RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 MAPKAPK5-AS1Q8N8E1 139 aa11.73□□□□□ -0.53
SREBF1-218ENST00000578469 TTTY13Q9BZ97 58 aa11.73□□□□□ -0.53
SREBF1-218ENST00000578469 ZNF815PA8K554 130 aa11.72□□□□□ -0.53
SREBF1-218ENST00000578469 NANOS2P60321 138 aaKnown RBP11.72□□□□□ -0.53
SREBF1-218ENST00000578469 LELP1Q5T871 98 aa11.72□□□□□ -0.53
SREBF1-218ENST00000578469 DEFB131BA0A096LNP1 70 aa11.71□□□□□ -0.53
SREBF1-218ENST00000578469 J3QQQ9 107 aa11.71□□□□□ -0.53
SREBF1-218ENST00000578469 HSD52Q0P140 79 aa11.71□□□□□ -0.53
SREBF1-218ENST00000578469 LINC00242Q5T6M2 205 aa11.71□□□□□ -0.53
SREBF1-218ENST00000578469 IGLV4-60A0A075B6I1 120 aa11.7□□□□□ -0.54
SREBF1-218ENST00000578469 IGLV5-45A0A087WSX0 123 aa11.7□□□□□ -0.54
SREBF1-218ENST00000578469 RBX1P62877 108 aa11.7□□□□□ -0.54
SREBF1-218ENST00000578469 MPV17L2Q567V2 206 aa11.7□□□□□ -0.54
SREBF1-218ENST00000578469 STARD9Q9P2P6 4700 aa11.69□□□□□ -0.54
SREBF1-218ENST00000578469 IGHV1-58A0A0C4DH39 117 aa11.69□□□□□ -0.54
SREBF1-218ENST00000578469 COL5A1-AS1Q5SY13 56 aa11.69□□□□□ -0.54
SREBF1-218ENST00000578469 CSMD3Q7Z407 3707 aa11.68□□□□□ -0.54
SREBF1-218ENST00000578469 TRAV10A0A0B4J240 114 aa11.68□□□□□ -0.54
SREBF1-218ENST00000578469 SCGB1D4Q6XE38 83 aa11.68□□□□□ -0.54
SREBF1-218ENST00000578469 CDKN2A-AS1Q9UH64 79 aa11.68□□□□□ -0.54
SREBF1-218ENST00000578469 IGHV3-64A0A075B6Q5 118 aa11.67□□□□□ -0.54
SREBF1-218ENST00000578469 IGKV3OR2-268A0A0C4DH90 116 aa11.67□□□□□ -0.54
SREBF1-218ENST00000578469 IGHV3-30-3P0DP02 117 aa11.67□□□□□ -0.54
SREBF1-218ENST00000578469 COX6A2Q02221 97 aa11.67□□□□□ -0.54
SREBF1-218ENST00000578469 TAL2Q16559 108 aa11.67□□□□□ -0.54
SREBF1-218ENST00000578469 BVES-AS1Q5T3Y7 98 aa11.67□□□□□ -0.54
SREBF1-218ENST00000578469 LYPD5Q6UWN5 251 aa11.67□□□□□ -0.54
SREBF1-218ENST00000578469 CCL25O15444 150 aa11.66□□□□□ -0.54
SREBF1-218ENST00000578469 SPINK8P0C7L1 97 aa11.66□□□□□ -0.54
SREBF1-218ENST00000578469 TSPEAR-AS2P59090 65 aa11.66□□□□□ -0.54
SREBF1-218ENST00000578469 SS18Q15532 418 aa11.65□□□□□ -0.54
SREBF1-218ENST00000578469 TRAV8-3A0A0A6YYJ7 113 aa11.64□□□□□ -0.55
SREBF1-218ENST00000578469 LINC00959A0A1B0GUT2 108 aa11.64□□□□□ -0.55
SREBF1-218ENST00000578469 ORAOV1Q8WV07 137 aa11.64□□□□□ -0.55
SREBF1-218ENST00000578469 HIST1H4GQ99525 98 aa11.63□□□□□ -0.55
SREBF1-218ENST00000578469 ANGP03950 147 aaKnown RBP11.62□□□□□ -0.55
SREBF1-218ENST00000578469 C15orf53Q8NAA6 179 aa11.62□□□□□ -0.55
SREBF1-218ENST00000578469 IGLV5-39A0A0G2JS06 123 aa11.61□□□□□ -0.55
SREBF1-218ENST00000578469 A6NDN8 102 aa11.61□□□□□ -0.55
SREBF1-218ENST00000578469 GCSHP23434 173 aa11.61□□□□□ -0.55
SREBF1-218ENST00000578469 NDUFA12Q9UI09 145 aa11.61□□□□□ -0.55
SREBF1-218ENST00000578469 SMIM1B2RUZ4 78 aa11.6□□□□□ -0.55
SREBF1-218ENST00000578469 CEND1Q8N111 149 aa11.6□□□□□ -0.55
SREBF1-218ENST00000578469 LINC00269Q8N2A0 174 aa11.6□□□□□ -0.55
SREBF1-218ENST00000578469 PTTG1IPP53801 180 aa11.59□□□□□ -0.55
SREBF1-218ENST00000578469 SRSF9Q13242 221 aaKnown RBP eCLIP11.59□□□□□ -0.55
SREBF1-218ENST00000578469 TM2D2Q9BX73 214 aa11.59□□□□□ -0.55
SREBF1-218ENST00000578469 SPANXB1Q9NS25 103 aaPredicted RBP11.59□□□□□ -0.55
SREBF1-218ENST00000578469 HYDINQ4G0P3 5121 aa11.58□□□□□ -0.56
SREBF1-218ENST00000578469 IGHV3OR16-9A0A0B4J2B5 98 aa11.58□□□□□ -0.56
SREBF1-218ENST00000578469 REG3AQ06141 175 aa11.58□□□□□ -0.56
SREBF1-218ENST00000578469 CLPSL2Q6UWE3 100 aa11.58□□□□□ -0.56
SREBF1-218ENST00000578469 A0A087WZ39 114 aa11.57□□□□□ -0.56
SREBF1-218ENST00000578469 ESRGQ1W209 222 aa11.57□□□□□ -0.56
SREBF1-218ENST00000578469 ALMS1Q8TCU4 4167 aa11.56□□□□□ -0.56
SREBF1-218ENST00000578469 A0A0J9YXY3 114 aa11.56□□□□□ -0.56
SREBF1-218ENST00000578469 TMEM238C9JI98 176 aa11.56□□□□□ -0.56
SREBF1-218ENST00000578469 NDUFA1O15239 70 aa11.56□□□□□ -0.56
SREBF1-218ENST00000578469 XCL1P47992 114 aa11.56□□□□□ -0.56
SREBF1-218ENST00000578469 LINC01561Q8N1V8 128 aa11.56□□□□□ -0.56
SREBF1-218ENST00000578469 A0A1B0GV90 55 aa11.55□□□□□ -0.56
SREBF1-218ENST00000578469 C10orf126Q8N4M7 172 aa11.55□□□□□ -0.56
SREBF1-218ENST00000578469 TMEM238LA0A1B0GVL6 79 aa11.54□□□□□ -0.56
SREBF1-218ENST00000578469 A6NJY4 79 aa11.54□□□□□ -0.56
SREBF1-218ENST00000578469 FXYD2P54710 66 aa11.54□□□□□ -0.56
SREBF1-218ENST00000578469 CD164L2Q6UWJ8 174 aa11.54□□□□□ -0.56
SREBF1-218ENST00000578469 C5orf38Q86SI9 138 aa11.54□□□□□ -0.56
SREBF1-218ENST00000578469 Q8N3U1 123 aa11.54□□□□□ -0.56
SREBF1-218ENST00000578469 CHCHD10Q8WYQ3 142 aaPredicted RBP11.54□□□□□ -0.56
SREBF1-218ENST00000578469 KLK12Q9UKR0 248 aa11.54□□□□□ -0.56
SREBF1-218ENST00000578469 IGHV3-30P01768 117 aa11.53□□□□□ -0.56
SREBF1-218ENST00000578469 IGHV3-33P01772 117 aa11.53□□□□□ -0.56
SREBF1-218ENST00000578469 CRPP02741 224 aa11.53□□□□□ -0.56
SREBF1-218ENST00000578469 IGHV3-30-5P0DP03 117 aa11.53□□□□□ -0.56
SREBF1-218ENST00000578469 HERV-K104P63124 156 aa11.53□□□□□ -0.56
SREBF1-218ENST00000578469 CIRBPQ14011 172 aaKnown RBP11.53□□□□□ -0.56
SREBF1-218ENST00000578469 WFDC10BQ8IUB3 73 aa11.53□□□□□ -0.56
SREBF1-218ENST00000578469 COX7B2Q8TF08 81 aa11.53□□□□□ -0.56
SREBF1-218ENST00000578469 PRR34Q9NV39 138 aa11.53□□□□□ -0.56
SREBF1-218ENST00000578469 PLECQ15149 4684 aaKnown RBP11.53□□□□□ -0.56
SREBF1-218ENST00000578469 TIMM17BO60830 172 aa11.52□□□□□ -0.57
SREBF1-218ENST00000578469 SMIM13P0DJ93 91 aa11.52□□□□□ -0.57
SREBF1-218ENST00000578469 Q9H8V8 135 aa11.52□□□□□ -0.57
SREBF1-218ENST00000578469 TRAV8-4A0A0B4J246 113 aa11.51□□□□□ -0.57
SREBF1-218ENST00000578469 IGLL5B9A064 214 aa11.51□□□□□ -0.57
SREBF1-218ENST00000578469 COX7A2LO14548 114 aa11.51□□□□□ -0.57
SREBF1-218ENST00000578469 SFTA2Q6UW10 78 aa11.51□□□□□ -0.57
SREBF1-218ENST00000578469 Q6ZVH6 145 aa11.51□□□□□ -0.57
SREBF1-218ENST00000578469 TOMM7Q9P0U1 55 aa11.51□□□□□ -0.57
SREBF1-218ENST00000578469 TAX1BP3O14907 124 aa11.5□□□□□ -0.57
SREBF1-218ENST00000578469 CCL18P55774 89 aa11.5□□□□□ -0.57
SREBF1-218ENST00000578469 IGLV10-54A0A075B6I4 117 aa11.49□□□□□ -0.57
SREBF1-218ENST00000578469 PRSS2P07478 247 aa11.49□□□□□ -0.57
SREBF1-218ENST00000578469 MALP21145 153 aa11.49□□□□□ -0.57
SREBF1-218ENST00000578469 LINC01556Q5JQF7 62 aa11.49□□□□□ -0.57
SREBF1-218ENST00000578469 UBE2WQ96B02 151 aa11.49□□□□□ -0.57
SREBF1-218ENST00000578469 ZNF625Q96I27 306 aaPredicted RBP11.49□□□□□ -0.57
SREBF1-218ENST00000578469 SPANXDQ9BXN6 97 aa11.49□□□□□ -0.57
SREBF1-218ENST00000578469 NHP2Q9NX24 153 aaKnown RBP11.49□□□□□ -0.57
SREBF1-218ENST00000578469 SPANXCQ9NY87 97 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms