RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 LYRM9A8MSI8 78 aa7.03□□□□□ -1.28
VPS25-202ENST00000589219 TIMM17BO60830 172 aa7.03□□□□□ -1.28
VPS25-202ENST00000589219 FHL2Q14192 279 aa7.03□□□□□ -1.28
VPS25-202ENST00000589219 SPANXDQ9BXN6 97 aa7.03□□□□□ -1.28
VPS25-202ENST00000589219 PGPEP1Q9NXJ5 209 aa7.03□□□□□ -1.28
VPS25-202ENST00000589219 SPANXCQ9NY87 97 aa7.03□□□□□ -1.28
VPS25-202ENST00000589219 X6R8D5 127 aa7.03□□□□□ -1.28
VPS25-202ENST00000589219 IGLV5-39A0A0G2JS06 123 aa7.02□□□□□ -1.29
VPS25-202ENST00000589219 NDUFA1O15239 70 aa7.02□□□□□ -1.29
VPS25-202ENST00000589219 SPINK8P0C7L1 97 aa7.02□□□□□ -1.29
VPS25-202ENST00000589219 B9D2Q9BPU9 175 aa7.02□□□□□ -1.29
VPS25-202ENST00000589219 CDC42SE2Q9NRR3 84 aa7.02□□□□□ -1.29
VPS25-202ENST00000589219 DNAH3Q8TD57 4116 aa7.02□□□□□ -1.29
VPS25-202ENST00000589219 TRAV8-3A0A0A6YYJ7 113 aa7.01□□□□□ -1.29
VPS25-202ENST00000589219 TSPAN13O95857 204 aa7.01□□□□□ -1.29
VPS25-202ENST00000589219 LINC00242Q5T6M2 205 aa7.01□□□□□ -1.29
VPS25-202ENST00000589219 CDKN2A-AS1Q9UH64 79 aa7.01□□□□□ -1.29
VPS25-202ENST00000589219 TRBV6-8A0A0A6YYG3 113 aa7□□□□□ -1.29
VPS25-202ENST00000589219 LOC100131303A0A0U1RQF7 123 aa7□□□□□ -1.29
VPS25-202ENST00000589219 K7ERU9 68 aa7□□□□□ -1.29
VPS25-202ENST00000589219 APOMO95445 188 aa7□□□□□ -1.29
VPS25-202ENST00000589219 NHLRC4P0CG21 123 aaPredicted RBP7□□□□□ -1.29
VPS25-202ENST00000589219 MIAQ16674 131 aa7□□□□□ -1.29
VPS25-202ENST00000589219 OCIAD2Q56VL3 154 aa7□□□□□ -1.29
VPS25-202ENST00000589219 WWC2-AS2Q96NR7 200 aa7□□□□□ -1.29
VPS25-202ENST00000589219 LITAFQ99732 161 aa7□□□□□ -1.29
VPS25-202ENST00000589219 A4D1N5 150 aa6.99□□□□□ -1.29
VPS25-202ENST00000589219 CFC1BP0CG36 223 aa6.99□□□□□ -1.29
VPS25-202ENST00000589219 CFC1P0CG37 223 aa6.99□□□□□ -1.29
VPS25-202ENST00000589219 IFITM1P13164 125 aa6.99□□□□□ -1.29
VPS25-202ENST00000589219 COPS9Q8WXC6 57 aa6.99□□□□□ -1.29
VPS25-202ENST00000589219 RNF183Q96D59 192 aa6.99□□□□□ -1.29
VPS25-202ENST00000589219 PRO1854Q9UHT4 67 aa6.99□□□□□ -1.29
VPS25-202ENST00000589219 PRO0255Q9UI72 69 aa6.99□□□□□ -1.29
VPS25-202ENST00000589219 TRAV13-1A0A0B4J241 112 aa6.98□□□□□ -1.29
VPS25-202ENST00000589219 SMIM1B2RUZ4 78 aa6.98□□□□□ -1.29
VPS25-202ENST00000589219 F8W1H4 67 aa6.98□□□□□ -1.29
VPS25-202ENST00000589219 DEFB130BP0DP73 79 aa6.98□□□□□ -1.29
VPS25-202ENST00000589219 DEFB130AP0DP74 79 aa6.98□□□□□ -1.29
VPS25-202ENST00000589219 MIFP14174 115 aa6.98□□□□□ -1.29
VPS25-202ENST00000589219 MUSTN1Q8IVN3 82 aa6.98□□□□□ -1.29
VPS25-202ENST00000589219 TRBV20-1A0A075B6N2 111 aa6.97□□□□□ -1.29
VPS25-202ENST00000589219 TEX48A0A1B0GUV7 120 aa6.97□□□□□ -1.29
VPS25-202ENST00000589219 GYPEP15421 78 aa6.97□□□□□ -1.29
VPS25-202ENST00000589219 HERV-K104P63124 156 aa6.97□□□□□ -1.29
VPS25-202ENST00000589219 COX6A2Q02221 97 aa6.97□□□□□ -1.29
VPS25-202ENST00000589219 GAGE6Q13070 117 aa6.97□□□□□ -1.29
VPS25-202ENST00000589219 CIRBPQ14011 172 aaKnown RBP6.97□□□□□ -1.29
VPS25-202ENST00000589219 DEFB135Q30KP9 77 aa6.97□□□□□ -1.29
VPS25-202ENST00000589219 FAM222AQ5U5X8 452 aa6.97□□□□□ -1.29
VPS25-202ENST00000589219 ATP6V0E2Q8NHE4 81 aa6.97□□□□□ -1.29
VPS25-202ENST00000589219 CHCHD5Q9BSY4 110 aa6.97□□□□□ -1.29
VPS25-202ENST00000589219 PPDPFQ9H3Y8 114 aa6.97□□□□□ -1.29
VPS25-202ENST00000589219 CBY1Q9Y3M2 126 aa6.97□□□□□ -1.29
VPS25-202ENST00000589219 IGHV4-28A0A0C4DH34 117 aa6.96□□□□□ -1.3
VPS25-202ENST00000589219 F5H768 121 aa6.96□□□□□ -1.3
VPS25-202ENST00000589219 ERG28Q9UKR5 140 aa6.96□□□□□ -1.3
VPS25-202ENST00000589219 TENM3Q9P273 2699 aa6.96□□□□□ -1.3
VPS25-202ENST00000589219 NBEAL2Q6ZNJ1 2754 aa6.96□□□□□ -1.3
VPS25-202ENST00000589219 TRAV26-1A0A087WT03 109 aa6.95□□□□□ -1.3
VPS25-202ENST00000589219 LOC107984156A0A0G2JMH3 177 aa6.95□□□□□ -1.3
VPS25-202ENST00000589219 IGHV3-33P01772 117 aa6.95□□□□□ -1.3
VPS25-202ENST00000589219 DAD1P61803 113 aa6.95□□□□□ -1.3
VPS25-202ENST00000589219 RBX1P62877 108 aa6.95□□□□□ -1.3
VPS25-202ENST00000589219 SFTA2Q6UW10 78 aa6.95□□□□□ -1.3
VPS25-202ENST00000589219 ARL17AQ8IVW1 177 aa6.95□□□□□ -1.3
VPS25-202ENST00000589219 LINC00528Q8N1L1 170 aa6.95□□□□□ -1.3
VPS25-202ENST00000589219 Q9H8V8 135 aa6.95□□□□□ -1.3
VPS25-202ENST00000589219 A0A1B0GUV1 79 aa6.94□□□□□ -1.3
VPS25-202ENST00000589219 A8MZ25 164 aa6.94□□□□□ -1.3
VPS25-202ENST00000589219 H3BMG7 143 aa6.94□□□□□ -1.3
VPS25-202ENST00000589219 PAX4O43316 350 aa6.94□□□□□ -1.3
VPS25-202ENST00000589219 Q8NAQ8 132 aa6.94□□□□□ -1.3
VPS25-202ENST00000589219 ZNF625Q96I27 306 aaPredicted RBP6.94□□□□□ -1.3
VPS25-202ENST00000589219 PRO0461Q9UI25 63 aa6.94□□□□□ -1.3
VPS25-202ENST00000589219 ATP5G1P05496 136 aa6.93□□□□□ -1.3
VPS25-202ENST00000589219 IGHV4-30-4P0DP06 118 aa6.93□□□□□ -1.3
VPS25-202ENST00000589219 Q1RN00 199 aa6.93□□□□□ -1.3
VPS25-202ENST00000589219 SH2D6Q7Z4S9 175 aa6.93□□□□□ -1.3
VPS25-202ENST00000589219 LINC01561Q8N1V8 128 aa6.93□□□□□ -1.3
VPS25-202ENST00000589219 IGLV4-60A0A075B6I1 120 aa6.92□□□□□ -1.3
VPS25-202ENST00000589219 J3QR89 54 aa6.92□□□□□ -1.3
VPS25-202ENST00000589219 EIF4EBP3O60516 100 aaPredicted RBP6.92□□□□□ -1.3
VPS25-202ENST00000589219 PRSS2P07478 247 aa6.92□□□□□ -1.3
VPS25-202ENST00000589219 SPART-AS1P0CW21 52 aa6.92□□□□□ -1.3
VPS25-202ENST00000589219 PSMB2P49721 201 aa6.92□□□□□ -1.3
VPS25-202ENST00000589219 MEIG1Q5JSS6 88 aa6.92□□□□□ -1.3
VPS25-202ENST00000589219 ADAMTSL4-AS1Q5T5F5 129 aa6.92□□□□□ -1.3
VPS25-202ENST00000589219 COX7B2Q8TF08 81 aa6.92□□□□□ -1.3
VPS25-202ENST00000589219 KMT2CQ8NEZ4 4911 aaKnown RBP6.92□□□□□ -1.3
VPS25-202ENST00000589219 A0A087WZ39 114 aa6.91□□□□□ -1.3
VPS25-202ENST00000589219 TRBV30A0A0K0K1B3 111 aa6.91□□□□□ -1.3
VPS25-202ENST00000589219 C3orf84H3BNL1 204 aa6.91□□□□□ -1.3
VPS25-202ENST00000589219 SCGB1C2P0DMR2 95 aa6.91□□□□□ -1.3
VPS25-202ENST00000589219 SS18Q15532 418 aa6.91□□□□□ -1.3
VPS25-202ENST00000589219 RNF151Q2KHN1 245 aa6.91□□□□□ -1.3
VPS25-202ENST00000589219 IGHV3OR16-9A0A0B4J2B5 98 aa6.9□□□□□ -1.3
VPS25-202ENST00000589219 LINC00959A0A1B0GUT2 108 aa6.9□□□□□ -1.3
VPS25-202ENST00000589219 M0QXV9 152 aa6.9□□□□□ -1.3
VPS25-202ENST00000589219 TCL1BO95988 128 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms