RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 LGALS3P17931 250 aaKnown RBP10.17□□□□□ -0.78
COMMD4-221ENST00000567935 VSIG2Q96IQ7 327 aa10.17□□□□□ -0.78
COMMD4-221ENST00000567935 CHCHD5Q9BSY4 110 aa10.17□□□□□ -0.78
COMMD4-221ENST00000567935 ZNF815PA8K554 130 aa10.16□□□□□ -0.78
COMMD4-221ENST00000567935 J3QQQ9 107 aa10.16□□□□□ -0.78
COMMD4-221ENST00000567935 SPATA25Q9BR10 227 aa10.16□□□□□ -0.78
COMMD4-221ENST00000567935 ICOSQ9Y6W8 199 aa10.16□□□□□ -0.78
COMMD4-221ENST00000567935 A0A1B0GUV1 79 aa10.15□□□□□ -0.78
COMMD4-221ENST00000567935 RNASE13Q5GAN3 156 aaKnown RBP10.15□□□□□ -0.78
COMMD4-221ENST00000567935 LINC00469Q8N7U9 141 aa10.15□□□□□ -0.78
COMMD4-221ENST00000567935 MAPKAPK5-AS1Q8N8E1 139 aa10.15□□□□□ -0.78
COMMD4-221ENST00000567935 IGHV1-58A0A0C4DH39 117 aa10.14□□□□□ -0.79
COMMD4-221ENST00000567935 GAGE6Q13070 117 aa10.14□□□□□ -0.79
COMMD4-221ENST00000567935 C12orf74Q32Q52 190 aa10.14□□□□□ -0.79
COMMD4-221ENST00000567935 ORAOV1Q8WV07 137 aa10.14□□□□□ -0.79
COMMD4-221ENST00000567935 TTTY13Q9BZ97 58 aa10.14□□□□□ -0.79
COMMD4-221ENST00000567935 A6NDN8 102 aa10.13□□□□□ -0.79
COMMD4-221ENST00000567935 LINC00242Q5T6M2 205 aa10.13□□□□□ -0.79
COMMD4-221ENST00000567935 RETNQ9HD89 108 aa10.13□□□□□ -0.79
COMMD4-221ENST00000567935 A0A0J9YY99 117 aa10.12□□□□□ -0.79
COMMD4-221ENST00000567935 CCL25O15444 150 aa10.12□□□□□ -0.79
COMMD4-221ENST00000567935 SCGB1D4Q6XE38 83 aa10.12□□□□□ -0.79
COMMD4-221ENST00000567935 IGHV3-30-3P0DP02 117 aa10.11□□□□□ -0.79
COMMD4-221ENST00000567935 HTN3P15516 51 aa10.11□□□□□ -0.79
COMMD4-221ENST00000567935 LELP1Q5T871 98 aa10.11□□□□□ -0.79
COMMD4-221ENST00000567935 TM2D3Q9BRN9 247 aa10.11□□□□□ -0.79
COMMD4-221ENST00000567935 TM2D2Q9BX73 214 aa10.11□□□□□ -0.79
COMMD4-221ENST00000567935 KMT2AQ03164 3969 aa10.1□□□□□ -0.79
COMMD4-221ENST00000567935 TRAV13-1A0A0B4J241 112 aa10.1□□□□□ -0.79
COMMD4-221ENST00000567935 CEND1Q8N111 149 aa10.1□□□□□ -0.79
COMMD4-221ENST00000567935 SPANXB1Q9NS25 103 aaPredicted RBP10.1□□□□□ -0.79
COMMD4-221ENST00000567935 CDKN2A-AS1Q9UH64 79 aa10.1□□□□□ -0.79
COMMD4-221ENST00000567935 A0A1B0GV90 55 aa10.09□□□□□ -0.79
COMMD4-221ENST00000567935 TSPEAR-AS2P59090 65 aa10.09□□□□□ -0.79
COMMD4-221ENST00000567935 HIST1H4GQ99525 98 aa10.09□□□□□ -0.79
COMMD4-221ENST00000567935 IGLV4-60A0A075B6I1 120 aa10.08□□□□□ -0.8
COMMD4-221ENST00000567935 A0A096LPF7 62 aa10.08□□□□□ -0.8
COMMD4-221ENST00000567935 IGLV5-39A0A0G2JS06 123 aa10.08□□□□□ -0.8
COMMD4-221ENST00000567935 A0A0J9YWU9 116 aa10.08□□□□□ -0.8
COMMD4-221ENST00000567935 TMEM262E9PQX1 116 aa10.08□□□□□ -0.8
COMMD4-221ENST00000567935 GCSHP23434 173 aa10.08□□□□□ -0.8
COMMD4-221ENST00000567935 RBX1P62877 108 aa10.08□□□□□ -0.8
COMMD4-221ENST00000567935 C11orf45Q8TAV5 145 aa10.08□□□□□ -0.8
COMMD4-221ENST00000567935 TMEM238LA0A1B0GVL6 79 aa10.07□□□□□ -0.8
COMMD4-221ENST00000567935 A6NJY4 79 aa10.07□□□□□ -0.8
COMMD4-221ENST00000567935 SPINK8P0C7L1 97 aa10.06□□□□□ -0.8
COMMD4-221ENST00000567935 PTTG1IPP53801 180 aa10.06□□□□□ -0.8
COMMD4-221ENST00000567935 COX6A2Q02221 97 aa10.06□□□□□ -0.8
COMMD4-221ENST00000567935 Q6ZTC4 211 aa10.06□□□□□ -0.8
COMMD4-221ENST00000567935 LINC01561Q8N1V8 128 aa10.06□□□□□ -0.8
COMMD4-221ENST00000567935 NDUFA12Q9UI09 145 aa10.06□□□□□ -0.8
COMMD4-221ENST00000567935 IGHV3-64A0A075B6Q5 118 aa10.05□□□□□ -0.8
COMMD4-221ENST00000567935 TMEM238C9JI98 176 aa10.05□□□□□ -0.8
COMMD4-221ENST00000567935 SRSF9Q13242 221 aaKnown RBP eCLIP10.05□□□□□ -0.8
COMMD4-221ENST00000567935 SS18Q15532 418 aa10.05□□□□□ -0.8
COMMD4-221ENST00000567935 COX11Q9Y6N1 276 aa10.05□□□□□ -0.8
COMMD4-221ENST00000567935 TRAV8-3A0A0A6YYJ7 113 aa10.04□□□□□ -0.8
COMMD4-221ENST00000567935 LINC00959A0A1B0GUT2 108 aa10.04□□□□□ -0.8
COMMD4-221ENST00000567935 SMIM1B2RUZ4 78 aa10.04□□□□□ -0.8
COMMD4-221ENST00000567935 NDUFA1O15239 70 aa10.04□□□□□ -0.8
COMMD4-221ENST00000567935 TIMM17BO60830 172 aa10.04□□□□□ -0.8
COMMD4-221ENST00000567935 Q6ZVH6 145 aa10.04□□□□□ -0.8
COMMD4-221ENST00000567935 DEFB131BA0A096LNP1 70 aa10.03□□□□□ -0.8
COMMD4-221ENST00000567935 TAX1BP3O14907 124 aa10.03□□□□□ -0.8
COMMD4-221ENST00000567935 SMIM13P0DJ93 91 aa10.03□□□□□ -0.8
COMMD4-221ENST00000567935 FXYD2P54710 66 aa10.03□□□□□ -0.8
COMMD4-221ENST00000567935 SFTA2Q6UW10 78 aa10.03□□□□□ -0.8
COMMD4-221ENST00000567935 LINC00476Q8WZB0 136 aa10.03□□□□□ -0.8
COMMD4-221ENST00000567935 A0A087WZ39 114 aa10.02□□□□□ -0.81
COMMD4-221ENST00000567935 TRAV10A0A0B4J240 114 aa10.02□□□□□ -0.81
COMMD4-221ENST00000567935 IGHV3OR16-9A0A0B4J2B5 98 aa10.02□□□□□ -0.81
COMMD4-221ENST00000567935 A0A0J9YXY3 114 aa10.02□□□□□ -0.81
COMMD4-221ENST00000567935 HERV-K104P63124 156 aa10.02□□□□□ -0.81
COMMD4-221ENST00000567935 LYPD5Q6UWN5 251 aa10.02□□□□□ -0.81
COMMD4-221ENST00000567935 C10orf126Q8N4M7 172 aa10.02□□□□□ -0.81
COMMD4-221ENST00000567935 C15orf53Q8NAA6 179 aa10.01□□□□□ -0.81
COMMD4-221ENST00000567935 A0A1B0GWB2 263 aa10□□□□□ -0.81
COMMD4-221ENST00000567935 NANOS2P60321 138 aaKnown RBP10□□□□□ -0.81
COMMD4-221ENST00000567935 CIRBPQ14011 172 aaKnown RBP10□□□□□ -0.81
COMMD4-221ENST00000567935 SPANXDQ9BXN6 97 aa10□□□□□ -0.81
COMMD4-221ENST00000567935 SPANXCQ9NY87 97 aa10□□□□□ -0.81
COMMD4-221ENST00000567935 IGKV3OR2-268A0A0C4DH90 116 aa9.99□□□□□ -0.81
COMMD4-221ENST00000567935 IGHV3-30P01768 117 aa9.99□□□□□ -0.81
COMMD4-221ENST00000567935 ANGP03950 147 aaKnown RBP9.99□□□□□ -0.81
COMMD4-221ENST00000567935 IGHV3-30-5P0DP03 117 aa9.99□□□□□ -0.81
COMMD4-221ENST00000567935 C9orf118A6NHY6 69 aa9.98□□□□□ -0.81
COMMD4-221ENST00000567935 LY6G6CO95867 125 aa9.98□□□□□ -0.81
COMMD4-221ENST00000567935 RPL24P83731 157 aaKnown RBP9.98□□□□□ -0.81
COMMD4-221ENST00000567935 REG3AQ06141 175 aa9.98□□□□□ -0.81
COMMD4-221ENST00000567935 CD164L2Q6UWJ8 174 aa9.98□□□□□ -0.81
COMMD4-221ENST00000567935 COPS9Q8WXC6 57 aa9.98□□□□□ -0.81
COMMD4-221ENST00000567935 NHP2Q9NX24 153 aaKnown RBP9.98□□□□□ -0.81
COMMD4-221ENST00000567935 IFITM1P13164 125 aa9.97□□□□□ -0.81
COMMD4-221ENST00000567935 LINC00269Q8N2A0 174 aa9.97□□□□□ -0.81
COMMD4-221ENST00000567935 COX7B2Q8TF08 81 aa9.97□□□□□ -0.81
COMMD4-221ENST00000567935 Q9H8V8 135 aa9.97□□□□□ -0.81
COMMD4-221ENST00000567935 PRR34Q9NV39 138 aa9.97□□□□□ -0.81
COMMD4-221ENST00000567935 DYNC1H1Q14204 4646 aaKnown RBP9.96□□□□□ -0.81
COMMD4-221ENST00000567935 ZNF625Q96I27 306 aaPredicted RBP9.96□□□□□ -0.82
COMMD4-221ENST00000567935 LITAFQ99732 161 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 207.2 ms