RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 DEFB114Q30KQ6 69 aa13.82□□□□□ -0.2
MBD3-207ENST00000590550 UBE2D4Q9Y2X8 147 aa13.82□□□□□ -0.2
MBD3-207ENST00000590550 PYGO1Q9Y3Y4 419 aa13.82□□□□□ -0.2
MBD3-207ENST00000590550 C4orf3Q8WVX3 66 aa13.81□□□□□ -0.2
MBD3-207ENST00000590550 DEFB113Q30KQ7 82 aa13.81□□□□□ -0.2
MBD3-207ENST00000590550 A8MTW9 85 aa13.8□□□□□ -0.2
MBD3-207ENST00000590550 IGHV1-58A0A0C4DH39 117 aa13.8□□□□□ -0.2
MBD3-207ENST00000590550 TRACP01848 142 aa13.8□□□□□ -0.2
MBD3-207ENST00000590550 CRYGAP11844 174 aa13.8□□□□□ -0.2
MBD3-207ENST00000590550 DSCR8Q96T75 97 aa13.8□□□□□ -0.2
MBD3-207ENST00000590550 CITED2Q99967 270 aaPredicted RBP13.79□□□□□ -0.2
MBD3-207ENST00000590550 SDIM1Q6ZPB5 146 aa13.79□□□□□ -0.2
MBD3-207ENST00000590550 IGHV3-53P01767 116 aa13.78□□□□□ -0.2
MBD3-207ENST00000590550 ATP5G1P05496 136 aa13.78□□□□□ -0.2
MBD3-207ENST00000590550 ODF3L2Q3SX64 289 aa13.78□□□□□ -0.2
MBD3-207ENST00000590550 C5orf38Q86SI9 138 aa13.78□□□□□ -0.2
MBD3-207ENST00000590550 Q8N2B8 174 aa13.78□□□□□ -0.2
MBD3-207ENST00000590550 INSP01308 110 aa13.78□□□□□ -0.2
MBD3-207ENST00000590550 TIRAPP58753 221 aa13.78□□□□□ -0.2
MBD3-207ENST00000590550 C4orf26Q17RF5 130 aa13.78□□□□□ -0.2
MBD3-207ENST00000590550 BAALC-AS2P0C853 105 aa13.77□□□□□ -0.2
MBD3-207ENST00000590550 ZNF625Q96I27 306 aaPredicted RBP13.77□□□□□ -0.2
MBD3-207ENST00000590550 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.77□□□□□ -0.21
MBD3-207ENST00000590550 VSIG2Q96IQ7 327 aa13.77□□□□□ -0.21
MBD3-207ENST00000590550 CDKN2A-AS1Q9UH64 79 aa13.77□□□□□ -0.21
MBD3-207ENST00000590550 TRGV1A0A0A0MS02 117 aa13.76□□□□□ -0.21
MBD3-207ENST00000590550 OXTP01178 125 aa13.76□□□□□ -0.21
MBD3-207ENST00000590550 HRCT1Q6UXD1 115 aa13.76□□□□□ -0.21
MBD3-207ENST00000590550 RPS28P62857 69 aaKnown RBP13.75□□□□□ -0.21
MBD3-207ENST00000590550 DPH3Q96FX2 82 aa13.75□□□□□ -0.21
MBD3-207ENST00000590550 ATOX1O00244 68 aa13.75□□□□□ -0.21
MBD3-207ENST00000590550 COX7A2LO14548 114 aa13.75□□□□□ -0.21
MBD3-207ENST00000590550 ZNF843Q8N446 348 aa13.75□□□□□ -0.21
MBD3-207ENST00000590550 IGKV3D-7A0A0C4DH55 119 aa13.74□□□□□ -0.21
MBD3-207ENST00000590550 CXCL5P42830 114 aa13.74□□□□□ -0.21
MBD3-207ENST00000590550 TINCRA0A1B0GVN0 87 aa13.74□□□□□ -0.21
MBD3-207ENST00000590550 C1orf158Q8N1D5 194 aa13.74□□□□□ -0.21
MBD3-207ENST00000590550 WIPF1O43516 503 aa13.73□□□□□ -0.21
MBD3-207ENST00000590550 COX6A2Q02221 97 aa13.73□□□□□ -0.21
MBD3-207ENST00000590550 HIST2H2BCQ6DN03 193 aa13.73□□□□□ -0.21
MBD3-207ENST00000590550 DGAT2L7PQ6IED9 249 aa13.73□□□□□ -0.21
MBD3-207ENST00000590550 KRTAP1-3Q8IUG1 177 aa13.73□□□□□ -0.21
MBD3-207ENST00000590550 STHQ8IWL8 128 aa13.73□□□□□ -0.21
MBD3-207ENST00000590550 Q9HAA7 133 aa13.73□□□□□ -0.21
MBD3-207ENST00000590550 WFDC11Q8NEX6 87 aa13.72□□□□□ -0.21
MBD3-207ENST00000590550 A0A087WVE0 104 aa13.72□□□□□ -0.21
MBD3-207ENST00000590550 BEAN1Q3B7T3 259 aa13.72□□□□□ -0.21
MBD3-207ENST00000590550 Q6ZTI0 123 aa13.71□□□□□ -0.21
MBD3-207ENST00000590550 F5H768 121 aa13.71□□□□□ -0.21
MBD3-207ENST00000590550 WFDC10AQ9H1F0 79 aa13.71□□□□□ -0.21
MBD3-207ENST00000590550 DNAJC9-AS1A6NH13 148 aa13.7□□□□□ -0.22
MBD3-207ENST00000590550 FAM218AQ96MZ4 157 aa13.7□□□□□ -0.22
MBD3-207ENST00000590550 FN1P02751 2386 aaKnown RBP13.7□□□□□ -0.22
MBD3-207ENST00000590550 ESM1Q9NQ30 184 aa13.7□□□□□ -0.22
MBD3-207ENST00000590550 C22orf24Q9Y442 160 aa13.7□□□□□ -0.22
MBD3-207ENST00000590550 HIST1H4AP62805 103 aaKnown RBP13.69□□□□□ -0.22
MBD3-207ENST00000590550 RPL18AQ02543 176 aaKnown RBP13.69□□□□□ -0.22
MBD3-207ENST00000590550 LINC00308Q8TCZ7 52 aa13.69□□□□□ -0.22
MBD3-207ENST00000590550 TENM4Q6N022 2769 aa13.69□□□□□ -0.22
MBD3-207ENST00000590550 PIK3CD-AS1Q5SR53 167 aa13.68□□□□□ -0.22
MBD3-207ENST00000590550 CCL24O00175 119 aa13.67□□□□□ -0.22
MBD3-207ENST00000590550 ITPR2Q14571 2701 aa13.67□□□□□ -0.22
MBD3-207ENST00000590550 TMEM258P61165 79 aa13.67□□□□□ -0.22
MBD3-207ENST00000590550 PLA2G2AP14555 144 aa13.66□□□□□ -0.22
MBD3-207ENST00000590550 NTM-AS1Q6ZSK4 140 aa13.66□□□□□ -0.22
MBD3-207ENST00000590550 CIRBPQ14011 172 aaKnown RBP13.66□□□□□ -0.22
MBD3-207ENST00000590550 NOP10Q9NPE3 64 aaKnown RBP13.66□□□□□ -0.22
MBD3-207ENST00000590550 LINC00242Q5T6M2 205 aa13.65□□□□□ -0.22
MBD3-207ENST00000590550 Q9H8V8 135 aa13.65□□□□□ -0.22
MBD3-207ENST00000590550 INAFM2P0DMQ5 153 aa13.65□□□□□ -0.22
MBD3-207ENST00000590550 DNAL4O96015 105 aa13.64□□□□□ -0.23
MBD3-207ENST00000590550 SOSTDC1Q6X4U4 206 aa13.64□□□□□ -0.23
MBD3-207ENST00000590550 SERP2Q8N6R1 65 aa13.64□□□□□ -0.23
MBD3-207ENST00000590550 C14orf132Q9NPU4 83 aa13.64□□□□□ -0.23
MBD3-207ENST00000590550 C9orf129Q5T035 196 aaKnown RBP13.63□□□□□ -0.23
MBD3-207ENST00000590550 RPL35AP18077 110 aaKnown RBP13.63□□□□□ -0.23
MBD3-207ENST00000590550 Q5XG85 94 aa13.63□□□□□ -0.23
MBD3-207ENST00000590550 LOC100131303A0A0U1RQF7 123 aa13.62□□□□□ -0.23
MBD3-207ENST00000590550 TIMM17BO60830 172 aa13.62□□□□□ -0.23
MBD3-207ENST00000590550 UPK3BQ9BT76 320 aa13.62□□□□□ -0.23
MBD3-207ENST00000590550 K7EQD1 137 aa13.61□□□□□ -0.23
MBD3-207ENST00000590550 MALP21145 153 aa13.61□□□□□ -0.23
MBD3-207ENST00000590550 PRIMA1Q86XR5 153 aa13.61□□□□□ -0.23
MBD3-207ENST00000590550 NBEAL2Q6ZNJ1 2754 aa13.61□□□□□ -0.23
MBD3-207ENST00000590550 NDUFA1O15239 70 aa13.61□□□□□ -0.23
MBD3-207ENST00000590550 RPL36AP83881 106 aaKnown RBP13.61□□□□□ -0.23
MBD3-207ENST00000590550 IL17DQ8TAD2 202 aa13.61□□□□□ -0.23
MBD3-207ENST00000590550 RPL36ALQ969Q0 106 aaKnown RBP13.61□□□□□ -0.23
MBD3-207ENST00000590550 GCN1Q92616 2671 aaKnown RBP13.6□□□□□ -0.23
MBD3-207ENST00000590550 IGLV5-45A0A087WSX0 123 aa13.6□□□□□ -0.23
MBD3-207ENST00000590550 GIG44P09565 113 aaPredicted RBP13.6□□□□□ -0.23
MBD3-207ENST00000590550 USP17L23D6RBM5 183 aa13.59□□□□□ -0.23
MBD3-207ENST00000590550 LINC00846Q9NV44 126 aa13.59□□□□□ -0.23
MBD3-207ENST00000590550 IGKV3OR2-268A0A0C4DH90 116 aa13.58□□□□□ -0.24
MBD3-207ENST00000590550 SMIM1B2RUZ4 78 aa13.58□□□□□ -0.24
MBD3-207ENST00000590550 LINC01561Q8N1V8 128 aa13.58□□□□□ -0.24
MBD3-207ENST00000590550 TRGV2A0A075B6R0 118 aa13.57□□□□□ -0.24
MBD3-207ENST00000590550 IGLV5-39A0A0G2JS06 123 aa13.56□□□□□ -0.24
MBD3-207ENST00000590550 FAM222AQ5U5X8 452 aa13.56□□□□□ -0.24
MBD3-207ENST00000590550 LINC01006Q8NI28 216 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms