RNA–Protein interactions for RNA: ENST00000636661.1

CLCN2-215, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 4,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-215ENST00000636661 LINC01006Q8NI28 216 aa11.92□□□□□ -0.5
CLCN2-215ENST00000636661 NDUFV3P56181 108 aaKnown RBP11.92□□□□□ -0.5
CLCN2-215ENST00000636661 ODF3L2Q3SX64 289 aa11.91□□□□□ -0.5
CLCN2-215ENST00000636661 hADV29S1A0JD25 119 aa11.91□□□□□ -0.5
CLCN2-215ENST00000636661 ZNF292O60281 2723 aa11.91□□□□□ -0.5
CLCN2-215ENST00000636661 FRYLO94915 3013 aa11.91□□□□□ -0.5
CLCN2-215ENST00000636661 RBMY1FQ15415 496 aaKnown RBP11.9□□□□□ -0.5
CLCN2-215ENST00000636661 UBE2D1P51668 147 aa11.9□□□□□ -0.5
CLCN2-215ENST00000636661 REG3AQ06141 175 aa11.9□□□□□ -0.5
CLCN2-215ENST00000636661 ZNF843Q8N446 348 aa11.9□□□□□ -0.5
CLCN2-215ENST00000636661 BBC3Q96PG8 261 aaPredicted RBP11.9□□□□□ -0.5
CLCN2-215ENST00000636661 XAGE1AQ9HD64 81 aa11.9□□□□□ -0.5
CLCN2-215ENST00000636661 MGAM2Q2M2H8 2515 aa11.89□□□□□ -0.51
CLCN2-215ENST00000636661 MAST4O15021 2626 aa11.89□□□□□ -0.51
CLCN2-215ENST00000636661 MRPS36P82909 103 aaKnown RBP11.89□□□□□ -0.51
CLCN2-215ENST00000636661 SDIM1Q6ZPB5 146 aa11.89□□□□□ -0.51
CLCN2-215ENST00000636661 CHCHD10Q8WYQ3 142 aaPredicted RBP11.89□□□□□ -0.51
CLCN2-215ENST00000636661 LINC00643Q86TS7 51 aa11.88□□□□□ -0.51
CLCN2-215ENST00000636661 UBE2BP63146 152 aa11.87□□□□□ -0.51
CLCN2-215ENST00000636661 LINC00242Q5T6M2 205 aa11.87□□□□□ -0.51
CLCN2-215ENST00000636661 LINC00694P0DN24 101 aa11.87□□□□□ -0.51
CLCN2-215ENST00000636661 ADAMTSL4-AS1Q5T5F5 129 aa11.87□□□□□ -0.51
CLCN2-215ENST00000636661 Q6ZSN1 163 aa11.87□□□□□ -0.51
CLCN2-215ENST00000636661 INAFM1C9JVW0 142 aa11.86□□□□□ -0.51
CLCN2-215ENST00000636661 RBM3P98179 157 aaKnown RBP11.86□□□□□ -0.51
CLCN2-215ENST00000636661 TRBV6-4A0A1B0GX49 114 aa11.86□□□□□ -0.51
CLCN2-215ENST00000636661 EYSQ5T1H1 3165 aa11.86□□□□□ -0.51
CLCN2-215ENST00000636661 ETDCA0A1B0GVM5 59 aa11.85□□□□□ -0.51
CLCN2-215ENST00000636661 JMJD7-PLA2G4BH0Y9G9 81 aa11.85□□□□□ -0.51
CLCN2-215ENST00000636661 ATOX1O00244 68 aa11.85□□□□□ -0.51
CLCN2-215ENST00000636661 LRRC75A-AS1Q8N1F1 130 aa11.85□□□□□ -0.51
CLCN2-215ENST00000636661 LST1O00453 97 aa11.85□□□□□ -0.51
CLCN2-215ENST00000636661 TRAV23DV6A0A075B6W5 121 aa11.84□□□□□ -0.51
CLCN2-215ENST00000636661 FAM110AQ9BQ89 295 aa11.84□□□□□ -0.51
CLCN2-215ENST00000636661 H7C423 109 aa11.84□□□□□ -0.51
CLCN2-215ENST00000636661 CXCL5P42830 114 aa11.84□□□□□ -0.51
CLCN2-215ENST00000636661 COX6A2Q02221 97 aa11.84□□□□□ -0.51
CLCN2-215ENST00000636661 CFAP46Q8IYW2 2715 aa11.84□□□□□ -0.51
CLCN2-215ENST00000636661 SPATA25Q9BR10 227 aa11.83□□□□□ -0.51
CLCN2-215ENST00000636661 IBA57-AS1B1ANH7 110 aa11.83□□□□□ -0.52
CLCN2-215ENST00000636661 C6orf99Q4VX62 202 aa11.83□□□□□ -0.52
CLCN2-215ENST00000636661 DIRC1Q969H9 104 aa11.83□□□□□ -0.52
CLCN2-215ENST00000636661 SPANXDQ9BXN6 97 aa11.83□□□□□ -0.52
CLCN2-215ENST00000636661 BOD1L1Q8NFC6 3051 aa11.83□□□□□ -0.52
CLCN2-215ENST00000636661 TMEM256-PLSCR3K7ERE1 68 aa11.83□□□□□ -0.52
CLCN2-215ENST00000636661 CDC42SE2Q9NRR3 84 aa11.83□□□□□ -0.52
CLCN2-215ENST00000636661 SMR3AQ99954 134 aa11.82□□□□□ -0.52
CLCN2-215ENST00000636661 PRB2P02812 416 aaPredicted RBP11.81□□□□□ -0.52
CLCN2-215ENST00000636661 KIF25-AS1Q9Y6Z4 181 aa11.81□□□□□ -0.52
CLCN2-215ENST00000636661 PLA2G2AP14555 144 aa11.81□□□□□ -0.52
CLCN2-215ENST00000636661 CHCHD7Q9BUK0 85 aa11.81□□□□□ -0.52
CLCN2-215ENST00000636661 C1orf158Q8N1D5 194 aa11.81□□□□□ -0.52
CLCN2-215ENST00000636661 UBE2D3P61077 147 aa11.8□□□□□ -0.52
CLCN2-215ENST00000636661 UBE2D2P62837 147 aa11.8□□□□□ -0.52
CLCN2-215ENST00000636661 Q9UF83 564 aa11.8□□□□□ -0.52
CLCN2-215ENST00000636661 NREPQ16612 68 aa11.79□□□□□ -0.52
CLCN2-215ENST00000636661 FLNAP21333 2647 aaKnown RBP11.79□□□□□ -0.52
CLCN2-215ENST00000636661 LINC00959A0A1B0GUT2 108 aa11.79□□□□□ -0.52
CLCN2-215ENST00000636661 SMIM1B2RUZ4 78 aa11.79□□□□□ -0.52
CLCN2-215ENST00000636661 SMIM11BQ8TCY0 68 aa11.79□□□□□ -0.52
CLCN2-215ENST00000636661 TIMM17BO60830 172 aa11.79□□□□□ -0.52
CLCN2-215ENST00000636661 CCL18P55774 89 aa11.79□□□□□ -0.52
CLCN2-215ENST00000636661 SCXQ7RTU7 201 aa11.79□□□□□ -0.52
CLCN2-215ENST00000636661 RMI2Q96E14 147 aa11.79□□□□□ -0.52
CLCN2-215ENST00000636661 FUSP35637 526 aaKnown RBP eCLIP11.78□□□□□ -0.52
CLCN2-215ENST00000636661 IGLV4-60A0A075B6I1 120 aa11.77□□□□□ -0.52
CLCN2-215ENST00000636661 CITED1Q99966 193 aa11.77□□□□□ -0.53
CLCN2-215ENST00000636661 LINC00315P59091 139 aa11.77□□□□□ -0.53
CLCN2-215ENST00000636661 CDK2AP2O75956 126 aa11.77□□□□□ -0.53
CLCN2-215ENST00000636661 LYRM9A8MSI8 78 aa11.75□□□□□ -0.53
CLCN2-215ENST00000636661 AMELXQ99217 191 aa11.75□□□□□ -0.53
CLCN2-215ENST00000636661 CHD6Q8TD26 2715 aa11.75□□□□□ -0.53
CLCN2-215ENST00000636661 COX7BP24311 80 aa11.75□□□□□ -0.53
CLCN2-215ENST00000636661 PRR3P79522 188 aaKnown RBP11.75□□□□□ -0.53
CLCN2-215ENST00000636661 CCDC179H3BU77 68 aa11.74□□□□□ -0.53
CLCN2-215ENST00000636661 COL27A1Q8IZC6 1860 aaPredicted RBP11.74□□□□□ -0.53
CLCN2-215ENST00000636661 SMIM9A6NGZ8 99 aa11.74□□□□□ -0.53
CLCN2-215ENST00000636661 C20orf197Q8N268 126 aa11.74□□□□□ -0.53
CLCN2-215ENST00000636661 C9orf116Q5BN46 136 aaPredicted RBP11.74□□□□□ -0.53
CLCN2-215ENST00000636661 IGKV2-24A0A0C4DH68 120 aa11.73□□□□□ -0.53
CLCN2-215ENST00000636661 ITPR3Q14573 2671 aa11.73□□□□□ -0.53
CLCN2-215ENST00000636661 ENHOQ6UWT2 76 aa11.73□□□□□ -0.53
CLCN2-215ENST00000636661 Q6ZQY7 126 aa11.72□□□□□ -0.53
CLCN2-215ENST00000636661 LY6G6DO95868 133 aa11.71□□□□□ -0.53
CLCN2-215ENST00000636661 UPK3BQ9BT76 320 aa11.71□□□□□ -0.53
CLCN2-215ENST00000636661 BRI3O95415 125 aa11.71□□□□□ -0.54
CLCN2-215ENST00000636661 CD164L2Q6UWJ8 174 aa11.71□□□□□ -0.54
CLCN2-215ENST00000636661 C11orf45Q8TAV5 145 aa11.7□□□□□ -0.54
CLCN2-215ENST00000636661 CLUHP3Q96NS8 147 aa11.7□□□□□ -0.54
CLCN2-215ENST00000636661 DEFB131BA0A096LNP1 70 aa11.68□□□□□ -0.54
CLCN2-215ENST00000636661 HILS1P60008 231 aa11.68□□□□□ -0.54
CLCN2-215ENST00000636661 CFAP47Q6ZTR5 3102 aa11.68□□□□□ -0.54
CLCN2-215ENST00000636661 ADGRG4Q8IZF6 3080 aa11.68□□□□□ -0.54
CLCN2-215ENST00000636661 WFDC9Q8NEX5 89 aa11.68□□□□□ -0.54
CLCN2-215ENST00000636661 UNQ6190/PRO20217Q6UXQ8 127 aa11.67□□□□□ -0.54
CLCN2-215ENST00000636661 UQCRQO14949 82 aa11.67□□□□□ -0.54
CLCN2-215ENST00000636661 IGKV2-28A0A075B6P5 120 aa11.67□□□□□ -0.54
CLCN2-215ENST00000636661 A0A096LNI7 61 aa11.67□□□□□ -0.54
CLCN2-215ENST00000636661 IGKV2D-28P01615 120 aa11.67□□□□□ -0.54
CLCN2-215ENST00000636661 IGLV1-51P01701 117 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms