RNA–Protein interactions for RNA: ENST00000628364.2

NRXN1-228, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 2,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-228ENST00000628364 FHL2Q14192 279 aa19.06■□□□□ 0.64
NRXN1-228ENST00000628364 PRIMA1Q86XR5 153 aa19.06■□□□□ 0.64
NRXN1-228ENST00000628364 TMEM262E9PQX1 116 aa19.04■□□□□ 0.64
NRXN1-228ENST00000628364 NF1P21359 2839 aa19.04■□□□□ 0.64
NRXN1-228ENST00000628364 PPDPFQ9H3Y8 114 aa19.04■□□□□ 0.64
NRXN1-228ENST00000628364 MEIG1Q5JSS6 88 aa19.03■□□□□ 0.64
NRXN1-228ENST00000628364 TRBV6-8A0A0A6YYG3 113 aa19.02■□□□□ 0.63
NRXN1-228ENST00000628364 PF4P02776 101 aa19.02■□□□□ 0.63
NRXN1-228ENST00000628364 TENM4Q6N022 2769 aa19.01■□□□□ 0.63
NRXN1-228ENST00000628364 KIR2DL5BQ8NHK3 375 aa19.01■□□□□ 0.63
NRXN1-228ENST00000628364 LST1O00453 97 aa18.99■□□□□ 0.63
NRXN1-228ENST00000628364 GAGE6Q13070 117 aa18.99■□□□□ 0.63
NRXN1-228ENST00000628364 H3BT86 120 aa18.99■□□□□ 0.63
NRXN1-228ENST00000628364 LINC00482Q8N8I6 264 aa18.99■□□□□ 0.63
NRXN1-228ENST00000628364 NTN5Q8WTR8 489 aaPredicted RBP18.99■□□□□ 0.63
NRXN1-228ENST00000628364 A0A0U1RRA0 63 aa18.97■□□□□ 0.63
NRXN1-228ENST00000628364 C2orf82Q6UX34 121 aa18.96■□□□□ 0.63
NRXN1-228ENST00000628364 ANK3Q12955 4377 aaKnown RBP18.96■□□□□ 0.63
NRXN1-228ENST00000628364 CUBNO60494 3623 aa18.96■□□□□ 0.63
NRXN1-228ENST00000628364 KRTAP10-3P60369 221 aa18.96■□□□□ 0.63
NRXN1-228ENST00000628364 LINC00612Q8N6U2 182 aa18.96■□□□□ 0.63
NRXN1-228ENST00000628364 CHCHD5Q9BSY4 110 aa18.95■□□□□ 0.62
NRXN1-228ENST00000628364 SOSTDC1Q6X4U4 206 aa18.95■□□□□ 0.62
NRXN1-228ENST00000628364 CLEC2BQ92478 149 aa18.95■□□□□ 0.62
NRXN1-228ENST00000628364 COX7B2Q8TF08 81 aa18.94■□□□□ 0.62
NRXN1-228ENST00000628364 SETXQ7Z333 2677 aaKnown RBP18.94■□□□□ 0.62
NRXN1-228ENST00000628364 SMIM9A6NGZ8 99 aa18.93■□□□□ 0.62
NRXN1-228ENST00000628364 CRLF1O75462 422 aa18.93■□□□□ 0.62
NRXN1-228ENST00000628364 IGLV4-60A0A075B6I1 120 aa18.92■□□□□ 0.62
NRXN1-228ENST00000628364 DEFB130BP0DP73 79 aa18.92■□□□□ 0.62
NRXN1-228ENST00000628364 DEFB130AP0DP74 79 aa18.92■□□□□ 0.62
NRXN1-228ENST00000628364 XGP55808 180 aa18.92■□□□□ 0.62
NRXN1-228ENST00000628364 UBE2WQ96B02 151 aa18.92■□□□□ 0.62
NRXN1-228ENST00000628364 SMR3AQ99954 134 aa18.91■□□□□ 0.62
NRXN1-228ENST00000628364 ACANP16112 2415 aa18.91■□□□□ 0.62
NRXN1-228ENST00000628364 SHISA2Q6UWI4 295 aa18.9■□□□□ 0.62
NRXN1-228ENST00000628364 MT-ATP8P03928 68 aa18.9■□□□□ 0.62
NRXN1-228ENST00000628364 IGHV3OR16-9A0A0B4J2B5 98 aa18.89■□□□□ 0.61
NRXN1-228ENST00000628364 COX7A2LO14548 114 aa18.89■□□□□ 0.61
NRXN1-228ENST00000628364 TEX49A0A1B0GTD5 131 aa18.88■□□□□ 0.61
NRXN1-228ENST00000628364 IGKV3OR2-268A0A0C4DH90 116 aa18.88■□□□□ 0.61
NRXN1-228ENST00000628364 A0A087WZ39 114 aa18.86■□□□□ 0.61
NRXN1-228ENST00000628364 X6R8D5 127 aa18.86■□□□□ 0.61
NRXN1-228ENST00000628364 SETD2Q9BYW2 2564 aaPredicted RBP18.86■□□□□ 0.61
NRXN1-228ENST00000628364 JMJD1CQ15652 2540 aa18.86■□□□□ 0.61
NRXN1-228ENST00000628364 NOTCH3Q9UM47 2321 aa18.86■□□□□ 0.61
NRXN1-228ENST00000628364 LY6G6DO95868 133 aa18.85■□□□□ 0.61
NRXN1-228ENST00000628364 GYPEP15421 78 aa18.85■□□□□ 0.61
NRXN1-228ENST00000628364 TOMM7Q9P0U1 55 aa18.85■□□□□ 0.61
NRXN1-228ENST00000628364 C9orf66Q5T8R8 295 aa18.84■□□□□ 0.61
NRXN1-228ENST00000628364 MTORP42345 2549 aa18.83■□□□□ 0.61
NRXN1-228ENST00000628364 TRAV13-2A0A0B4J235 113 aa18.83■□□□□ 0.6
NRXN1-228ENST00000628364 TRAV8-4A0A0B4J246 113 aa18.83■□□□□ 0.6
NRXN1-228ENST00000628364 FAM222AQ5U5X8 452 aa18.83■□□□□ 0.6
NRXN1-228ENST00000628364 PRO0255Q9UI72 69 aa18.83■□□□□ 0.6
NRXN1-228ENST00000628364 A0A1B0GV72 72 aa18.82■□□□□ 0.6
NRXN1-228ENST00000628364 LINC00959A0A1B0GUT2 108 aa18.82■□□□□ 0.6
NRXN1-228ENST00000628364 A0A1B0GUV1 79 aa18.82■□□□□ 0.6
NRXN1-228ENST00000628364 MIR7-3HGQ8N6C7 128 aa18.81■□□□□ 0.6
NRXN1-228ENST00000628364 LYRM9A8MSI8 78 aa18.8■□□□□ 0.6
NRXN1-228ENST00000628364 IBA57-AS1B1ANH7 110 aa18.8■□□□□ 0.6
NRXN1-228ENST00000628364 DEFB121Q5J5C9 76 aa18.8■□□□□ 0.6
NRXN1-228ENST00000628364 NIPBLQ6KC79 2804 aaeCLIP18.8■□□□□ 0.6
NRXN1-228ENST00000628364 ITPR2Q14571 2701 aa18.78■□□□□ 0.6
NRXN1-228ENST00000628364 LINC00158P58513 81 aa18.78■□□□□ 0.6
NRXN1-228ENST00000628364 TRACP01848 142 aa18.77■□□□□ 0.6
NRXN1-228ENST00000628364 HIVEP2P31629 2446 aa18.77■□□□□ 0.6
NRXN1-228ENST00000628364 SS18Q15532 418 aa18.77■□□□□ 0.6
NRXN1-228ENST00000628364 C5orf38Q86SI9 138 aa18.77■□□□□ 0.6
NRXN1-228ENST00000628364 CRPP02741 224 aa18.76■□□□□ 0.59
NRXN1-228ENST00000628364 SND1-IT1Q9HBX3 110 aa18.76■□□□□ 0.59
NRXN1-228ENST00000628364 C2CD3Q4AC94 2353 aa18.76■□□□□ 0.59
NRXN1-228ENST00000628364 RPL28P46779 137 aaKnown RBP18.75■□□□□ 0.59
NRXN1-228ENST00000628364 CKS1BP61024 79 aa18.75■□□□□ 0.59
NRXN1-228ENST00000628364 UNC79Q9P2D8 2635 aa18.75■□□□□ 0.59
NRXN1-228ENST00000628364 PAX4O43316 350 aa18.73■□□□□ 0.59
NRXN1-228ENST00000628364 LINC01561Q8N1V8 128 aa18.73■□□□□ 0.59
NRXN1-228ENST00000628364 FAM240AA0A1B0GVK7 77 aa18.72■□□□□ 0.59
NRXN1-228ENST00000628364 SNCGO76070 127 aa18.72■□□□□ 0.59
NRXN1-228ENST00000628364 APOC4P55056 127 aa18.72■□□□□ 0.59
NRXN1-228ENST00000628364 C6orf226Q5I0X4 101 aa18.71■□□□□ 0.59
NRXN1-228ENST00000628364 CITED1Q99966 193 aa18.71■□□□□ 0.59
NRXN1-228ENST00000628364 IGKV2-28A0A075B6P5 120 aa18.7■□□□□ 0.58
NRXN1-228ENST00000628364 IGKV2D-28P01615 120 aa18.7■□□□□ 0.58
NRXN1-228ENST00000628364 CCL18P55774 89 aa18.69■□□□□ 0.58
NRXN1-228ENST00000628364 LINC00337Q8N6G1 96 aa18.69■□□□□ 0.58
NRXN1-228ENST00000628364 XCL1P47992 114 aa18.68■□□□□ 0.58
NRXN1-228ENST00000628364 MRPL23Q16540 153 aaKnown RBP18.68■□□□□ 0.58
NRXN1-228ENST00000628364 KMT2BQ9UMN6 2715 aaPredicted RBP18.68■□□□□ 0.58
NRXN1-228ENST00000628364 Q8IZM0 81 aa18.68■□□□□ 0.58
NRXN1-228ENST00000628364 INAFM1C9JVW0 142 aa18.66■□□□□ 0.58
NRXN1-228ENST00000628364 DEFB135Q30KP9 77 aa18.66■□□□□ 0.58
NRXN1-228ENST00000628364 SPATA3Q8NHX4 192 aa18.66■□□□□ 0.58
NRXN1-228ENST00000628364 TRAV26-1A0A087WT03 109 aa18.65■□□□□ 0.58
NRXN1-228ENST00000628364 PFN2P35080 140 aa18.65■□□□□ 0.58
NRXN1-228ENST00000628364 HELZ2Q9BYK8 2649 aaKnown RBP18.65■□□□□ 0.58
NRXN1-228ENST00000628364 A0A096LPF7 62 aa18.64■□□□□ 0.57
NRXN1-228ENST00000628364 BAALC-AS2P0C853 105 aa18.64■□□□□ 0.57
NRXN1-228ENST00000628364 GAGE2BQ13066 116 aa18.63■□□□□ 0.57
NRXN1-228ENST00000628364 GAGE2EQ4V326 116 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms