RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 FAM213BQ8TBF2 198 aa3.83□□□□□ -1.8
VMP1-215ENST00000592619 PRO0461Q9UI25 63 aa3.83□□□□□ -1.8
VMP1-215ENST00000592619 R4GMQ9 66 aa3.83□□□□□ -1.8
VMP1-215ENST00000592619 ARFGEF3Q5TH69 2177 aa3.83□□□□□ -1.8
VMP1-215ENST00000592619 PLCE1Q9P212 2302 aa3.83□□□□□ -1.8
VMP1-215ENST00000592619 ANK3Q12955 4377 aaKnown RBP3.83□□□□□ -1.8
VMP1-215ENST00000592619 IGHV1-3A0A0C4DH29 117 aa3.82□□□□□ -1.8
VMP1-215ENST00000592619 SLC25A20O43772 301 aa3.82□□□□□ -1.8
VMP1-215ENST00000592619 SH2D1AO60880 128 aa3.82□□□□□ -1.8
VMP1-215ENST00000592619 LY6HO94772 140 aa3.82□□□□□ -1.8
VMP1-215ENST00000592619 CCKP06307 115 aa3.82□□□□□ -1.8
VMP1-215ENST00000592619 ZNF345Q14585 488 aa3.82□□□□□ -1.8
VMP1-215ENST00000592619 INSL4Q14641 139 aa3.82□□□□□ -1.8
VMP1-215ENST00000592619 LINC00483Q53H64 154 aa3.82□□□□□ -1.8
VMP1-215ENST00000592619 ADM2Q7Z4H4 148 aa3.82□□□□□ -1.8
VMP1-215ENST00000592619 DYNAPQ8N1N2 210 aa3.82□□□□□ -1.8
VMP1-215ENST00000592619 LINC01600Q96MT4 127 aa3.82□□□□□ -1.8
VMP1-215ENST00000592619 TRBV24-1A0A075B6N3 115 aa3.81□□□□□ -1.8
VMP1-215ENST00000592619 A0A096LNT2 108 aa3.81□□□□□ -1.8
VMP1-215ENST00000592619 PIGBOS1A0A0B4J2F0 54 aa3.81□□□□□ -1.8
VMP1-215ENST00000592619 IGHV1-24A0A0C4DH33 117 aa3.81□□□□□ -1.8
VMP1-215ENST00000592619 KANTRA0A1W2PQU2 76 aa3.81□□□□□ -1.8
VMP1-215ENST00000592619 A8MWP4 228 aa3.81□□□□□ -1.8
VMP1-215ENST00000592619 LECT2O14960 151 aa3.81□□□□□ -1.8
VMP1-215ENST00000592619 NUPR1O60356 82 aa3.81□□□□□ -1.8
VMP1-215ENST00000592619 SIX6O95475 246 aa3.81□□□□□ -1.8
VMP1-215ENST00000592619 MSMBP08118 114 aa3.81□□□□□ -1.8
VMP1-215ENST00000592619 Q1T7F1 81 aa3.81□□□□□ -1.8
VMP1-215ENST00000592619 SERP2Q8N6R1 65 aa3.81□□□□□ -1.8
VMP1-215ENST00000592619 CIRBP-AS1Q8TBR5 109 aa3.81□□□□□ -1.8
VMP1-215ENST00000592619 AQP3Q92482 292 aa3.81□□□□□ -1.8
VMP1-215ENST00000592619 TRGV9Q99603 122 aa3.81□□□□□ -1.8
VMP1-215ENST00000592619 TTTY10Q9BZA0 68 aa3.81□□□□□ -1.8
VMP1-215ENST00000592619 BPESC1Q9GZL8 116 aa3.81□□□□□ -1.8
VMP1-215ENST00000592619 NHP2Q9NX24 153 aaKnown RBP3.81□□□□□ -1.8
VMP1-215ENST00000592619 ITPR3Q14573 2671 aa3.8□□□□□ -1.8
VMP1-215ENST00000592619 CR1P17927 2039 aa3.8□□□□□ -1.8
VMP1-215ENST00000592619 MYO9AB2RTY4 2548 aa3.8□□□□□ -1.8
VMP1-215ENST00000592619 IGKV2D-24A0A075B6R9 120 aa3.8□□□□□ -1.8
VMP1-215ENST00000592619 MUC21A0A140T8X8 626 aa3.8□□□□□ -1.8
VMP1-215ENST00000592619 H3BUT2 72 aa3.8□□□□□ -1.8
VMP1-215ENST00000592619 CD24P25063 80 aa3.8□□□□□ -1.8
VMP1-215ENST00000592619 Q8NDZ9 215 aa3.8□□□□□ -1.8
VMP1-215ENST00000592619 SVEP1Q4LDE5 3571 aa3.8□□□□□ -1.8
VMP1-215ENST00000592619 NOTCH2Q04721 2471 aa3.8□□□□□ -1.8
VMP1-215ENST00000592619 SPG11Q96JI7 2443 aa3.8□□□□□ -1.8
VMP1-215ENST00000592619 MAP1AP78559 2803 aaPredicted RBP3.8□□□□□ -1.8
VMP1-215ENST00000592619 ROS1P08922 2347 aa3.79□□□□□ -1.8
VMP1-215ENST00000592619 A6NED7 52 aa3.79□□□□□ -1.8
VMP1-215ENST00000592619 LYNX1G3V0Z9 82 aa3.79□□□□□ -1.8
VMP1-215ENST00000592619 CREBL2O60519 120 aaPredicted RBP3.79□□□□□ -1.8
VMP1-215ENST00000592619 IGKV1D-33P01593 117 aa3.79□□□□□ -1.8
VMP1-215ENST00000592619 IGKV1-33P01594 117 aa3.79□□□□□ -1.8
VMP1-215ENST00000592619 LYNX1P0DP58 116 aa3.79□□□□□ -1.8
VMP1-215ENST00000592619 SUPT4H1P63272 117 aaKnown RBP3.79□□□□□ -1.8
VMP1-215ENST00000592619 ELOBQ15370 118 aa3.79□□□□□ -1.8
VMP1-215ENST00000592619 SLC50A1Q9BRV3 221 aa3.79□□□□□ -1.8
VMP1-215ENST00000592619 MRPL35Q9NZE8 188 aaKnown RBP3.79□□□□□ -1.8
VMP1-215ENST00000592619 CCDC168Q8NDH2 2452 aa3.79□□□□□ -1.8
VMP1-215ENST00000592619 HIVEP1P15822 2718 aa3.79□□□□□ -1.8
VMP1-215ENST00000592619 AKAP6Q13023 2319 aa3.78□□□□□ -1.8
VMP1-215ENST00000592619 FLNAP21333 2647 aaKnown RBP3.78□□□□□ -1.8
VMP1-215ENST00000592619 USF3Q68DE3 2245 aa3.78□□□□□ -1.8
VMP1-215ENST00000592619 MDFIC2A0A1B0GVS7 189 aa3.78□□□□□ -1.8
VMP1-215ENST00000592619 C19orf71A6NCJ1 209 aa3.78□□□□□ -1.8
VMP1-215ENST00000592619 B4DSR2 109 aa3.78□□□□□ -1.8
VMP1-215ENST00000592619 H3BMM0 161 aa3.78□□□□□ -1.8
VMP1-215ENST00000592619 GNRH2O43555 120 aa3.78□□□□□ -1.8
VMP1-215ENST00000592619 LHBP01229 141 aa3.78□□□□□ -1.8
VMP1-215ENST00000592619 SDIM1Q6ZPB5 146 aa3.78□□□□□ -1.8
VMP1-215ENST00000592619 Q6ZQT7 251 aa3.78□□□□□ -1.8
VMP1-215ENST00000592619 UBE2WQ96B02 151 aa3.78□□□□□ -1.8
VMP1-215ENST00000592619 RNF5Q99942 180 aa3.78□□□□□ -1.8
VMP1-215ENST00000592619 RETNLBQ9BQ08 111 aa3.78□□□□□ -1.8
VMP1-215ENST00000592619 ARID1AO14497 2285 aa3.78□□□□□ -1.8
VMP1-215ENST00000592619 CUBNO60494 3623 aa3.77□□□□□ -1.81
VMP1-215ENST00000592619 IGLV4-60A0A075B6I1 120 aa3.77□□□□□ -1.81
VMP1-215ENST00000592619 IGHV3-73A0A0B4J1V6 119 aa3.77□□□□□ -1.81
VMP1-215ENST00000592619 C17orf112F2Z3M2 114 aa3.77□□□□□ -1.81
VMP1-215ENST00000592619 NDUFC1O43677 76 aa3.77□□□□□ -1.81
VMP1-215ENST00000592619 IGLV1-51P01701 117 aa3.77□□□□□ -1.81
VMP1-215ENST00000592619 TRGV3P03979 118 aa3.77□□□□□ -1.81
VMP1-215ENST00000592619 SPANXN1Q5VSR9 72 aa3.77□□□□□ -1.81
VMP1-215ENST00000592619 XAF1Q6GPH4 301 aa3.77□□□□□ -1.81
VMP1-215ENST00000592619 Q8IYB0 196 aa3.77□□□□□ -1.81
VMP1-215ENST00000592619 OR8B3Q8NGG8 313 aa3.77□□□□□ -1.81
VMP1-215ENST00000592619 OR8B2Q96RD0 313 aa3.77□□□□□ -1.81
VMP1-215ENST00000592619 SMR3AQ99954 134 aa3.77□□□□□ -1.81
VMP1-215ENST00000592619 KRTAP4-3Q9BYR4 195 aa3.77□□□□□ -1.81
VMP1-215ENST00000592619 CST11Q9H112 138 aa3.77□□□□□ -1.81
VMP1-215ENST00000592619 KAAG1Q9UBP8 84 aa3.77□□□□□ -1.81
VMP1-215ENST00000592619 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
VMP1-215ENST00000592619 ZFHX3Q15911 3703 aa3.77□□□□□ -1.81
VMP1-215ENST00000592619 RTTNQ86VV8 2226 aa3.76□□□□□ -1.81
VMP1-215ENST00000592619 CREBBPQ92793 2442 aa3.76□□□□□ -1.81
VMP1-215ENST00000592619 ZANQ9Y493 2812 aa3.76□□□□□ -1.81
VMP1-215ENST00000592619 NAP1L6A6NFF2 107 aa3.76□□□□□ -1.81
VMP1-215ENST00000592619 A6NIN4 97 aa3.76□□□□□ -1.81
VMP1-215ENST00000592619 SFTA3P0C7M3 94 aa3.76□□□□□ -1.81
VMP1-215ENST00000592619 XCL1P47992 114 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms