RNA–Protein interactions for RNA: ENST00000569335.1

HERC2-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-211ENST00000569335 EMP1P54849 157 aa4.58□□□□□ -1.68
HERC2-211ENST00000569335 RPL24P83731 157 aaKnown RBP4.58□□□□□ -1.68
HERC2-211ENST00000569335 SRSF9Q13242 221 aaKnown RBP eCLIP4.58□□□□□ -1.68
HERC2-211ENST00000569335 LINC00242Q5T6M2 205 aa4.58□□□□□ -1.68
HERC2-211ENST00000569335 LYRM7Q5U5X0 104 aa4.58□□□□□ -1.68
HERC2-211ENST00000569335 C10orf126Q8N4M7 172 aa4.58□□□□□ -1.68
HERC2-211ENST00000569335 LITAFQ99732 161 aa4.58□□□□□ -1.68
HERC2-211ENST00000569335 TMEM243Q9BU79 118 aa4.58□□□□□ -1.68
HERC2-211ENST00000569335 KRTAP9-8Q9BYQ0 159 aa4.58□□□□□ -1.68
HERC2-211ENST00000569335 WFDC10AQ9H1F0 79 aa4.58□□□□□ -1.68
HERC2-211ENST00000569335 SPCS1Q9Y6A9 102 aa4.58□□□□□ -1.68
HERC2-211ENST00000569335 NSD1Q96L73 2696 aaPredicted RBP4.57□□□□□ -1.68
HERC2-211ENST00000569335 TRGV2A0A075B6R0 118 aa4.57□□□□□ -1.68
HERC2-211ENST00000569335 A0A1B0GUV1 79 aa4.57□□□□□ -1.68
HERC2-211ENST00000569335 A8MZ25 164 aa4.57□□□□□ -1.68
HERC2-211ENST00000569335 F8W1H4 67 aa4.57□□□□□ -1.68
HERC2-211ENST00000569335 APOC4P55056 127 aa4.57□□□□□ -1.68
HERC2-211ENST00000569335 CEMP1Q6PRD7 247 aaPredicted RBP4.57□□□□□ -1.68
HERC2-211ENST00000569335 LINC01561Q8N1V8 128 aa4.57□□□□□ -1.68
HERC2-211ENST00000569335 LINC01600Q96MT4 127 aa4.57□□□□□ -1.68
HERC2-211ENST00000569335 GEMIN7Q9H840 131 aaKnown RBP4.57□□□□□ -1.68
HERC2-211ENST00000569335 NDUFA12Q9UI09 145 aa4.57□□□□□ -1.68
HERC2-211ENST00000569335 TRBV20-1A0A075B6N2 111 aa4.56□□□□□ -1.68
HERC2-211ENST00000569335 TRAV26-1A0A087WT03 109 aa4.56□□□□□ -1.68
HERC2-211ENST00000569335 TRBV6-8A0A0A6YYG3 113 aa4.56□□□□□ -1.68
HERC2-211ENST00000569335 IGHV3-38A0A0C4DH36 116 aa4.56□□□□□ -1.68
HERC2-211ENST00000569335 F5H768 121 aa4.56□□□□□ -1.68
HERC2-211ENST00000569335 K7ERJ3 54 aa4.56□□□□□ -1.68
HERC2-211ENST00000569335 M0QXV9 152 aa4.56□□□□□ -1.68
HERC2-211ENST00000569335 GAGE7O76087 117 aa4.56□□□□□ -1.68
HERC2-211ENST00000569335 CFC1BP0CG36 223 aa4.56□□□□□ -1.68
HERC2-211ENST00000569335 CFC1P0CG37 223 aa4.56□□□□□ -1.68
HERC2-211ENST00000569335 GAGE12FP0CL80 117 aa4.56□□□□□ -1.68
HERC2-211ENST00000569335 GAGE12GP0CL81 117 aa4.56□□□□□ -1.68
HERC2-211ENST00000569335 GAGE12IP0CL82 117 aa4.56□□□□□ -1.68
HERC2-211ENST00000569335 MIFP14174 115 aa4.56□□□□□ -1.68
HERC2-211ENST00000569335 DGAT2L7PQ6IED9 249 aa4.56□□□□□ -1.68
HERC2-211ENST00000569335 RAB37Q96AX2 223 aa4.56□□□□□ -1.68
HERC2-211ENST00000569335 CUBNO60494 3623 aa4.55□□□□□ -1.68
HERC2-211ENST00000569335 C2CD3Q4AC94 2353 aa4.55□□□□□ -1.68
HERC2-211ENST00000569335 WNK1Q9H4A3 2382 aa4.55□□□□□ -1.68
HERC2-211ENST00000569335 TRGV4A0A0C4DH28 118 aa4.55□□□□□ -1.68
HERC2-211ENST00000569335 GAGE12JA6NER3 117 aa4.55□□□□□ -1.68
HERC2-211ENST00000569335 SMIM1B2RUZ4 78 aa4.55□□□□□ -1.68
HERC2-211ENST00000569335 K7ERU9 68 aa4.55□□□□□ -1.68
HERC2-211ENST00000569335 RBX1P62877 108 aa4.55□□□□□ -1.68
HERC2-211ENST00000569335 HERV-K104P63124 156 aa4.55□□□□□ -1.68
HERC2-211ENST00000569335 GAGE4Q13068 117 aa4.55□□□□□ -1.68
HERC2-211ENST00000569335 GAGE5Q13069 117 aa4.55□□□□□ -1.68
HERC2-211ENST00000569335 MIAQ16674 131 aa4.55□□□□□ -1.68
HERC2-211ENST00000569335 OCIAD2Q56VL3 154 aa4.55□□□□□ -1.68
HERC2-211ENST00000569335 SFTA2Q6UW10 78 aa4.55□□□□□ -1.68
HERC2-211ENST00000569335 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.55□□□□□ -1.68
HERC2-211ENST00000569335 DEFB104AQ8WTQ1 72 aa4.55□□□□□ -1.68
HERC2-211ENST00000569335 COPS9Q8WXC6 57 aa4.55□□□□□ -1.68
HERC2-211ENST00000569335 ZNF625Q96I27 306 aaPredicted RBP4.55□□□□□ -1.68
HERC2-211ENST00000569335 TMEM101Q96IK0 257 aa4.55□□□□□ -1.68
HERC2-211ENST00000569335 CDKN2A-AS1Q9UH64 79 aa4.55□□□□□ -1.68
HERC2-211ENST00000569335 PRO1854Q9UHT4 67 aa4.55□□□□□ -1.68
HERC2-211ENST00000569335 PRO0461Q9UI25 63 aa4.55□□□□□ -1.68
HERC2-211ENST00000569335 PRO0255Q9UI72 69 aa4.55□□□□□ -1.68
HERC2-211ENST00000569335 FN1P02751 2386 aaKnown RBP4.55□□□□□ -1.68
HERC2-211ENST00000569335 TEP1Q99973 2627 aaKnown RBP4.54□□□□□ -1.68
HERC2-211ENST00000569335 TRAV8-3A0A0A6YYJ7 113 aa4.54□□□□□ -1.68
HERC2-211ENST00000569335 TEX48A0A1B0GUV7 120 aa4.54□□□□□ -1.68
HERC2-211ENST00000569335 UBE2L6O14933 153 aa4.54□□□□□ -1.68
HERC2-211ENST00000569335 TSPAN13O95857 204 aa4.54□□□□□ -1.68
HERC2-211ENST00000569335 IGHV3OR16-9A0A0B4J2B5 98 aa4.53□□□□□ -1.68
HERC2-211ENST00000569335 TRBV30A0A0K0K1B3 111 aa4.53□□□□□ -1.68
HERC2-211ENST00000569335 A4D1N5 150 aa4.53□□□□□ -1.68
HERC2-211ENST00000569335 IGHV3-33P01772 117 aa4.53□□□□□ -1.68
HERC2-211ENST00000569335 COX6A2Q02221 97 aa4.53□□□□□ -1.68
HERC2-211ENST00000569335 EGFEM1PQ0D2K5 195 aa4.53□□□□□ -1.68
HERC2-211ENST00000569335 CIRBPQ14011 172 aaKnown RBP4.53□□□□□ -1.68
HERC2-211ENST00000569335 SH2D6Q7Z4S9 175 aa4.53□□□□□ -1.68
HERC2-211ENST00000569335 MUSTN1Q8IVN3 82 aa4.53□□□□□ -1.68
HERC2-211ENST00000569335 Q8NAQ8 132 aa4.53□□□□□ -1.68
HERC2-211ENST00000569335 ATP6V0E2Q8NHE4 81 aa4.53□□□□□ -1.68
HERC2-211ENST00000569335 A0A087WZ39 114 aa4.52□□□□□ -1.69
HERC2-211ENST00000569335 G3V4G9 280 aa4.52□□□□□ -1.69
HERC2-211ENST00000569335 SPINK8P0C7L1 97 aa4.52□□□□□ -1.69
HERC2-211ENST00000569335 RNASE13Q5GAN3 156 aaKnown RBP4.52□□□□□ -1.69
HERC2-211ENST00000569335 SPATA3Q8NHX4 192 aa4.52□□□□□ -1.69
HERC2-211ENST00000569335 CBY1Q9Y3M2 126 aa4.52□□□□□ -1.69
HERC2-211ENST00000569335 LOC100131303A0A0U1RQF7 123 aa4.51□□□□□ -1.69
HERC2-211ENST00000569335 H3BMG7 143 aa4.51□□□□□ -1.69
HERC2-211ENST00000569335 H3BNG1 76 aa4.51□□□□□ -1.69
HERC2-211ENST00000569335 ADAMTSL4-AS1Q5T5F5 129 aa4.51□□□□□ -1.69
HERC2-211ENST00000569335 FAM222AQ5U5X8 452 aa4.51□□□□□ -1.69
HERC2-211ENST00000569335 NAA38Q9BRA0 125 aaKnown RBP4.51□□□□□ -1.69
HERC2-211ENST00000569335 ERG28Q9UKR5 140 aa4.51□□□□□ -1.69
HERC2-211ENST00000569335 JMJD1CQ15652 2540 aa4.51□□□□□ -1.69
HERC2-211ENST00000569335 SETD2Q9BYW2 2564 aaPredicted RBP4.51□□□□□ -1.69
HERC2-211ENST00000569335 NIPBLQ6KC79 2804 aaeCLIP4.5□□□□□ -1.69
HERC2-211ENST00000569335 IGHV3-64A0A075B6Q5 118 aa4.5□□□□□ -1.69
HERC2-211ENST00000569335 TRAV13-1A0A0B4J241 112 aa4.5□□□□□ -1.69
HERC2-211ENST00000569335 IGHV4-28A0A0C4DH34 117 aa4.5□□□□□ -1.69
HERC2-211ENST00000569335 APOMO95445 188 aa4.5□□□□□ -1.69
HERC2-211ENST00000569335 ATP5G1P05496 136 aa4.5□□□□□ -1.69
HERC2-211ENST00000569335 SPART-AS1P0CW21 52 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms