RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 AKAP9Q99996 3911 aa6.24□□□□□ -1.41
PPP4R1-213ENST00000579609 CEMP1Q6PRD7 247 aaPredicted RBP6.24□□□□□ -1.41
PPP4R1-213ENST00000579609 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.24□□□□□ -1.41
PPP4R1-213ENST00000579609 LITAFQ99732 161 aa6.24□□□□□ -1.41
PPP4R1-213ENST00000579609 CDKN2A-AS1Q9UH64 79 aa6.24□□□□□ -1.41
PPP4R1-213ENST00000579609 K7ERJ3 54 aa6.23□□□□□ -1.41
PPP4R1-213ENST00000579609 OCIAD2Q56VL3 154 aa6.23□□□□□ -1.41
PPP4R1-213ENST00000579609 CBY1Q9Y3M2 126 aa6.23□□□□□ -1.41
PPP4R1-213ENST00000579609 NSD1Q96L73 2696 aaPredicted RBP6.22□□□□□ -1.41
PPP4R1-213ENST00000579609 SMIM1B2RUZ4 78 aa6.22□□□□□ -1.41
PPP4R1-213ENST00000579609 TSPAN13O95857 204 aa6.22□□□□□ -1.41
PPP4R1-213ENST00000579609 CFC1BP0CG36 223 aa6.22□□□□□ -1.41
PPP4R1-213ENST00000579609 CFC1P0CG37 223 aa6.22□□□□□ -1.41
PPP4R1-213ENST00000579609 ATP6V0E2Q8NHE4 81 aa6.22□□□□□ -1.41
PPP4R1-213ENST00000579609 DEFB104AQ8WTQ1 72 aa6.22□□□□□ -1.41
PPP4R1-213ENST00000579609 LINC01600Q96MT4 127 aa6.22□□□□□ -1.41
PPP4R1-213ENST00000579609 TRAV8-3A0A0A6YYJ7 113 aa6.21□□□□□ -1.42
PPP4R1-213ENST00000579609 TRBV30A0A0K0K1B3 111 aa6.21□□□□□ -1.42
PPP4R1-213ENST00000579609 A4D1N5 150 aa6.21□□□□□ -1.42
PPP4R1-213ENST00000579609 F5H768 121 aa6.21□□□□□ -1.42
PPP4R1-213ENST00000579609 J3QR89 54 aa6.21□□□□□ -1.42
PPP4R1-213ENST00000579609 ATP5G1P05496 136 aa6.21□□□□□ -1.42
PPP4R1-213ENST00000579609 SPINK8P0C7L1 97 aa6.21□□□□□ -1.42
PPP4R1-213ENST00000579609 MUSTN1Q8IVN3 82 aa6.21□□□□□ -1.42
PPP4R1-213ENST00000579609 H3BNG1 76 aa6.2□□□□□ -1.42
PPP4R1-213ENST00000579609 IGHV3-33P01772 117 aa6.2□□□□□ -1.42
PPP4R1-213ENST00000579609 SPART-AS1P0CW21 52 aa6.2□□□□□ -1.42
PPP4R1-213ENST00000579609 FAM222AQ5U5X8 452 aa6.2□□□□□ -1.42
PPP4R1-213ENST00000579609 Q8NAQ8 132 aa6.2□□□□□ -1.42
PPP4R1-213ENST00000579609 ZNF625Q96I27 306 aaPredicted RBP6.2□□□□□ -1.42
PPP4R1-213ENST00000579609 ERG28Q9UKR5 140 aa6.2□□□□□ -1.42
PPP4R1-213ENST00000579609 A0A087WZ39 114 aa6.19□□□□□ -1.42
PPP4R1-213ENST00000579609 IGHV3OR16-9A0A0B4J2B5 98 aa6.19□□□□□ -1.42
PPP4R1-213ENST00000579609 PAX4O43316 350 aa6.19□□□□□ -1.42
PPP4R1-213ENST00000579609 APOMO95445 188 aa6.19□□□□□ -1.42
PPP4R1-213ENST00000579609 DEFB130BP0DP73 79 aa6.19□□□□□ -1.42
PPP4R1-213ENST00000579609 DEFB130AP0DP74 79 aa6.19□□□□□ -1.42
PPP4R1-213ENST00000579609 GYPEP15421 78 aa6.19□□□□□ -1.42
PPP4R1-213ENST00000579609 DAD1P61803 113 aa6.19□□□□□ -1.42
PPP4R1-213ENST00000579609 EGFEM1PQ0D2K5 195 aa6.19□□□□□ -1.42
PPP4R1-213ENST00000579609 RNASE13Q5GAN3 156 aaKnown RBP6.19□□□□□ -1.42
PPP4R1-213ENST00000579609 MUC7Q8TAX7 377 aa6.19□□□□□ -1.42
PPP4R1-213ENST00000579609 CHCHD5Q9BSY4 110 aa6.19□□□□□ -1.42
PPP4R1-213ENST00000579609 IGHV3-64A0A075B6Q5 118 aa6.18□□□□□ -1.42
PPP4R1-213ENST00000579609 TRAV13-1A0A0B4J241 112 aa6.18□□□□□ -1.42
PPP4R1-213ENST00000579609 IGHV4-28A0A0C4DH34 117 aa6.18□□□□□ -1.42
PPP4R1-213ENST00000579609 H3BMG7 143 aa6.18□□□□□ -1.42
PPP4R1-213ENST00000579609 COX6CP09669 75 aa6.18□□□□□ -1.42
PPP4R1-213ENST00000579609 RBX1P62877 108 aa6.18□□□□□ -1.42
PPP4R1-213ENST00000579609 COX6A2Q02221 97 aa6.18□□□□□ -1.42
PPP4R1-213ENST00000579609 MRPL23Q16540 153 aaKnown RBP6.18□□□□□ -1.42
PPP4R1-213ENST00000579609 Q9H8V8 135 aa6.18□□□□□ -1.42
PPP4R1-213ENST00000579609 PRO0461Q9UI25 63 aa6.18□□□□□ -1.42
PPP4R1-213ENST00000579609 FN1P02751 2386 aaKnown RBP6.18□□□□□ -1.42
PPP4R1-213ENST00000579609 LOC100131303A0A0U1RQF7 123 aa6.17□□□□□ -1.42
PPP4R1-213ENST00000579609 IBA57-AS1B1ANH7 110 aa6.17□□□□□ -1.42
PPP4R1-213ENST00000579609 G3V4G9 280 aa6.17□□□□□ -1.42
PPP4R1-213ENST00000579609 IGHV4-30-4P0DP06 118 aa6.17□□□□□ -1.42
PPP4R1-213ENST00000579609 CXCL5P42830 114 aa6.17□□□□□ -1.42
PPP4R1-213ENST00000579609 SS18Q15532 418 aa6.17□□□□□ -1.42
PPP4R1-213ENST00000579609 DEFB135Q30KP9 77 aa6.17□□□□□ -1.42
PPP4R1-213ENST00000579609 PRIMA1Q86XR5 153 aa6.17□□□□□ -1.42
PPP4R1-213ENST00000579609 COX7B2Q8TF08 81 aa6.17□□□□□ -1.42
PPP4R1-213ENST00000579609 NAA38Q9BRA0 125 aaKnown RBP6.17□□□□□ -1.42
PPP4R1-213ENST00000579609 C11orf68Q9H3H3 251 aaKnown RBP6.17□□□□□ -1.42
PPP4R1-213ENST00000579609 LOC107984156A0A0G2JMH3 177 aa6.16□□□□□ -1.42
PPP4R1-213ENST00000579609 LINC00959A0A1B0GUT2 108 aa6.16□□□□□ -1.42
PPP4R1-213ENST00000579609 PRSS2P07478 247 aa6.16□□□□□ -1.42
PPP4R1-213ENST00000579609 GAGE6Q13070 117 aa6.16□□□□□ -1.42
PPP4R1-213ENST00000579609 ARL17AQ8IVW1 177 aa6.16□□□□□ -1.42
PPP4R1-213ENST00000579609 Q8IZM0 81 aa6.16□□□□□ -1.42
PPP4R1-213ENST00000579609 LINC00308Q8TCZ7 52 aa6.16□□□□□ -1.42
PPP4R1-213ENST00000579609 ATXN8Q156A1 80 aa6.15□□□□□ -1.42
PPP4R1-213ENST00000579609 MEIG1Q5JSS6 88 aa6.15□□□□□ -1.42
PPP4R1-213ENST00000579609 ADAMTSL4-AS1Q5T5F5 129 aa6.15□□□□□ -1.42
PPP4R1-213ENST00000579609 LELP1Q5T871 98 aa6.15□□□□□ -1.42
PPP4R1-213ENST00000579609 ICOSQ9Y6W8 199 aa6.15□□□□□ -1.42
PPP4R1-213ENST00000579609 JMJD1CQ15652 2540 aa6.14□□□□□ -1.43
PPP4R1-213ENST00000579609 IGLV4-60A0A075B6I1 120 aa6.14□□□□□ -1.43
PPP4R1-213ENST00000579609 CD164L2Q6UWJ8 174 aa6.14□□□□□ -1.43
PPP4R1-213ENST00000579609 TRAV13-2A0A0B4J235 113 aa6.13□□□□□ -1.43
PPP4R1-213ENST00000579609 TCL1BO95988 128 aa6.13□□□□□ -1.43
PPP4R1-213ENST00000579609 SCGB1C2P0DMR2 95 aa6.13□□□□□ -1.43
PPP4R1-213ENST00000579609 PSMB2P49721 201 aa6.13□□□□□ -1.43
PPP4R1-213ENST00000579609 COX17Q14061 63 aa6.13□□□□□ -1.43
PPP4R1-213ENST00000579609 Q1RN00 199 aa6.13□□□□□ -1.43
PPP4R1-213ENST00000579609 TEN1Q86WV5 123 aa6.13□□□□□ -1.43
PPP4R1-213ENST00000579609 H3BT86 120 aa6.12□□□□□ -1.43
PPP4R1-213ENST00000579609 C3orf56Q8N813 242 aa6.12□□□□□ -1.43
PPP4R1-213ENST00000579609 SPATA3Q8NHX4 192 aa6.12□□□□□ -1.43
PPP4R1-213ENST00000579609 CARD19Q96LW7 228 aa6.12□□□□□ -1.43
PPP4R1-213ENST00000579609 NOTCH3Q9UM47 2321 aa6.11□□□□□ -1.43
PPP4R1-213ENST00000579609 KRTAP24-1Q3LI83 254 aa6.11□□□□□ -1.43
PPP4R1-213ENST00000579609 PPDPFLQ8WWR9 84 aa6.11□□□□□ -1.43
PPP4R1-213ENST00000579609 VPS25Q9BRG1 176 aa6.11□□□□□ -1.43
PPP4R1-213ENST00000579609 DNHD1Q96M86 4753 aa6.11□□□□□ -1.43
PPP4R1-213ENST00000579609 NBEAL1Q6ZS30 2694 aa6.1□□□□□ -1.43
PPP4R1-213ENST00000579609 COL6A5A8TX70 2615 aa6.1□□□□□ -1.43
PPP4R1-213ENST00000579609 TRAV8-4A0A0B4J246 113 aa6.1□□□□□ -1.43
PPP4R1-213ENST00000579609 TRBV10-2A0A0K0K1G8 114 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms