIM11BQ8TCY0 68 aa8.89□□□□□ -0.99
TCF4-289ENST00000637941 PRO0255Q9UI72 69 aa8.89□□□□□ -0.99
TCF4-289ENST00000637941 UNC79Q9P2D8 2635 aa8.89□□□□□ -0.99
TCF4-289ENST00000637941 PAX4O43316 350 aa8.88□□□□□ -0.99
TCF4-289ENST00000637941 PFN2P35080 140 aa8.87□□□□□ -0.99
TCF4-289ENST00000637941 ITPR2Q14571 2701 aa8.87□□□□□ -0.99
TCF4-289ENST00000637941 ACANP16112 2415 aa8.87□□□□□ -0.99
TCF4-289ENST00000637941 LYRM9A8MSI8 78 aa8.87□□□□□ -0.99
TCF4-289ENST00000637941 CXCL5P42830 114 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms