RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 IGHV3-64A0A075B6Q5 118 aa10.37□□□□□ -0.75
VRK3-207ENST00000594092 IGKV3OR2-268A0A0C4DH90 116 aa10.37□□□□□ -0.75
VRK3-207ENST00000594092 J3QQQ9 107 aa10.37□□□□□ -0.75
VRK3-207ENST00000594092 HINT1P49773 126 aaPredicted RBP10.37□□□□□ -0.75
VRK3-207ENST00000594092 COX6A2Q02221 97 aa10.37□□□□□ -0.75
VRK3-207ENST00000594092 CDKN2A-AS1Q9UH64 79 aa10.37□□□□□ -0.75
VRK3-207ENST00000594092 IGHV1-58A0A0C4DH39 117 aa10.36□□□□□ -0.75
VRK3-207ENST00000594092 WFDC10BQ8IUB3 73 aa10.36□□□□□ -0.75
VRK3-207ENST00000594092 SPINK8P0C7L1 97 aa10.35□□□□□ -0.75
VRK3-207ENST00000594092 TSPEAR-AS2P59090 65 aa10.35□□□□□ -0.75
VRK3-207ENST00000594092 IGHV3-30-3P0DP02 117 aa10.35□□□□□ -0.75
VRK3-207ENST00000594092 TRAV8-3A0A0A6YYJ7 113 aa10.34□□□□□ -0.75
VRK3-207ENST00000594092 ANGP03950 147 aaKnown RBP10.34□□□□□ -0.75
VRK3-207ENST00000594092 HSD52Q0P140 79 aa10.34□□□□□ -0.75
VRK3-207ENST00000594092 SCGB1D4Q6XE38 83 aa10.33□□□□□ -0.76
VRK3-207ENST00000594092 LINC00269Q8N2A0 174 aa10.33□□□□□ -0.76
VRK3-207ENST00000594092 LINC00588Q9Y4M8 146 aa10.33□□□□□ -0.76
VRK3-207ENST00000594092 LINC00959A0A1B0GUT2 108 aa10.33□□□□□ -0.76
VRK3-207ENST00000594092 IGHV3-30P01768 117 aa10.33□□□□□ -0.76
VRK3-207ENST00000594092 IGHV3-33P01772 117 aa10.33□□□□□ -0.76
VRK3-207ENST00000594092 IGHV3-30-5P0DP03 117 aa10.33□□□□□ -0.76
VRK3-207ENST00000594092 BVES-AS1Q5T3Y7 98 aa10.33□□□□□ -0.76
VRK3-207ENST00000594092 CLPSL2Q6UWE3 100 aa10.33□□□□□ -0.76
VRK3-207ENST00000594092 CSMD3Q7Z407 3707 aa10.33□□□□□ -0.76
VRK3-207ENST00000594092 NUPR2A6NF83 97 aa10.32□□□□□ -0.76
VRK3-207ENST00000594092 CCL18P55774 89 aa10.32□□□□□ -0.76
VRK3-207ENST00000594092 SS18Q15532 418 aa10.32□□□□□ -0.76
VRK3-207ENST00000594092 APLNQ9ULZ1 77 aa10.32□□□□□ -0.76
VRK3-207ENST00000594092 CCL25O15444 150 aa10.3□□□□□ -0.76
VRK3-207ENST00000594092 REG3AQ06141 175 aa10.3□□□□□ -0.76
VRK3-207ENST00000594092 COL5A1-AS1Q5SY13 56 aa10.3□□□□□ -0.76
VRK3-207ENST00000594092 KLK12Q9UKR0 248 aa10.3□□□□□ -0.76
VRK3-207ENST00000594092 SMIM1B2RUZ4 78 aa10.3□□□□□ -0.76
VRK3-207ENST00000594092 LINC01556Q5JQF7 62 aa10.3□□□□□ -0.76
VRK3-207ENST00000594092 KLK5Q9Y337 293 aaPredicted RBP10.3□□□□□ -0.76
VRK3-207ENST00000594092 IGLV5-39A0A0G2JS06 123 aa10.29□□□□□ -0.76
VRK3-207ENST00000594092 TAL2Q16559 108 aa10.29□□□□□ -0.76
VRK3-207ENST00000594092 PRR34Q9NV39 138 aa10.29□□□□□ -0.76
VRK3-207ENST00000594092 HIST1H4GQ99525 98 aa10.28□□□□□ -0.76
VRK3-207ENST00000594092 IGHV3OR16-9A0A0B4J2B5 98 aa10.28□□□□□ -0.76
VRK3-207ENST00000594092 DNAH10OSP0CZ25 163 aa10.28□□□□□ -0.76
VRK3-207ENST00000594092 ZFAND6Q6FIF0 208 aa10.28□□□□□ -0.76
VRK3-207ENST00000594092 ORAOV1Q8WV07 137 aa10.28□□□□□ -0.76
VRK3-207ENST00000594092 NDUFA12Q9UI09 145 aa10.28□□□□□ -0.76
VRK3-207ENST00000594092 GCSHP23434 173 aa10.27□□□□□ -0.77
VRK3-207ENST00000594092 XCL1P47992 114 aa10.27□□□□□ -0.77
VRK3-207ENST00000594092 PLECQ15149 4684 aaKnown RBP10.27□□□□□ -0.77
VRK3-207ENST00000594092 ENHOQ6UWT2 76 aa10.27□□□□□ -0.77
VRK3-207ENST00000594092 UPK3BQ9BT76 320 aa10.27□□□□□ -0.77
VRK3-207ENST00000594092 STARD9Q9P2P6 4700 aa10.27□□□□□ -0.77
VRK3-207ENST00000594092 CEND1Q8N111 149 aa10.26□□□□□ -0.77
VRK3-207ENST00000594092 IGLV10-54A0A075B6I4 117 aa10.26□□□□□ -0.77
VRK3-207ENST00000594092 A0A087WZ39 114 aa10.26□□□□□ -0.77
VRK3-207ENST00000594092 CHCHD10Q8WYQ3 142 aaPredicted RBP10.26□□□□□ -0.77
VRK3-207ENST00000594092 TGP01266 2768 aa10.25□□□□□ -0.77
VRK3-207ENST00000594092 SRSF9Q13242 221 aaKnown RBP eCLIP10.25□□□□□ -0.77
VRK3-207ENST00000594092 C10orf126Q8N4M7 172 aa10.25□□□□□ -0.77
VRK3-207ENST00000594092 UBE2WQ96B02 151 aa10.25□□□□□ -0.77
VRK3-207ENST00000594092 SPANXB1Q9NS25 103 aaPredicted RBP10.25□□□□□ -0.77
VRK3-207ENST00000594092 A0A0J9YXY3 114 aa10.24□□□□□ -0.77
VRK3-207ENST00000594092 A6NDN8 102 aa10.24□□□□□ -0.77
VRK3-207ENST00000594092 NDUFA1O15239 70 aa10.24□□□□□ -0.77
VRK3-207ENST00000594092 CRPP02741 224 aa10.24□□□□□ -0.77
VRK3-207ENST00000594092 C5orf38Q86SI9 138 aa10.24□□□□□ -0.77
VRK3-207ENST00000594092 TM2D2Q9BX73 214 aa10.24□□□□□ -0.77
VRK3-207ENST00000594092 PTTG1IPP53801 180 aa10.23□□□□□ -0.77
VRK3-207ENST00000594092 CD164L2Q6UWJ8 174 aa10.23□□□□□ -0.77
VRK3-207ENST00000594092 LYSTQ99698 3801 aa10.23□□□□□ -0.77
VRK3-207ENST00000594092 TMEM238C9JI98 176 aa10.23□□□□□ -0.77
VRK3-207ENST00000594092 LINC01561Q8N1V8 128 aa10.23□□□□□ -0.77
VRK3-207ENST00000594092 FXYD2P54710 66 aa10.22□□□□□ -0.77
VRK3-207ENST00000594092 COX7B2Q8TF08 81 aa10.22□□□□□ -0.77
VRK3-207ENST00000594092 Q9H8V8 135 aa10.22□□□□□ -0.77
VRK3-207ENST00000594092 TRAV8-4A0A0B4J246 113 aa10.21□□□□□ -0.77
VRK3-207ENST00000594092 MIAQ16674 131 aa10.21□□□□□ -0.77
VRK3-207ENST00000594092 UBE2DNLQ8IWF7 75 aa10.21□□□□□ -0.77
VRK3-207ENST00000594092 MUC7Q8TAX7 377 aa10.21□□□□□ -0.77
VRK3-207ENST00000594092 TENM2Q9NT68 2774 aa10.21□□□□□ -0.77
VRK3-207ENST00000594092 FOXI1Q12951 378 aa10.21□□□□□ -0.78
VRK3-207ENST00000594092 TOMM7Q9P0U1 55 aa10.21□□□□□ -0.78
VRK3-207ENST00000594092 GAGE12HA6NDE8 117 aa10.2□□□□□ -0.78
VRK3-207ENST00000594092 COX7A2LO14548 114 aa10.2□□□□□ -0.78
VRK3-207ENST00000594092 HERV-K104P63124 156 aa10.19□□□□□ -0.78
VRK3-207ENST00000594092 ZNF625Q96I27 306 aaPredicted RBP10.19□□□□□ -0.78
VRK3-207ENST00000594092 WWC2-AS2Q96NR7 200 aa10.19□□□□□ -0.78
VRK3-207ENST00000594092 TMEM238LA0A1B0GVL6 79 aa10.19□□□□□ -0.78
VRK3-207ENST00000594092 A6NJY4 79 aa10.19□□□□□ -0.78
VRK3-207ENST00000594092 IBA57-AS1B1ANH7 110 aa10.19□□□□□ -0.78
VRK3-207ENST00000594092 TIMM17BO60830 172 aa10.19□□□□□ -0.78
VRK3-207ENST00000594092 CIRBPQ14011 172 aaKnown RBP10.19□□□□□ -0.78
VRK3-207ENST00000594092 K7EP13 123 aa10.18□□□□□ -0.78
VRK3-207ENST00000594092 MALP21145 153 aa10.18□□□□□ -0.78
VRK3-207ENST00000594092 PRSS2P07478 247 aa10.17□□□□□ -0.78
VRK3-207ENST00000594092 KRTAP26-1Q6PEX3 210 aa10.17□□□□□ -0.78
VRK3-207ENST00000594092 SFTA2Q6UW10 78 aa10.17□□□□□ -0.78
VRK3-207ENST00000594092 LITAFQ99732 161 aa10.17□□□□□ -0.78
VRK3-207ENST00000594092 NHP2Q9NX24 153 aaKnown RBP10.17□□□□□ -0.78
VRK3-207ENST00000594092 DNAH1Q9P2D7 4330 aa10.17□□□□□ -0.78
VRK3-207ENST00000594092 TAX1BP3O14907 124 aa10.17□□□□□ -0.78
VRK3-207ENST00000594092 SMIM13P0DJ93 91 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms