RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 NOTCH2Q04721 2471 aa7.96□□□□□ -1.13
RPAIN-212ENST00000573126 IGLV1-51P01701 117 aa7.96□□□□□ -1.14
RPAIN-212ENST00000573126 COX6CP09669 75 aa7.96□□□□□ -1.14
RPAIN-212ENST00000573126 IFITM1P13164 125 aa7.96□□□□□ -1.14
RPAIN-212ENST00000573126 PRIMA1Q86XR5 153 aa7.96□□□□□ -1.14
RPAIN-212ENST00000573126 LINC00308Q8TCZ7 52 aa7.96□□□□□ -1.14
RPAIN-212ENST00000573126 C16orf74Q96GX8 76 aa7.96□□□□□ -1.14
RPAIN-212ENST00000573126 ANK3Q12955 4377 aaKnown RBP7.96□□□□□ -1.14
RPAIN-212ENST00000573126 IGKV3OR2-268A0A0C4DH90 116 aa7.95□□□□□ -1.14
RPAIN-212ENST00000573126 RNASE1P07998 156 aaKnown RBP7.95□□□□□ -1.14
RPAIN-212ENST00000573126 NBEAL2Q6ZNJ1 2754 aa7.95□□□□□ -1.14
RPAIN-212ENST00000573126 TMEM243Q9BU79 118 aa7.95□□□□□ -1.14
RPAIN-212ENST00000573126 UNC79Q9P2D8 2635 aa7.95□□□□□ -1.14
RPAIN-212ENST00000573126 TRBV10-2A0A0K0K1G8 114 aa7.95□□□□□ -1.14
RPAIN-212ENST00000573126 MEIG1Q5JSS6 88 aa7.95□□□□□ -1.14
RPAIN-212ENST00000573126 HIVEP2P31629 2446 aa7.95□□□□□ -1.14
RPAIN-212ENST00000573126 TRGV4A0A0C4DH28 118 aa7.94□□□□□ -1.14
RPAIN-212ENST00000573126 F5H768 121 aa7.94□□□□□ -1.14
RPAIN-212ENST00000573126 SOSTDC1Q6X4U4 206 aa7.94□□□□□ -1.14
RPAIN-212ENST00000573126 H7C423 109 aa7.94□□□□□ -1.14
RPAIN-212ENST00000573126 M0QXV9 152 aa7.94□□□□□ -1.14
RPAIN-212ENST00000573126 C2orf82Q6UX34 121 aa7.94□□□□□ -1.14
RPAIN-212ENST00000573126 CSNK1G2-AS1Q8NCQ2 148 aa7.94□□□□□ -1.14
RPAIN-212ENST00000573126 RNF183Q96D59 192 aa7.94□□□□□ -1.14
RPAIN-212ENST00000573126 GAGE6Q13070 117 aa7.93□□□□□ -1.14
RPAIN-212ENST00000573126 FAM19A3Q7Z5A8 133 aa7.93□□□□□ -1.14
RPAIN-212ENST00000573126 C16orf95Q9H693 158 aa7.93□□□□□ -1.14
RPAIN-212ENST00000573126 TRBV6-4A0A1B0GX49 114 aa7.92□□□□□ -1.14
RPAIN-212ENST00000573126 TMEM262E9PQX1 116 aa7.92□□□□□ -1.14
RPAIN-212ENST00000573126 LST1O00453 97 aa7.92□□□□□ -1.14
RPAIN-212ENST00000573126 CMC4P56277 68 aaPredicted RBP7.92□□□□□ -1.14
RPAIN-212ENST00000573126 IGLV4-60A0A075B6I1 120 aa7.91□□□□□ -1.14
RPAIN-212ENST00000573126 A0A1B0GV72 72 aa7.91□□□□□ -1.14
RPAIN-212ENST00000573126 DEFB130BP0DP73 79 aa7.91□□□□□ -1.14
RPAIN-212ENST00000573126 DEFB130AP0DP74 79 aa7.91□□□□□ -1.14
RPAIN-212ENST00000573126 UBE2WQ96B02 151 aa7.91□□□□□ -1.14
RPAIN-212ENST00000573126 SMR3AQ99954 134 aa7.91□□□□□ -1.14
RPAIN-212ENST00000573126 TOMM7Q9P0U1 55 aa7.91□□□□□ -1.14
RPAIN-212ENST00000573126 VWFP04275 2813 aa7.91□□□□□ -1.14
RPAIN-212ENST00000573126 CKS1BP61024 79 aa7.91□□□□□ -1.14
RPAIN-212ENST00000573126 FAM110AQ9BQ89 295 aa7.91□□□□□ -1.14
RPAIN-212ENST00000573126 OVOL2Q9BRP0 275 aa7.9□□□□□ -1.14
RPAIN-212ENST00000573126 CHCHD5Q9BSY4 110 aa7.9□□□□□ -1.14
RPAIN-212ENST00000573126 FHL2Q14192 279 aa7.9□□□□□ -1.15
RPAIN-212ENST00000573126 HILS1P60008 231 aa7.89□□□□□ -1.15
RPAIN-212ENST00000573126 TRBV6-8A0A0A6YYG3 113 aa7.89□□□□□ -1.15
RPAIN-212ENST00000573126 CRLF1O75462 422 aa7.89□□□□□ -1.15
RPAIN-212ENST00000573126 H3BT86 120 aa7.88□□□□□ -1.15
RPAIN-212ENST00000573126 HECTD1Q9ULT8 2610 aa7.88□□□□□ -1.15
RPAIN-212ENST00000573126 HERV-K104P63124 156 aa7.88□□□□□ -1.15
RPAIN-212ENST00000573126 LINC01600Q96MT4 127 aa7.88□□□□□ -1.15
RPAIN-212ENST00000573126 TRAV8-4A0A0B4J246 113 aa7.87□□□□□ -1.15
RPAIN-212ENST00000573126 PF4P02776 101 aa7.87□□□□□ -1.15
RPAIN-212ENST00000573126 COX7B2Q8TF08 81 aa7.87□□□□□ -1.15
RPAIN-212ENST00000573126 COPS9Q8WXC6 57 aa7.87□□□□□ -1.15
RPAIN-212ENST00000573126 COX7A2LO14548 114 aa7.87□□□□□ -1.15
RPAIN-212ENST00000573126 KRTAP10-3P60369 221 aa7.87□□□□□ -1.15
RPAIN-212ENST00000573126 MIR7-3HGQ8N6C7 128 aa7.87□□□□□ -1.15
RPAIN-212ENST00000573126 SHISA2Q6UWI4 295 aa7.86□□□□□ -1.15
RPAIN-212ENST00000573126 C5orf38Q86SI9 138 aa7.86□□□□□ -1.15
RPAIN-212ENST00000573126 IGHV3OR16-9A0A0B4J2B5 98 aa7.86□□□□□ -1.15
RPAIN-212ENST00000573126 SNCGO76070 127 aa7.85□□□□□ -1.15
RPAIN-212ENST00000573126 A0A096LPF7 62 aa7.85□□□□□ -1.15
RPAIN-212ENST00000573126 J3QKU1 62 aa7.84□□□□□ -1.15
RPAIN-212ENST00000573126 GYPEP15421 78 aa7.84□□□□□ -1.15
RPAIN-212ENST00000573126 CITED1Q99966 193 aa7.84□□□□□ -1.15
RPAIN-212ENST00000573126 C11orf68Q9H3H3 251 aaKnown RBP7.84□□□□□ -1.15
RPAIN-212ENST00000573126 LINC00158P58513 81 aa7.84□□□□□ -1.15
RPAIN-212ENST00000573126 SPATA3Q8NHX4 192 aa7.84□□□□□ -1.15
RPAIN-212ENST00000573126 PFN2P35080 140 aa7.83□□□□□ -1.16
RPAIN-212ENST00000573126 CLPSL2Q6UWE3 100 aa7.83□□□□□ -1.16
RPAIN-212ENST00000573126 LINC00337Q8N6G1 96 aa7.83□□□□□ -1.16
RPAIN-212ENST00000573126 FAM218AQ96MZ4 157 aa7.83□□□□□ -1.16
RPAIN-212ENST00000573126 OTOGQ6ZRI0 2925 aa7.83□□□□□ -1.16
RPAIN-212ENST00000573126 BAHCC1Q9P281 2608 aa7.83□□□□□ -1.16
RPAIN-212ENST00000573126 SND1-IT1Q9HBX3 110 aa7.83□□□□□ -1.16
RPAIN-212ENST00000573126 XCL1P47992 114 aa7.82□□□□□ -1.16
RPAIN-212ENST00000573126 LINC00482Q8N8I6 264 aa7.82□□□□□ -1.16
RPAIN-212ENST00000573126 C15orf53Q8NAA6 179 aa7.82□□□□□ -1.16
RPAIN-212ENST00000573126 IGKV2-28A0A075B6P5 120 aa7.82□□□□□ -1.16
RPAIN-212ENST00000573126 A0A087WZ39 114 aa7.82□□□□□ -1.16
RPAIN-212ENST00000573126 LINC00959A0A1B0GUT2 108 aa7.82□□□□□ -1.16
RPAIN-212ENST00000573126 DEFB4AO15263 64 aa7.82□□□□□ -1.16
RPAIN-212ENST00000573126 IGKV2D-28P01615 120 aa7.82□□□□□ -1.16
RPAIN-212ENST00000573126 CRPP02741 224 aa7.82□□□□□ -1.16
RPAIN-212ENST00000573126 GAGE2BQ13066 116 aa7.82□□□□□ -1.16
RPAIN-212ENST00000573126 GAGE2EQ4V326 116 aa7.82□□□□□ -1.16
RPAIN-212ENST00000573126 TTC32Q5I0X7 151 aa7.82□□□□□ -1.16
RPAIN-212ENST00000573126 GAGE2DQ9UEU5 116 aa7.82□□□□□ -1.16
RPAIN-212ENST00000573126 KIR2DL5BQ8NHK3 375 aa7.81□□□□□ -1.16
RPAIN-212ENST00000573126 X6R8D5 127 aa7.81□□□□□ -1.16
RPAIN-212ENST00000573126 TENM1Q9UKZ4 2725 aa7.81□□□□□ -1.16
RPAIN-212ENST00000573126 TRAV13-2A0A0B4J235 113 aa7.8□□□□□ -1.16
RPAIN-212ENST00000573126 ANAPC13Q9BS18 74 aa7.8□□□□□ -1.16
RPAIN-212ENST00000573126 Q9HAA7 133 aa7.8□□□□□ -1.16
RPAIN-212ENST00000573126 FLNBO75369 2602 aaKnown RBP7.8□□□□□ -1.16
RPAIN-212ENST00000573126 TRAV26-1A0A087WT03 109 aa7.8□□□□□ -1.16
RPAIN-212ENST00000573126 CCL18P55774 89 aa7.8□□□□□ -1.16
RPAIN-212ENST00000573126 FAM222AQ5U5X8 452 aa7.8□□□□□ -1.16
RPAIN-212ENST00000573126 TRRAPQ9Y4A5 3859 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms