RNA–Protein interactions for RNA: ENST00000635293.1

TP53-228, Transcript of tumor protein p53, humanhuman

TSL 5

Gene TP53, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-228ENST00000635293 SPATA25Q9BR10 227 aa8.11□□□□□ -1.11
TP53-228ENST00000635293 H3BNG1 76 aa8.1□□□□□ -1.11
TP53-228ENST00000635293 MDFIQ99750 246 aa8.1□□□□□ -1.11
TP53-228ENST00000635293 K7EIL1 84 aa8.09□□□□□ -1.11
TP53-228ENST00000635293 HTN3P15516 51 aa8.09□□□□□ -1.11
TP53-228ENST00000635293 RNF151Q2KHN1 245 aa8.09□□□□□ -1.11
TP53-228ENST00000635293 A0A1B0GUV1 79 aa8.09□□□□□ -1.12
TP53-228ENST00000635293 IGHV3-30P01768 117 aa8.09□□□□□ -1.12
TP53-228ENST00000635293 IGHV3-30-5P0DP03 117 aa8.09□□□□□ -1.12
TP53-228ENST00000635293 TM2D3Q9BRN9 247 aa8.09□□□□□ -1.12
TP53-228ENST00000635293 IGHV1-58A0A0C4DH39 117 aa8.08□□□□□ -1.12
TP53-228ENST00000635293 F8W1H4 67 aa8.08□□□□□ -1.12
TP53-228ENST00000635293 LINC00242Q5T6M2 205 aa8.08□□□□□ -1.12
TP53-228ENST00000635293 CMYA5Q8N3K9 4069 aa8.08□□□□□ -1.12
TP53-228ENST00000635293 DNAH3Q8TD57 4116 aa8.07□□□□□ -1.12
TP53-228ENST00000635293 TRAV13-1A0A0B4J241 112 aa8.06□□□□□ -1.12
TP53-228ENST00000635293 A0A0J9YWU9 116 aa8.06□□□□□ -1.12
TP53-228ENST00000635293 IGHV3-30-3P0DP02 117 aa8.06□□□□□ -1.12
TP53-228ENST00000635293 PGPEP1Q9NXJ5 209 aa8.06□□□□□ -1.12
TP53-228ENST00000635293 IGLV4-60A0A075B6I1 120 aa8.06□□□□□ -1.12
TP53-228ENST00000635293 A0A096LPF7 62 aa8.06□□□□□ -1.12
TP53-228ENST00000635293 LELP1Q5T871 98 aa8.06□□□□□ -1.12
TP53-228ENST00000635293 VPS25Q9BRG1 176 aa8.06□□□□□ -1.12
TP53-228ENST00000635293 CDKN2A-AS1Q9UH64 79 aa8.06□□□□□ -1.12
TP53-228ENST00000635293 Q6ZTC4 211 aa8.05□□□□□ -1.12
TP53-228ENST00000635293 ANK2Q01484 3957 aa8.05□□□□□ -1.12
TP53-228ENST00000635293 NBEAL2Q6ZNJ1 2754 aa8.05□□□□□ -1.12
TP53-228ENST00000635293 IGHV3-64A0A075B6Q5 118 aa8.04□□□□□ -1.12
TP53-228ENST00000635293 IGLV5-39A0A0G2JS06 123 aa8.04□□□□□ -1.12
TP53-228ENST00000635293 H3BMG7 143 aa8.04□□□□□ -1.12
TP53-228ENST00000635293 APOMO95445 188 aa8.04□□□□□ -1.12
TP53-228ENST00000635293 PRB2P02812 416 aaPredicted RBP8.04□□□□□ -1.12
TP53-228ENST00000635293 SPINK8P0C7L1 97 aa8.04□□□□□ -1.12
TP53-228ENST00000635293 COX6A2Q02221 97 aa8.04□□□□□ -1.12
TP53-228ENST00000635293 C11orf45Q8TAV5 145 aa8.04□□□□□ -1.12
TP53-228ENST00000635293 TRAV8-3A0A0A6YYJ7 113 aa8.04□□□□□ -1.12
TP53-228ENST00000635293 CFC1BP0CG36 223 aa8.04□□□□□ -1.12
TP53-228ENST00000635293 CFC1P0CG37 223 aa8.04□□□□□ -1.12
TP53-228ENST00000635293 ZFAND6Q6FIF0 208 aa8.04□□□□□ -1.12
TP53-228ENST00000635293 TMEM238C9JI98 176 aa8.03□□□□□ -1.12
TP53-228ENST00000635293 TMEM262E9PQX1 116 aa8.03□□□□□ -1.12
TP53-228ENST00000635293 TSPAN13O95857 204 aa8.03□□□□□ -1.12
TP53-228ENST00000635293 PKD1L1Q8TDX9 2849 aa8.03□□□□□ -1.12
TP53-228ENST00000635293 A0A0J9YXY3 114 aa8.02□□□□□ -1.12
TP53-228ENST00000635293 SMIM1B2RUZ4 78 aa8.02□□□□□ -1.12
TP53-228ENST00000635293 RPL24P83731 157 aaKnown RBP8.02□□□□□ -1.12
TP53-228ENST00000635293 WFDC2Q14508 124 aa8.02□□□□□ -1.12
TP53-228ENST00000635293 DEFB121Q5J5C9 76 aa8.02□□□□□ -1.12
TP53-228ENST00000635293 PRO1854Q9UHT4 67 aa8.02□□□□□ -1.12
TP53-228ENST00000635293 NDUFA12Q9UI09 145 aa8.02□□□□□ -1.12
TP53-228ENST00000635293 PCP4P48539 62 aa8.02□□□□□ -1.13
TP53-228ENST00000635293 LYRM7Q5U5X0 104 aa8.02□□□□□ -1.13
TP53-228ENST00000635293 C10orf126Q8N4M7 172 aa8.02□□□□□ -1.13
TP53-228ENST00000635293 DEFB131BA0A096LNP1 70 aa8.01□□□□□ -1.13
TP53-228ENST00000635293 LINC00959A0A1B0GUT2 108 aa8.01□□□□□ -1.13
TP53-228ENST00000635293 NDUFA1O15239 70 aa8.01□□□□□ -1.13
TP53-228ENST00000635293 NANOS2P60321 138 aaKnown RBP8.01□□□□□ -1.13
TP53-228ENST00000635293 SS18Q15532 418 aa8.01□□□□□ -1.13
TP53-228ENST00000635293 MUSTN1Q8IVN3 82 aa8.01□□□□□ -1.13
TP53-228ENST00000635293 PRO0461Q9UI25 63 aa8.01□□□□□ -1.13
TP53-228ENST00000635293 LOC107984156A0A0G2JMH3 177 aa8□□□□□ -1.13
TP53-228ENST00000635293 A4D1N5 150 aa8□□□□□ -1.13
TP53-228ENST00000635293 ARL17AQ8IVW1 177 aa8□□□□□ -1.13
TP53-228ENST00000635293 TRAV10A0A0B4J240 114 aa8□□□□□ -1.13
TP53-228ENST00000635293 LYPD5Q6UWN5 251 aa8□□□□□ -1.13
TP53-228ENST00000635293 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.99□□□□□ -1.13
TP53-228ENST00000635293 IGHV3OR16-9A0A0B4J2B5 98 aa7.99□□□□□ -1.13
TP53-228ENST00000635293 A0A0B4J2C4 111 aa7.99□□□□□ -1.13
TP53-228ENST00000635293 IGKV3OR2-268A0A0C4DH90 116 aa7.99□□□□□ -1.13
TP53-228ENST00000635293 TIMM17BO60830 172 aa7.99□□□□□ -1.13
TP53-228ENST00000635293 LINC01561Q8N1V8 128 aa7.99□□□□□ -1.13
TP53-228ENST00000635293 MRAPQ8TCY5 172 aa7.99□□□□□ -1.13
TP53-228ENST00000635293 NOTCH1P46531 2555 aa7.99□□□□□ -1.13
TP53-228ENST00000635293 TRBV20-1A0A075B6N2 111 aa7.98□□□□□ -1.13
TP53-228ENST00000635293 A0A087WZ39 114 aa7.98□□□□□ -1.13
TP53-228ENST00000635293 PSMB2P49721 201 aa7.98□□□□□ -1.13
TP53-228ENST00000635293 LITAFQ99732 161 aa7.98□□□□□ -1.13
TP53-228ENST00000635293 ANGP03950 147 aaKnown RBP7.98□□□□□ -1.13
TP53-228ENST00000635293 SPANXDQ9BXN6 97 aa7.98□□□□□ -1.13
TP53-228ENST00000635293 SPANXCQ9NY87 97 aa7.98□□□□□ -1.13
TP53-228ENST00000635293 J3QR89 54 aa7.97□□□□□ -1.13
TP53-228ENST00000635293 IGHV3-33P01772 117 aa7.97□□□□□ -1.13
TP53-228ENST00000635293 HERV-K104P63124 156 aa7.97□□□□□ -1.13
TP53-228ENST00000635293 REG3AQ06141 175 aa7.97□□□□□ -1.13
TP53-228ENST00000635293 ETDBQ3ZM63 59 aa7.97□□□□□ -1.13
TP53-228ENST00000635293 LINC00269Q8N2A0 174 aa7.97□□□□□ -1.13
TP53-228ENST00000635293 C15orf53Q8NAA6 179 aa7.97□□□□□ -1.13
TP53-228ENST00000635293 ERG28Q9UKR5 140 aa7.97□□□□□ -1.13
TP53-228ENST00000635293 SCGB1C2P0DMR2 95 aa7.96□□□□□ -1.13
TP53-228ENST00000635293 SFTA2Q6UW10 78 aa7.96□□□□□ -1.13
TP53-228ENST00000635293 B9D2Q9BPU9 175 aa7.96□□□□□ -1.13
TP53-228ENST00000635293 EIF4EBP3O60516 100 aaPredicted RBP7.96□□□□□ -1.14
TP53-228ENST00000635293 TCL1BO95988 128 aa7.96□□□□□ -1.14
TP53-228ENST00000635293 PRSS2P07478 247 aa7.96□□□□□ -1.14
TP53-228ENST00000635293 COX7B2Q8TF08 81 aa7.96□□□□□ -1.14
TP53-228ENST00000635293 ZNF625Q96I27 306 aaPredicted RBP7.96□□□□□ -1.14
TP53-228ENST00000635293 Q9H8V8 135 aa7.96□□□□□ -1.14
TP53-228ENST00000635293 TENM3Q9P273 2699 aa7.95□□□□□ -1.14
TP53-228ENST00000635293 ADAMTSL4-AS1Q5T5F5 129 aa7.95□□□□□ -1.14
TP53-228ENST00000635293 CLPSL2Q6UWE3 100 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms