RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 NMUP48645 174 aa7.93□□□□□ -1.14
ZNF548-211ENST00000600927 TMEM170BQ5T4T1 132 aa7.93□□□□□ -1.14
ZNF548-211ENST00000600927 PLEKHB2Q96CS7 222 aa7.93□□□□□ -1.14
ZNF548-211ENST00000600927 LEPROTO15243 131 aa7.92□□□□□ -1.14
ZNF548-211ENST00000600927 GEMIN7Q9H840 131 aaKnown RBP7.92□□□□□ -1.14
ZNF548-211ENST00000600927 HECTD4Q9Y4D8 3996 aa7.92□□□□□ -1.14
ZNF548-211ENST00000600927 IGKV2D-26A0A0A0MRZ7 120 aa7.91□□□□□ -1.14
ZNF548-211ENST00000600927 HTN3P15516 51 aa7.91□□□□□ -1.14
ZNF548-211ENST00000600927 CTAG1AP78358 180 aa7.91□□□□□ -1.14
ZNF548-211ENST00000600927 GAGE6Q13070 117 aa7.91□□□□□ -1.14
ZNF548-211ENST00000600927 C15orf53Q8NAA6 179 aa7.91□□□□□ -1.14
ZNF548-211ENST00000600927 FAT2Q9NYQ8 4349 aa7.9□□□□□ -1.14
ZNF548-211ENST00000600927 MYMXA0A1B0GTQ4 84 aa7.9□□□□□ -1.14
ZNF548-211ENST00000600927 TAL2Q16559 108 aa7.9□□□□□ -1.14
ZNF548-211ENST00000600927 LINC00242Q5T6M2 205 aa7.9□□□□□ -1.14
ZNF548-211ENST00000600927 LYPD5Q6UWN5 251 aa7.9□□□□□ -1.14
ZNF548-211ENST00000600927 PCP2Q8IVA1 136 aa7.9□□□□□ -1.14
ZNF548-211ENST00000600927 LINC01561Q8N1V8 128 aa7.9□□□□□ -1.14
ZNF548-211ENST00000600927 TRAV8-6A0A0B4J262 113 aa7.89□□□□□ -1.15
ZNF548-211ENST00000600927 IGHV1-58A0A0C4DH39 117 aa7.89□□□□□ -1.15
ZNF548-211ENST00000600927 TMEM262E9PQX1 116 aa7.89□□□□□ -1.15
ZNF548-211ENST00000600927 J3QQQ9 107 aa7.89□□□□□ -1.15
ZNF548-211ENST00000600927 RBX1P62877 108 aa7.89□□□□□ -1.15
ZNF548-211ENST00000600927 C2orf91Q6ZV80 131 aa7.89□□□□□ -1.15
ZNF548-211ENST00000600927 DNAH17Q9UFH2 4485 aa7.88□□□□□ -1.15
ZNF548-211ENST00000600927 IGLV4-60A0A075B6I1 120 aa7.88□□□□□ -1.15
ZNF548-211ENST00000600927 LINC00469Q8N7U9 141 aa7.88□□□□□ -1.15
ZNF548-211ENST00000600927 TRAV13-1A0A0B4J241 112 aa7.87□□□□□ -1.15
ZNF548-211ENST00000600927 LGALS3P17931 250 aaKnown RBP7.87□□□□□ -1.15
ZNF548-211ENST00000600927 HSD52Q0P140 79 aa7.87□□□□□ -1.15
ZNF548-211ENST00000600927 SS18Q15532 418 aa7.87□□□□□ -1.15
ZNF548-211ENST00000600927 RNASE13Q5GAN3 156 aaKnown RBP7.87□□□□□ -1.15
ZNF548-211ENST00000600927 SNHG12Q9BXW3 62 aa7.87□□□□□ -1.15
ZNF548-211ENST00000600927 IGLV5-39A0A0G2JS06 123 aa7.86□□□□□ -1.15
ZNF548-211ENST00000600927 LINC00959A0A1B0GUT2 108 aa7.86□□□□□ -1.15
ZNF548-211ENST00000600927 IGHV3-30-3P0DP02 117 aa7.86□□□□□ -1.15
ZNF548-211ENST00000600927 MPV17L2Q567V2 206 aa7.86□□□□□ -1.15
ZNF548-211ENST00000600927 MAPKAPK5-AS1Q8N8E1 139 aa7.86□□□□□ -1.15
ZNF548-211ENST00000600927 CDKN2A-AS1Q9UH64 79 aa7.86□□□□□ -1.15
ZNF548-211ENST00000600927 IGHV3OR16-9A0A0B4J2B5 98 aa7.85□□□□□ -1.15
ZNF548-211ENST00000600927 ZNF815PA8K554 130 aa7.85□□□□□ -1.15
ZNF548-211ENST00000600927 COX6A2Q02221 97 aa7.85□□□□□ -1.15
ZNF548-211ENST00000600927 A0A087WZ39 114 aa7.84□□□□□ -1.15
ZNF548-211ENST00000600927 COL5A1-AS1Q5SY13 56 aa7.84□□□□□ -1.15
ZNF548-211ENST00000600927 SFTA2Q6UW10 78 aa7.84□□□□□ -1.15
ZNF548-211ENST00000600927 SPANXB1Q9NS25 103 aaPredicted RBP7.84□□□□□ -1.15
ZNF548-211ENST00000600927 PRR34Q9NV39 138 aa7.84□□□□□ -1.15
ZNF548-211ENST00000600927 TRAV8-4A0A0B4J246 113 aa7.83□□□□□ -1.16
ZNF548-211ENST00000600927 BVES-AS1Q5T3Y7 98 aa7.83□□□□□ -1.16
ZNF548-211ENST00000600927 Q6ZVH6 145 aa7.83□□□□□ -1.16
ZNF548-211ENST00000600927 TM2D2Q9BX73 214 aa7.83□□□□□ -1.16
ZNF548-211ENST00000600927 TTTY13Q9BZ97 58 aa7.83□□□□□ -1.16
ZNF548-211ENST00000600927 SMIM1B2RUZ4 78 aa7.82□□□□□ -1.16
ZNF548-211ENST00000600927 TIMM17BO60830 172 aa7.82□□□□□ -1.16
ZNF548-211ENST00000600927 ANGP03950 147 aaKnown RBP7.82□□□□□ -1.16
ZNF548-211ENST00000600927 REG3AQ06141 175 aa7.82□□□□□ -1.16
ZNF548-211ENST00000600927 ESRGQ1W209 222 aa7.82□□□□□ -1.16
ZNF548-211ENST00000600927 CD164L2Q6UWJ8 174 aa7.82□□□□□ -1.16
ZNF548-211ENST00000600927 SCGB1D4Q6XE38 83 aa7.82□□□□□ -1.16
ZNF548-211ENST00000600927 ORAOV1Q8WV07 137 aa7.82□□□□□ -1.16
ZNF548-211ENST00000600927 TP73-AS1Q9UF72 201 aa7.82□□□□□ -1.16
ZNF548-211ENST00000600927 SPINK8P0C7L1 97 aa7.81□□□□□ -1.16
ZNF548-211ENST00000600927 HINT1P49773 126 aaPredicted RBP7.81□□□□□ -1.16
ZNF548-211ENST00000600927 TSPEAR-AS2P59090 65 aa7.81□□□□□ -1.16
ZNF548-211ENST00000600927 HERV-K104P63124 156 aa7.81□□□□□ -1.16
ZNF548-211ENST00000600927 LINC01556Q5JQF7 62 aa7.81□□□□□ -1.16
ZNF548-211ENST00000600927 Q6ZR54 194 aa7.81□□□□□ -1.16
ZNF548-211ENST00000600927 LINC00269Q8N2A0 174 aa7.81□□□□□ -1.16
ZNF548-211ENST00000600927 NDUFA12Q9UI09 145 aa7.81□□□□□ -1.16
ZNF548-211ENST00000600927 TRAV8-3A0A0A6YYJ7 113 aa7.8□□□□□ -1.16
ZNF548-211ENST00000600927 A0A0J9YXY3 114 aa7.8□□□□□ -1.16
ZNF548-211ENST00000600927 A6NDN8 102 aa7.8□□□□□ -1.16
ZNF548-211ENST00000600927 K7EP13 123 aa7.8□□□□□ -1.16
ZNF548-211ENST00000600927 EREGO14944 169 aa7.8□□□□□ -1.16
ZNF548-211ENST00000600927 NDUFA1O15239 70 aa7.8□□□□□ -1.16
ZNF548-211ENST00000600927 CEND1Q8N111 149 aa7.8□□□□□ -1.16
ZNF548-211ENST00000600927 PKD1P98161 4303 aa7.79□□□□□ -1.16
ZNF548-211ENST00000600927 TMEM238C9JI98 176 aa7.79□□□□□ -1.16
ZNF548-211ENST00000600927 CCL18P55774 89 aa7.79□□□□□ -1.16
ZNF548-211ENST00000600927 MIAQ16674 131 aa7.79□□□□□ -1.16
ZNF548-211ENST00000600927 UBE2DNLQ8IWF7 75 aa7.79□□□□□ -1.16
ZNF548-211ENST00000600927 HIST1H4GQ99525 98 aa7.79□□□□□ -1.16
ZNF548-211ENST00000600927 UPK3BQ9BT76 320 aa7.79□□□□□ -1.16
ZNF548-211ENST00000600927 PPDPFQ9H3Y8 114 aa7.79□□□□□ -1.16
ZNF548-211ENST00000600927 LINC00588Q9Y4M8 146 aa7.79□□□□□ -1.16
ZNF548-211ENST00000600927 TMEM238LA0A1B0GVL6 79 aa7.78□□□□□ -1.16
ZNF548-211ENST00000600927 A6NJY4 79 aa7.78□□□□□ -1.16
ZNF548-211ENST00000600927 DNAH10OSP0CZ25 163 aa7.78□□□□□ -1.16
ZNF548-211ENST00000600927 SRSF9Q13242 221 aaKnown RBP eCLIP7.78□□□□□ -1.168e-6■■□□□ 11.7
ZNF548-211ENST00000600927 CIRBPQ14011 172 aaKnown RBP7.78□□□□□ -1.16
ZNF548-211ENST00000600927 PKHD1P08F94 4074 aa7.78□□□□□ -1.16
ZNF548-211ENST00000600927 DNAH11Q96DT5 4516 aa7.77□□□□□ -1.17
ZNF548-211ENST00000600927 IGHV3-64A0A075B6Q5 118 aa7.77□□□□□ -1.17
ZNF548-211ENST00000600927 IGKV3OR2-268A0A0C4DH90 116 aa7.77□□□□□ -1.17
ZNF548-211ENST00000600927 GCSHP23434 173 aa7.77□□□□□ -1.17
ZNF548-211ENST00000600927 PTTG1IPP53801 180 aa7.77□□□□□ -1.17
ZNF548-211ENST00000600927 BATFQ16520 125 aa7.77□□□□□ -1.17
ZNF548-211ENST00000600927 C10orf126Q8N4M7 172 aa7.77□□□□□ -1.17
ZNF548-211ENST00000600927 COX7B2Q8TF08 81 aa7.77□□□□□ -1.17
ZNF548-211ENST00000600927 COPS9Q8WXC6 57 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms