RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 GAGE7O76087 117 aa11.38□□□□□ -0.59
CHRNA7-221ENST00000636898 GAGE12FP0CL80 117 aa11.38□□□□□ -0.59
CHRNA7-221ENST00000636898 GAGE12GP0CL81 117 aa11.38□□□□□ -0.59
CHRNA7-221ENST00000636898 GAGE12IP0CL82 117 aa11.38□□□□□ -0.59
CHRNA7-221ENST00000636898 CKS1BP61024 79 aa11.38□□□□□ -0.59
CHRNA7-221ENST00000636898 CLEC2BQ92478 149 aa11.37□□□□□ -0.59
CHRNA7-221ENST00000636898 WFDC10AQ9H1F0 79 aa11.37□□□□□ -0.59
CHRNA7-221ENST00000636898 CUBNO60494 3623 aa11.36□□□□□ -0.59
CHRNA7-221ENST00000636898 SETXQ7Z333 2677 aaKnown RBP11.36□□□□□ -0.59
CHRNA7-221ENST00000636898 RPL35AP18077 110 aaKnown RBP11.36□□□□□ -0.59
CHRNA7-221ENST00000636898 MEIG1Q5JSS6 88 aa11.36□□□□□ -0.59
CHRNA7-221ENST00000636898 SOSTDC1Q6X4U4 206 aa11.36□□□□□ -0.59
CHRNA7-221ENST00000636898 CCDC168Q8NDH2 2452 aa11.35□□□□□ -0.59
CHRNA7-221ENST00000636898 TRGV4A0A0C4DH28 118 aa11.34□□□□□ -0.59
CHRNA7-221ENST00000636898 SHISA2Q6UWI4 295 aa11.34□□□□□ -0.59
CHRNA7-221ENST00000636898 LOC100131303A0A0U1RQF7 123 aa11.34□□□□□ -0.59
CHRNA7-221ENST00000636898 COX7A2LO14548 114 aa11.34□□□□□ -0.59
CHRNA7-221ENST00000636898 CITED1Q99966 193 aa11.34□□□□□ -0.59
CHRNA7-221ENST00000636898 TRAV8-4A0A0B4J246 113 aa11.33□□□□□ -0.6
CHRNA7-221ENST00000636898 A0A0U1RRA0 63 aa11.33□□□□□ -0.6
CHRNA7-221ENST00000636898 DEFB121Q5J5C9 76 aa11.33□□□□□ -0.6
CHRNA7-221ENST00000636898 FHL2Q14192 279 aa11.32□□□□□ -0.6
CHRNA7-221ENST00000636898 JMJD1CQ15652 2540 aa11.32□□□□□ -0.6
CHRNA7-221ENST00000636898 NOTCH3Q9UM47 2321 aa11.32□□□□□ -0.6
CHRNA7-221ENST00000636898 TRBV6-8A0A0A6YYG3 113 aa11.32□□□□□ -0.6
CHRNA7-221ENST00000636898 NIPBLQ6KC79 2804 aaeCLIP11.31□□□□□ -0.6
CHRNA7-221ENST00000636898 FAM240AA0A1B0GVK7 77 aa11.31□□□□□ -0.6
CHRNA7-221ENST00000636898 HILS1P60008 231 aa11.31□□□□□ -0.6
CHRNA7-221ENST00000636898 COX7B2Q8TF08 81 aa11.31□□□□□ -0.6
CHRNA7-221ENST00000636898 SNCGO76070 127 aa11.3□□□□□ -0.6
CHRNA7-221ENST00000636898 PF4P02776 101 aa11.3□□□□□ -0.6
CHRNA7-221ENST00000636898 SETD2Q9BYW2 2564 aaPredicted RBP11.3□□□□□ -0.6
CHRNA7-221ENST00000636898 GAGE6Q13070 117 aa11.29□□□□□ -0.6
CHRNA7-221ENST00000636898 PDZD2O15018 2839 aa11.29□□□□□ -0.6
CHRNA7-221ENST00000636898 C2CD3Q4AC94 2353 aa11.29□□□□□ -0.6
CHRNA7-221ENST00000636898 FAM222AQ5U5X8 452 aa11.29□□□□□ -0.6
CHRNA7-221ENST00000636898 ANK3Q12955 4377 aaKnown RBP11.29□□□□□ -0.6
CHRNA7-221ENST00000636898 IGHV3OR16-9A0A0B4J2B5 98 aa11.28□□□□□ -0.6
CHRNA7-221ENST00000636898 KIR2DL5BQ8NHK3 375 aa11.28□□□□□ -0.6
CHRNA7-221ENST00000636898 TRACP01848 142 aa11.28□□□□□ -0.6
CHRNA7-221ENST00000636898 HIST2H2BCQ6DN03 193 aa11.28□□□□□ -0.6
CHRNA7-221ENST00000636898 IGLV4-60A0A075B6I1 120 aa11.27□□□□□ -0.61
CHRNA7-221ENST00000636898 TRAV13-2A0A0B4J235 113 aa11.27□□□□□ -0.61
CHRNA7-221ENST00000636898 MRPL23Q16540 153 aaKnown RBP11.27□□□□□ -0.61
CHRNA7-221ENST00000636898 CHCHD5Q9BSY4 110 aa11.27□□□□□ -0.61
CHRNA7-221ENST00000636898 TENM4Q6N022 2769 aa11.26□□□□□ -0.61
CHRNA7-221ENST00000636898 PLA2G2AP14555 144 aa11.26□□□□□ -0.61
CHRNA7-221ENST00000636898 Q6Q795 121 aa11.26□□□□□ -0.61
CHRNA7-221ENST00000636898 LINC00612Q8N6U2 182 aa11.26□□□□□ -0.61
CHRNA7-221ENST00000636898 A0A087WZ39 114 aa11.26□□□□□ -0.61
CHRNA7-221ENST00000636898 GAGE2BQ13066 116 aa11.26□□□□□ -0.61
CHRNA7-221ENST00000636898 GAGE2EQ4V326 116 aa11.26□□□□□ -0.61
CHRNA7-221ENST00000636898 GAGE2DQ9UEU5 116 aa11.26□□□□□ -0.61
CHRNA7-221ENST00000636898 MIR7-3HGQ8N6C7 128 aa11.24□□□□□ -0.61
CHRNA7-221ENST00000636898 ACANP16112 2415 aa11.24□□□□□ -0.61
CHRNA7-221ENST00000636898 CRLF1O75462 422 aa11.24□□□□□ -0.61
CHRNA7-221ENST00000636898 RPL28P46779 137 aaKnown RBP11.24□□□□□ -0.61
CHRNA7-221ENST00000636898 IBA57-AS1B1ANH7 110 aa11.23□□□□□ -0.61
CHRNA7-221ENST00000636898 CRPP02741 224 aa11.23□□□□□ -0.61
CHRNA7-221ENST00000636898 C15orf53Q8NAA6 179 aa11.23□□□□□ -0.61
CHRNA7-221ENST00000636898 TOMM7Q9P0U1 55 aa11.23□□□□□ -0.61
CHRNA7-221ENST00000636898 MTORP42345 2549 aa11.23□□□□□ -0.61
CHRNA7-221ENST00000636898 IGKV3OR2-268A0A0C4DH90 116 aa11.23□□□□□ -0.61
CHRNA7-221ENST00000636898 SND1-IT1Q9HBX3 110 aa11.22□□□□□ -0.61
CHRNA7-221ENST00000636898 ACYP1P07311 99 aa11.21□□□□□ -0.61
CHRNA7-221ENST00000636898 DEFB130BP0DP73 79 aa11.21□□□□□ -0.61
CHRNA7-221ENST00000636898 DEFB130AP0DP74 79 aa11.21□□□□□ -0.61
CHRNA7-221ENST00000636898 ANAPC13Q9BS18 74 aa11.21□□□□□ -0.61
CHRNA7-221ENST00000636898 LINC00959A0A1B0GUT2 108 aa11.21□□□□□ -0.62
CHRNA7-221ENST00000636898 LINC00482Q8N8I6 264 aa11.21□□□□□ -0.62
CHRNA7-221ENST00000636898 IGKV2-28A0A075B6P5 120 aa11.2□□□□□ -0.62
CHRNA7-221ENST00000636898 A0A1B0GUV1 79 aa11.2□□□□□ -0.62
CHRNA7-221ENST00000636898 SMIM9A6NGZ8 99 aa11.2□□□□□ -0.62
CHRNA7-221ENST00000636898 IGKV2D-28P01615 120 aa11.2□□□□□ -0.62
CHRNA7-221ENST00000636898 LINC00337Q8N6G1 96 aa11.2□□□□□ -0.62
CHRNA7-221ENST00000636898 LINC00158P58513 81 aa11.2□□□□□ -0.62
CHRNA7-221ENST00000636898 GYPEP15421 78 aa11.19□□□□□ -0.62
CHRNA7-221ENST00000636898 BAALC-AS2P0C853 105 aa11.18□□□□□ -0.62
CHRNA7-221ENST00000636898 FAM218AQ96MZ4 157 aa11.18□□□□□ -0.62
CHRNA7-221ENST00000636898 TRAV26-1A0A087WT03 109 aa11.18□□□□□ -0.62
CHRNA7-221ENST00000636898 CCL18P55774 89 aa11.18□□□□□ -0.62
CHRNA7-221ENST00000636898 NDUFV3P56181 108 aaKnown RBP11.18□□□□□ -0.62
CHRNA7-221ENST00000636898 KRTAP10-3P60369 221 aa11.18□□□□□ -0.62
CHRNA7-221ENST00000636898 C5orf38Q86SI9 138 aa11.18□□□□□ -0.62
CHRNA7-221ENST00000636898 X6R8D5 127 aa11.18□□□□□ -0.62
CHRNA7-221ENST00000636898 ITPR2Q14571 2701 aa11.17□□□□□ -0.62
CHRNA7-221ENST00000636898 PRO0255Q9UI72 69 aa11.17□□□□□ -0.62
CHRNA7-221ENST00000636898 TTC32Q5I0X7 151 aa11.16□□□□□ -0.62
CHRNA7-221ENST00000636898 LINC01561Q8N1V8 128 aa11.16□□□□□ -0.62
CHRNA7-221ENST00000636898 SS18Q15532 418 aa11.16□□□□□ -0.62
CHRNA7-221ENST00000636898 NHLRC4P0CG21 123 aaPredicted RBP11.15□□□□□ -0.63
CHRNA7-221ENST00000636898 C6orf226Q5I0X4 101 aa11.15□□□□□ -0.63
CHRNA7-221ENST00000636898 Q8IZM0 81 aa11.15□□□□□ -0.63
CHRNA7-221ENST00000636898 SMIM11BQ8TCY0 68 aa11.15□□□□□ -0.63
CHRNA7-221ENST00000636898 C22orf24Q9Y442 160 aa11.15□□□□□ -0.63
CHRNA7-221ENST00000636898 LYRM9A8MSI8 78 aa11.14□□□□□ -0.63
CHRNA7-221ENST00000636898 H0YGX0 51 aa11.14□□□□□ -0.63
CHRNA7-221ENST00000636898 J3QKU1 62 aa11.14□□□□□ -0.63
CHRNA7-221ENST00000636898 TRBV7-7A0A0K0K1E9 115 aa11.13□□□□□ -0.63
CHRNA7-221ENST00000636898 INAFM2P0DMQ5 153 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms