RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 PRIMA1Q86XR5 153 aa6.32□□□□□ -1.4
NCBP3-204ENST00000574911 PPDPFQ9H3Y8 114 aa6.32□□□□□ -1.4
NCBP3-204ENST00000574911 ABCA12Q86UK0 2595 aa6.31□□□□□ -1.4
NCBP3-204ENST00000574911 UBE2WQ96B02 151 aa6.31□□□□□ -1.4
NCBP3-204ENST00000574911 A0A0U1RRA0 63 aa6.31□□□□□ -1.4
NCBP3-204ENST00000574911 TEX49A0A1B0GTD5 131 aa6.31□□□□□ -1.4
NCBP3-204ENST00000574911 A0A1B0GV72 72 aa6.31□□□□□ -1.4
NCBP3-204ENST00000574911 PLA2G2AP14555 144 aa6.31□□□□□ -1.4
NCBP3-204ENST00000574911 FHL2Q14192 279 aa6.31□□□□□ -1.4
NCBP3-204ENST00000574911 CHD6Q8TD26 2715 aa6.3□□□□□ -1.4
NCBP3-204ENST00000574911 TRGV4A0A0C4DH28 118 aa6.3□□□□□ -1.4
NCBP3-204ENST00000574911 MEIG1Q5JSS6 88 aa6.3□□□□□ -1.4
NCBP3-204ENST00000574911 ITPR3Q14573 2671 aa6.3□□□□□ -1.4
NCBP3-204ENST00000574911 CKS1BP61024 79 aa6.3□□□□□ -1.4
NCBP3-204ENST00000574911 SHISA2Q6UWI4 295 aa6.3□□□□□ -1.4
NCBP3-204ENST00000574911 GAGE6Q13070 117 aa6.29□□□□□ -1.4
NCBP3-204ENST00000574911 TRAV8-4A0A0B4J246 113 aa6.29□□□□□ -1.4
NCBP3-204ENST00000574911 COX7A2LO14548 114 aa6.29□□□□□ -1.4
NCBP3-204ENST00000574911 PF4P02776 101 aa6.29□□□□□ -1.4
NCBP3-204ENST00000574911 HILS1P60008 231 aa6.29□□□□□ -1.4
NCBP3-204ENST00000574911 DEFB121Q5J5C9 76 aa6.29□□□□□ -1.4
NCBP3-204ENST00000574911 CITED1Q99966 193 aa6.29□□□□□ -1.4
NCBP3-204ENST00000574911 TRBV6-8A0A0A6YYG3 113 aa6.28□□□□□ -1.4
NCBP3-204ENST00000574911 COX7B2Q8TF08 81 aa6.28□□□□□ -1.4
NCBP3-204ENST00000574911 IGLV4-60A0A075B6I1 120 aa6.28□□□□□ -1.4
NCBP3-204ENST00000574911 MYO9AB2RTY4 2548 aa6.27□□□□□ -1.41
NCBP3-204ENST00000574911 KRTAP10-3P60369 221 aa6.27□□□□□ -1.41
NCBP3-204ENST00000574911 LINC00612Q8N6U2 182 aa6.27□□□□□ -1.41
NCBP3-204ENST00000574911 EPG5Q9HCE0 2579 aa6.27□□□□□ -1.41
NCBP3-204ENST00000574911 PDZD2O15018 2839 aa6.27□□□□□ -1.41
NCBP3-204ENST00000574911 KIR2DL5BQ8NHK3 375 aa6.27□□□□□ -1.41
NCBP3-204ENST00000574911 IGHV3OR16-9A0A0B4J2B5 98 aa6.26□□□□□ -1.41
NCBP3-204ENST00000574911 CHCHD5Q9BSY4 110 aa6.26□□□□□ -1.41
NCBP3-204ENST00000574911 CRLF1O75462 422 aa6.25□□□□□ -1.41
NCBP3-204ENST00000574911 FAM222AQ5U5X8 452 aa6.25□□□□□ -1.41
NCBP3-204ENST00000574911 A0A087WZ39 114 aa6.25□□□□□ -1.41
NCBP3-204ENST00000574911 IGKV3OR2-268A0A0C4DH90 116 aa6.25□□□□□ -1.41
NCBP3-204ENST00000574911 MIR7-3HGQ8N6C7 128 aa6.25□□□□□ -1.41
NCBP3-204ENST00000574911 LINC00482Q8N8I6 264 aa6.25□□□□□ -1.41
NCBP3-204ENST00000574911 TRAV13-2A0A0B4J235 113 aa6.24□□□□□ -1.41
NCBP3-204ENST00000574911 FAM240AA0A1B0GVK7 77 aa6.24□□□□□ -1.41
NCBP3-204ENST00000574911 SNCGO76070 127 aa6.24□□□□□ -1.41
NCBP3-204ENST00000574911 TRACP01848 142 aa6.24□□□□□ -1.41
NCBP3-204ENST00000574911 TOMM7Q9P0U1 55 aa6.24□□□□□ -1.41
NCBP3-204ENST00000574911 SETXQ7Z333 2677 aaKnown RBP6.24□□□□□ -1.41
NCBP3-204ENST00000574911 DEFB130BP0DP73 79 aa6.24□□□□□ -1.41
NCBP3-204ENST00000574911 DEFB130AP0DP74 79 aa6.24□□□□□ -1.41
NCBP3-204ENST00000574911 RPL28P46779 137 aaKnown RBP6.24□□□□□ -1.41
NCBP3-204ENST00000574911 IGKV2-28A0A075B6P5 120 aa6.23□□□□□ -1.41
NCBP3-204ENST00000574911 LINC00959A0A1B0GUT2 108 aa6.23□□□□□ -1.41
NCBP3-204ENST00000574911 IGKV2D-28P01615 120 aa6.23□□□□□ -1.41
NCBP3-204ENST00000574911 MRPL23Q16540 153 aaKnown RBP6.23□□□□□ -1.41
NCBP3-204ENST00000574911 Q6Q795 121 aa6.23□□□□□ -1.41
NCBP3-204ENST00000574911 C15orf53Q8NAA6 179 aa6.23□□□□□ -1.41
NCBP3-204ENST00000574911 X6R8D5 127 aa6.23□□□□□ -1.41
NCBP3-204ENST00000574911 FLNAP21333 2647 aaKnown RBP6.23□□□□□ -1.41
NCBP3-204ENST00000574911 TENM4Q6N022 2769 aa6.23□□□□□ -1.41
NCBP3-204ENST00000574911 GAGE2BQ13066 116 aa6.23□□□□□ -1.41
NCBP3-204ENST00000574911 GAGE2EQ4V326 116 aa6.23□□□□□ -1.41
NCBP3-204ENST00000574911 FAM218AQ96MZ4 157 aa6.23□□□□□ -1.41
NCBP3-204ENST00000574911 SND1-IT1Q9HBX3 110 aa6.23□□□□□ -1.41
NCBP3-204ENST00000574911 GAGE2DQ9UEU5 116 aa6.23□□□□□ -1.41
NCBP3-204ENST00000574911 NF1P21359 2839 aa6.23□□□□□ -1.41
NCBP3-204ENST00000574911 IBA57-AS1B1ANH7 110 aa6.22□□□□□ -1.41
NCBP3-204ENST00000574911 GYPEP15421 78 aa6.22□□□□□ -1.41
NCBP3-204ENST00000574911 C5orf38Q86SI9 138 aa6.22□□□□□ -1.41
NCBP3-204ENST00000574911 LINC00337Q8N6G1 96 aa6.22□□□□□ -1.41
NCBP3-204ENST00000574911 SONP18583 2426 aaKnown RBP6.22□□□□□ -1.41
NCBP3-204ENST00000574911 SMIM9A6NGZ8 99 aa6.22□□□□□ -1.41
NCBP3-204ENST00000574911 CRPP02741 224 aa6.22□□□□□ -1.41
NCBP3-204ENST00000574911 LINC00158P58513 81 aa6.22□□□□□ -1.41
NCBP3-204ENST00000574911 TLN2Q9Y4G6 2542 aa6.22□□□□□ -1.41
NCBP3-204ENST00000574911 WNK1Q9H4A3 2382 aa6.21□□□□□ -1.41
NCBP3-204ENST00000574911 A0A1B0GUV1 79 aa6.21□□□□□ -1.41
NCBP3-204ENST00000574911 J3QKU1 62 aa6.21□□□□□ -1.41
NCBP3-204ENST00000574911 CCL18P55774 89 aa6.21□□□□□ -1.41
NCBP3-204ENST00000574911 SMR3AQ99954 134 aa6.21□□□□□ -1.41
NCBP3-204ENST00000574911 C22orf24Q9Y442 160 aa6.21□□□□□ -1.41
NCBP3-204ENST00000574911 NIPBLQ6KC79 2804 aaeCLIP6.21□□□□□ -1.42
NCBP3-204ENST00000574911 BAALC-AS2P0C853 105 aa6.2□□□□□ -1.42
NCBP3-204ENST00000574911 TTC32Q5I0X7 151 aa6.2□□□□□ -1.42
NCBP3-204ENST00000574911 ANAPC13Q9BS18 74 aa6.2□□□□□ -1.42
NCBP3-204ENST00000574911 PRO0255Q9UI72 69 aa6.2□□□□□ -1.42
NCBP3-204ENST00000574911 TRAV26-1A0A087WT03 109 aa6.19□□□□□ -1.42
NCBP3-204ENST00000574911 ACYP1P07311 99 aa6.19□□□□□ -1.42
NCBP3-204ENST00000574911 SS18Q15532 418 aa6.19□□□□□ -1.42
NCBP3-204ENST00000574911 LINC01561Q8N1V8 128 aa6.19□□□□□ -1.42
NCBP3-204ENST00000574911 NHLRC4P0CG21 123 aaPredicted RBP6.19□□□□□ -1.42
NCBP3-204ENST00000574911 NDUFV3P56181 108 aaKnown RBP6.19□□□□□ -1.42
NCBP3-204ENST00000574911 SMIM11BQ8TCY0 68 aa6.19□□□□□ -1.42
NCBP3-204ENST00000574911 LYRM9A8MSI8 78 aa6.19□□□□□ -1.42
NCBP3-204ENST00000574911 PFN2P35080 140 aa6.19□□□□□ -1.42
NCBP3-204ENST00000574911 XCL1P47992 114 aa6.19□□□□□ -1.42
NCBP3-204ENST00000574911 SPATA3Q8NHX4 192 aa6.19□□□□□ -1.42
NCBP3-204ENST00000574911 C6orf226Q5I0X4 101 aa6.18□□□□□ -1.42
NCBP3-204ENST00000574911 Q8IZM0 81 aa6.18□□□□□ -1.42
NCBP3-204ENST00000574911 LY6G6DO95868 133 aa6.18□□□□□ -1.42
NCBP3-204ENST00000574911 C9orf66Q5T8R8 295 aa6.18□□□□□ -1.42
NCBP3-204ENST00000574911 PAX4O43316 350 aa6.17□□□□□ -1.42
NCBP3-204ENST00000574911 MALP21145 153 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms