RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 LINC00269Q8N2A0 174 aa9.19□□□□□ -0.94
RPAIN-209ENST00000571558 KRTAP1-5Q9BYS1 174 aa9.19□□□□□ -0.94
RPAIN-209ENST00000571558 VCX2Q9H322 139 aa9.19□□□□□ -0.94
RPAIN-209ENST00000571558 CST9LQ9H4G1 147 aa9.19□□□□□ -0.94
RPAIN-209ENST00000571558 KLK12Q9UKR0 248 aa9.19□□□□□ -0.94
RPAIN-209ENST00000571558 FAT1Q14517 4588 aa9.18□□□□□ -0.94
RPAIN-209ENST00000571558 TRAV12-1A0A0B4J245 112 aa9.18□□□□□ -0.94
RPAIN-209ENST00000571558 K7EP13 123 aa9.18□□□□□ -0.94
RPAIN-209ENST00000571558 EREGO14944 169 aa9.18□□□□□ -0.94
RPAIN-209ENST00000571558 AKR1D1P51857 326 aa9.18□□□□□ -0.94
RPAIN-209ENST00000571558 PMVKQ15126 192 aa9.18□□□□□ -0.94
RPAIN-209ENST00000571558 ENHOQ6UWT2 76 aa9.18□□□□□ -0.94
RPAIN-209ENST00000571558 TEX43Q6ZNM6 134 aa9.18□□□□□ -0.94
RPAIN-209ENST00000571558 MAP1LC3CQ9BXW4 147 aa9.18□□□□□ -0.94
RPAIN-209ENST00000571558 IBA57-AS1B1ANH7 110 aa9.17□□□□□ -0.94
RPAIN-209ENST00000571558 SYS1-DBNDD2H3BUS1 97 aa9.17□□□□□ -0.94
RPAIN-209ENST00000571558 PRSS1P07477 247 aa9.17□□□□□ -0.94
RPAIN-209ENST00000571558 REG3AQ06141 175 aa9.17□□□□□ -0.94
RPAIN-209ENST00000571558 UBE2D1P51668 147 aa9.16□□□□□ -0.94
RPAIN-209ENST00000571558 KRTDAPP60985 99 aa9.16□□□□□ -0.94
RPAIN-209ENST00000571558 ODF1Q14990 250 aa9.16□□□□□ -0.94
RPAIN-209ENST00000571558 CLPSL2Q6UWE3 100 aa9.16□□□□□ -0.94
RPAIN-209ENST00000571558 OR10D4PQ8NGN7 298 aa9.16□□□□□ -0.94
RPAIN-209ENST00000571558 TRAV9-2A0A087WT02 112 aa9.15□□□□□ -0.94
RPAIN-209ENST00000571558 LINC00959A0A1B0GUT2 108 aa9.15□□□□□ -0.94
RPAIN-209ENST00000571558 FAM19A3Q7Z5A8 133 aa9.15□□□□□ -0.94
RPAIN-209ENST00000571558 C10orf126Q8N4M7 172 aa9.15□□□□□ -0.94
RPAIN-209ENST00000571558 VPS13BQ7Z7G8 4022 aa9.15□□□□□ -0.95
RPAIN-209ENST00000571558 FLG2Q5D862 2391 aaPredicted RBP9.15□□□□□ -0.95
RPAIN-209ENST00000571558 IGLV4-69A0A075B6H9 119 aa9.14□□□□□ -0.95
RPAIN-209ENST00000571558 FAM229AH3BQW9 127 aa9.14□□□□□ -0.95
RPAIN-209ENST00000571558 SMIM6P0DI80 62 aa9.14□□□□□ -0.95
RPAIN-209ENST00000571558 PET117Q6UWS5 81 aa9.14□□□□□ -0.95
RPAIN-209ENST00000571558 UBE2WQ96B02 151 aa9.14□□□□□ -0.95
RPAIN-209ENST00000571558 C2orf88Q9BSF0 95 aa9.14□□□□□ -0.95
RPAIN-209ENST00000571558 TRAV13-1A0A0B4J241 112 aa9.14□□□□□ -0.95
RPAIN-209ENST00000571558 IGKV3OR2-268A0A0C4DH90 116 aa9.14□□□□□ -0.95
RPAIN-209ENST00000571558 H0Y8G0 127 aa9.14□□□□□ -0.95
RPAIN-209ENST00000571558 MIAQ16674 131 aa9.14□□□□□ -0.95
RPAIN-209ENST00000571558 LINC01545Q5VT33 79 aa9.14□□□□□ -0.95
RPAIN-209ENST00000571558 Q6ZRN7 208 aaPredicted RBP9.14□□□□□ -0.95
RPAIN-209ENST00000571558 MRPL35Q9NZE8 188 aaKnown RBP9.14□□□□□ -0.95
RPAIN-209ENST00000571558 CHTOPQ9Y3Y2 248 aaKnown RBP9.14□□□□□ -0.95
RPAIN-209ENST00000571558 A0A0J9YXV3 536 aa9.13□□□□□ -0.95
RPAIN-209ENST00000571558 CCL25O15444 150 aa9.13□□□□□ -0.95
RPAIN-209ENST00000571558 LINC00242Q5T6M2 205 aa9.13□□□□□ -0.95
RPAIN-209ENST00000571558 KRTAP26-1Q6PEX3 210 aa9.13□□□□□ -0.95
RPAIN-209ENST00000571558 LINC00518Q8N0U6 118 aa9.13□□□□□ -0.95
RPAIN-209ENST00000571558 F8VRH5 84 aa9.12□□□□□ -0.95
RPAIN-209ENST00000571558 CRPP02741 224 aa9.12□□□□□ -0.95
RPAIN-209ENST00000571558 IGLC3P0DOY3 106 aa9.12□□□□□ -0.95
RPAIN-209ENST00000571558 NFE4Q86UQ8 179 aa9.12□□□□□ -0.95
RPAIN-209ENST00000571558 PMCHL2Q9BQD1 86 aa9.12□□□□□ -0.95
RPAIN-209ENST00000571558 TRAV8-3A0A0A6YYJ7 113 aa9.11□□□□□ -0.95
RPAIN-209ENST00000571558 TRAV8-4A0A0B4J246 113 aa9.11□□□□□ -0.95
RPAIN-209ENST00000571558 TINCRA0A1B0GVN0 87 aa9.11□□□□□ -0.95
RPAIN-209ENST00000571558 COX6A2Q02221 97 aa9.11□□□□□ -0.95
RPAIN-209ENST00000571558 SS18Q15532 418 aa9.11□□□□□ -0.95
RPAIN-209ENST00000571558 CHCHD10Q8WYQ3 142 aaPredicted RBP9.11□□□□□ -0.95
RPAIN-209ENST00000571558 UBR4Q5T4S7 5183 aa9.1□□□□□ -0.95
RPAIN-209ENST00000571558 IGLV10-54A0A075B6I4 117 aa9.1□□□□□ -0.95
RPAIN-209ENST00000571558 C11orf86A6NJI1 115 aa9.1□□□□□ -0.95
RPAIN-209ENST00000571558 Q9HAA7 133 aa9.1□□□□□ -0.95
RPAIN-209ENST00000571558 IGLV5-45A0A087WSX0 123 aa9.09□□□□□ -0.95
RPAIN-209ENST00000571558 IGHV3OR16-9A0A0B4J2B5 98 aa9.09□□□□□ -0.95
RPAIN-209ENST00000571558 DPM2O94777 84 aa9.08□□□□□ -0.96
RPAIN-209ENST00000571558 PLNP26678 52 aa9.08□□□□□ -0.96
RPAIN-209ENST00000571558 XCL1P47992 114 aa9.08□□□□□ -0.96
RPAIN-209ENST00000571558 HERVK_113P63121 156 aa9.08□□□□□ -0.96
RPAIN-209ENST00000571558 SEC11AP67812 179 aa9.08□□□□□ -0.96
RPAIN-209ENST00000571558 FOXI1Q12951 378 aa9.08□□□□□ -0.96
RPAIN-209ENST00000571558 JOSD1Q15040 202 aaPredicted RBP9.08□□□□□ -0.96
RPAIN-209ENST00000571558 CD164L2Q6UWJ8 174 aa9.08□□□□□ -0.96
RPAIN-209ENST00000571558 CHAC1Q9BUX1 264 aa9.08□□□□□ -0.96
RPAIN-209ENST00000571558 C20orf202A1L168 122 aa9.07□□□□□ -0.96
RPAIN-209ENST00000571558 IGKCP01834 107 aa9.07□□□□□ -0.96
RPAIN-209ENST00000571558 KRTAP10-1P60331 282 aa9.07□□□□□ -0.96
RPAIN-209ENST00000571558 SERTAD4-AS1Q5TG53 156 aa9.07□□□□□ -0.96
RPAIN-209ENST00000571558 C12orf57Q99622 126 aa9.07□□□□□ -0.96
RPAIN-209ENST00000571558 C1orf43Q9BWL3 253 aa9.07□□□□□ -0.96
RPAIN-209ENST00000571558 CDKN2A-AS1Q9UH64 79 aa9.07□□□□□ -0.96
RPAIN-209ENST00000571558 IGKV2D-24A0A075B6R9 120 aa9.06□□□□□ -0.96
RPAIN-209ENST00000571558 GAGE12HA6NDE8 117 aa9.06□□□□□ -0.96
RPAIN-209ENST00000571558 ZNF22P17026 224 aaPredicted RBP9.06□□□□□ -0.96
RPAIN-209ENST00000571558 PYY3Q5JQD4 70 aa9.06□□□□□ -0.96
RPAIN-209ENST00000571558 GEMIN7Q9H840 131 aaKnown RBP9.06□□□□□ -0.96
RPAIN-209ENST00000571558 A0A087WTM6 91 aa9.05□□□□□ -0.96
RPAIN-209ENST00000571558 A0A087WZ39 114 aa9.05□□□□□ -0.96
RPAIN-209ENST00000571558 SCGB1D1O95968 90 aa9.05□□□□□ -0.96
RPAIN-209ENST00000571558 SMR3BP02814 79 aaPredicted RBP9.05□□□□□ -0.96
RPAIN-209ENST00000571558 RMI2Q96E14 147 aa9.05□□□□□ -0.96
RPAIN-209ENST00000571558 GCSHP23434 173 aa9.05□□□□□ -0.96
RPAIN-209ENST00000571558 LINC00469Q8N7U9 141 aa9.05□□□□□ -0.96
RPAIN-209ENST00000571558 KRTAP29-1A8MX34 341 aaPredicted RBP9.04□□□□□ -0.96
RPAIN-209ENST00000571558 C5orf38Q86SI9 138 aa9.04□□□□□ -0.96
RPAIN-209ENST00000571558 ATOH7Q8N100 152 aa9.04□□□□□ -0.96
RPAIN-209ENST00000571558 TMEM223A0PJW6 202 aa9.03□□□□□ -0.96
RPAIN-209ENST00000571558 COX7A2LO14548 114 aa9.03□□□□□ -0.96
RPAIN-209ENST00000571558 TMEM170BQ5T4T1 132 aa9.03□□□□□ -0.96
RPAIN-209ENST00000571558 LINC01561Q8N1V8 128 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms