RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 TRAV23DV6A0A075B6W5 121 aa2.78□□□□□ -1.96
RNF38-210ENST00000611646 RBMY1FQ15415 496 aaKnown RBP2.78□□□□□ -1.96
RNF38-210ENST00000611646 Q6ZSN1 163 aa2.78□□□□□ -1.96
RNF38-210ENST00000611646 SMR3AQ99954 134 aa2.78□□□□□ -1.96
RNF38-210ENST00000611646 IGIPA6NJ69 53 aa2.78□□□□□ -1.96
RNF38-210ENST00000611646 COX6A2Q02221 97 aa2.78□□□□□ -1.96
RNF38-210ENST00000611646 SPAG11BQ08648 103 aa2.78□□□□□ -1.96
RNF38-210ENST00000611646 FAM222AQ5U5X8 452 aa2.78□□□□□ -1.96
RNF38-210ENST00000611646 WFDC9Q8NEX5 89 aa2.78□□□□□ -1.96
RNF38-210ENST00000611646 XAGE1AQ9HD64 81 aa2.78□□□□□ -1.96
RNF38-210ENST00000611646 UBE2D4Q9Y2X8 147 aa2.78□□□□□ -1.96
RNF38-210ENST00000611646 IGLV1-40P01703 118 aa2.78□□□□□ -1.96
RNF38-210ENST00000611646 ADAMTSL4-AS1Q5T5F5 129 aa2.78□□□□□ -1.96
RNF38-210ENST00000611646 RNF152Q8N8N0 203 aa2.78□□□□□ -1.96
RNF38-210ENST00000611646 CNFNQ9BYD5 112 aa2.78□□□□□ -1.96
RNF38-210ENST00000611646 CCDC179H3BU77 68 aa2.78□□□□□ -1.96
RNF38-210ENST00000611646 RPL32P62910 135 aaKnown RBP2.78□□□□□ -1.96
RNF38-210ENST00000611646 CLUHP3Q96NS8 147 aa2.78□□□□□ -1.96
RNF38-210ENST00000611646 SPATA25Q9BR10 227 aa2.78□□□□□ -1.96
RNF38-210ENST00000611646 ZMAT4Q9H898 229 aa2.78□□□□□ -1.96
RNF38-210ENST00000611646 ABCA12Q86UK0 2595 aa2.78□□□□□ -1.96
RNF38-210ENST00000611646 PIEZO1Q92508 2521 aa2.78□□□□□ -1.97
RNF38-210ENST00000611646 IGLV2-18A0A075B6J9 118 aa2.77□□□□□ -1.97
RNF38-210ENST00000611646 LINC00694P0DN24 101 aa2.77□□□□□ -1.97
RNF38-210ENST00000611646 UBE2BP63146 152 aa2.77□□□□□ -1.97
RNF38-210ENST00000611646 BBC3Q96PG8 261 aaPredicted RBP2.77□□□□□ -1.97
RNF38-210ENST00000611646 H3BT86 120 aa2.77□□□□□ -1.97
RNF38-210ENST00000611646 C9orf85Q96MD7 179 aa2.77□□□□□ -1.97
RNF38-210ENST00000611646 C1orf43Q9BWL3 253 aa2.77□□□□□ -1.97
RNF38-210ENST00000611646 JMJD1CQ15652 2540 aa2.77□□□□□ -1.97
RNF38-210ENST00000611646 TRBV10-1A0A0K0K1A3 114 aa2.77□□□□□ -1.97
RNF38-210ENST00000611646 SPART-AS1P0CW21 52 aa2.77□□□□□ -1.97
RNF38-210ENST00000611646 PRR3P79522 188 aaKnown RBP2.77□□□□□ -1.97
RNF38-210ENST00000611646 REG3AQ06141 175 aa2.77□□□□□ -1.97
RNF38-210ENST00000611646 TMEM89A2RUT3 159 aa2.77□□□□□ -1.97
RNF38-210ENST00000611646 INAFM1C9JVW0 142 aa2.77□□□□□ -1.97
RNF38-210ENST00000611646 H0YGX0 51 aa2.77□□□□□ -1.97
RNF38-210ENST00000611646 H7C423 109 aa2.77□□□□□ -1.97
RNF38-210ENST00000611646 CHCHD10Q8WYQ3 142 aaPredicted RBP2.77□□□□□ -1.97
RNF38-210ENST00000611646 PSMG3-AS1Q96PY0 264 aa2.77□□□□□ -1.97
RNF38-210ENST00000611646 Q9UF83 564 aa2.77□□□□□ -1.97
RNF38-210ENST00000611646 RBM3P98179 157 aaKnown RBP2.76□□□□□ -1.97
RNF38-210ENST00000611646 C9orf66Q5T8R8 295 aa2.76□□□□□ -1.97
RNF38-210ENST00000611646 ZFYVE26Q68DK2 2539 aa2.76□□□□□ -1.97
RNF38-210ENST00000611646 FN1P02751 2386 aaKnown RBP2.76□□□□□ -1.97
RNF38-210ENST00000611646 NDUFA1O15239 70 aa2.76□□□□□ -1.97
RNF38-210ENST00000611646 ACYP1P07311 99 aa2.76□□□□□ -1.97
RNF38-210ENST00000611646 C9orf116Q5BN46 136 aaPredicted RBP2.76□□□□□ -1.97
RNF38-210ENST00000611646 ODF3Q96PU9 254 aa2.76□□□□□ -1.97
RNF38-210ENST00000611646 PRO0255Q9UI72 69 aa2.76□□□□□ -1.97
RNF38-210ENST00000611646 TRBV6-8A0A0A6YYG3 113 aa2.76□□□□□ -1.97
RNF38-210ENST00000611646 UBE2D1P51668 147 aa2.76□□□□□ -1.97
RNF38-210ENST00000611646 ENHOQ6UWT2 76 aa2.76□□□□□ -1.97
RNF38-210ENST00000611646 SPANXCQ9NY87 97 aa2.76□□□□□ -1.97
RNF38-210ENST00000611646 TRBV6-5A0A0K0K1A5 114 aa2.76□□□□□ -1.97
RNF38-210ENST00000611646 TRBV30A0A0K0K1B3 111 aa2.76□□□□□ -1.97
RNF38-210ENST00000611646 PTPRBP23467 1997 aa2.75□□□□□ -1.97
RNF38-210ENST00000611646 A0A096LNI7 61 aa2.75□□□□□ -1.97
RNF38-210ENST00000611646 ZNF843Q8N446 348 aa2.75□□□□□ -1.97
RNF38-210ENST00000611646 SMIM11BQ8TCY0 68 aa2.75□□□□□ -1.97
RNF38-210ENST00000611646 IGKV2-24A0A0C4DH68 120 aa2.75□□□□□ -1.97
RNF38-210ENST00000611646 ETDCA0A1B0GVM5 59 aa2.75□□□□□ -1.97
RNF38-210ENST00000611646 ODF3L2Q3SX64 289 aa2.75□□□□□ -1.97
RNF38-210ENST00000611646 C6orf99Q4VX62 202 aa2.75□□□□□ -1.97
RNF38-210ENST00000611646 LINC00242Q5T6M2 205 aa2.75□□□□□ -1.97
RNF38-210ENST00000611646 LINC01006Q8NI28 216 aa2.75□□□□□ -1.97
RNF38-210ENST00000611646 CHCHD7Q9BUK0 85 aa2.75□□□□□ -1.97
RNF38-210ENST00000611646 IGLV4-60A0A075B6I1 120 aa2.75□□□□□ -1.97
RNF38-210ENST00000611646 CXCL5P42830 114 aa2.75□□□□□ -1.97
RNF38-210ENST00000611646 AGRNO00468 2067 aa2.75□□□□□ -1.97
RNF38-210ENST00000611646 IGKV2-28A0A075B6P5 120 aa2.74□□□□□ -1.97
RNF38-210ENST00000611646 LST1O00453 97 aa2.74□□□□□ -1.97
RNF38-210ENST00000611646 IGKV2D-28P01615 120 aa2.74□□□□□ -1.97
RNF38-210ENST00000611646 TIRAPP58753 221 aa2.74□□□□□ -1.97
RNF38-210ENST00000611646 MRPS36P82909 103 aaKnown RBP2.74□□□□□ -1.97
RNF38-210ENST00000611646 UPK3BQ9BT76 320 aa2.74□□□□□ -1.97
RNF38-210ENST00000611646 PYGO1Q9Y3Y4 419 aa2.74□□□□□ -1.97
RNF38-210ENST00000611646 A0A087WVE0 104 aa2.74□□□□□ -1.97
RNF38-210ENST00000611646 ATOX1O00244 68 aa2.74□□□□□ -1.97
RNF38-210ENST00000611646 LINC00643Q86TS7 51 aa2.74□□□□□ -1.97
RNF38-210ENST00000611646 C20orf197Q8N268 126 aa2.74□□□□□ -1.97
RNF38-210ENST00000611646 DIRC1Q969H9 104 aa2.74□□□□□ -1.97
RNF38-210ENST00000611646 LRBAP50851 2863 aa2.74□□□□□ -1.97
RNF38-210ENST00000611646 MTORP42345 2549 aa2.74□□□□□ -1.97
RNF38-210ENST00000611646 NDUFS5O43920 106 aa2.74□□□□□ -1.97
RNF38-210ENST00000611646 CDK2AP2O75956 126 aa2.74□□□□□ -1.97
RNF38-210ENST00000611646 NREPQ16612 68 aa2.74□□□□□ -1.97
RNF38-210ENST00000611646 SPANXDQ9BXN6 97 aa2.74□□□□□ -1.97
RNF38-210ENST00000611646 A0A087WYN8 130 aa2.74□□□□□ -1.97
RNF38-210ENST00000611646 A8MTW9 85 aa2.74□□□□□ -1.97
RNF38-210ENST00000611646 TMEM256-PLSCR3K7ERE1 68 aa2.74□□□□□ -1.97
RNF38-210ENST00000611646 CDC42SE2Q9NRR3 84 aa2.74□□□□□ -1.97
RNF38-210ENST00000611646 ZNF462Q96JM2 2506 aa2.74□□□□□ -1.97
RNF38-210ENST00000611646 MAP1AP78559 2803 aaPredicted RBP2.74□□□□□ -1.97
RNF38-210ENST00000611646 LINC00959A0A1B0GUT2 108 aa2.73□□□□□ -1.97
RNF38-210ENST00000611646 C3orf84H3BNL1 204 aa2.73□□□□□ -1.97
RNF38-210ENST00000611646 C1orf158Q8N1D5 194 aa2.73□□□□□ -1.97
RNF38-210ENST00000611646 UTP20O75691 2785 aaKnown RBP2.73□□□□□ -1.97
RNF38-210ENST00000611646 SMIM1B2RUZ4 78 aa2.73□□□□□ -1.97
RNF38-210ENST00000611646 CCL18P55774 89 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms