RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 WIPF1O43516 503 aa9.41□□□□□ -0.9
LINC00563-201ENST00000566370 SS18Q15532 418 aa9.41□□□□□ -0.9
LINC00563-201ENST00000566370 DEFB135Q30KP9 77 aa9.41□□□□□ -0.9
LINC00563-201ENST00000566370 SH2D6Q7Z4S9 175 aa9.41□□□□□ -0.9
LINC00563-201ENST00000566370 PPDPFQ9H3Y8 114 aa9.41□□□□□ -0.9
LINC00563-201ENST00000566370 TRBV30A0A0K0K1B3 111 aa9.4□□□□□ -0.9
LINC00563-201ENST00000566370 ATP5G1P05496 136 aa9.4□□□□□ -0.9
LINC00563-201ENST00000566370 ATXN8Q156A1 80 aa9.4□□□□□ -0.9
LINC00563-201ENST00000566370 A0A1B0GUV1 79 aa9.39□□□□□ -0.91
LINC00563-201ENST00000566370 A8MZ25 164 aa9.39□□□□□ -0.91
LINC00563-201ENST00000566370 TMEM262E9PQX1 116 aa9.39□□□□□ -0.91
LINC00563-201ENST00000566370 H7C2G1 150 aa9.39□□□□□ -0.91
LINC00563-201ENST00000566370 SPART-AS1P0CW21 52 aa9.39□□□□□ -0.91
LINC00563-201ENST00000566370 COX7B2Q8TF08 81 aa9.39□□□□□ -0.91
LINC00563-201ENST00000566370 GCN1Q92616 2671 aaKnown RBP9.39□□□□□ -0.91
LINC00563-201ENST00000566370 TRAV26-1A0A087WT03 109 aa9.39□□□□□ -0.91
LINC00563-201ENST00000566370 IGHV4-28A0A0C4DH34 117 aa9.39□□□□□ -0.91
LINC00563-201ENST00000566370 F5H768 121 aa9.39□□□□□ -0.91
LINC00563-201ENST00000566370 WFDC2Q14508 124 aa9.39□□□□□ -0.91
LINC00563-201ENST00000566370 SETD2Q9BYW2 2564 aaPredicted RBP9.38□□□□□ -0.91
LINC00563-201ENST00000566370 IGKV3OR2-268A0A0C4DH90 116 aa9.38□□□□□ -0.91
LINC00563-201ENST00000566370 TCL1BO95988 128 aa9.38□□□□□ -0.91
LINC00563-201ENST00000566370 ADAMTSL4-AS1Q5T5F5 129 aa9.38□□□□□ -0.91
LINC00563-201ENST00000566370 PRO0461Q9UI25 63 aa9.38□□□□□ -0.91
LINC00563-201ENST00000566370 SETXQ7Z333 2677 aaKnown RBP9.37□□□□□ -0.91
LINC00563-201ENST00000566370 ETDBQ3ZM63 59 aa9.37□□□□□ -0.91
LINC00563-201ENST00000566370 LINC01561Q8N1V8 128 aa9.37□□□□□ -0.91
LINC00563-201ENST00000566370 LINC00308Q8TCZ7 52 aa9.37□□□□□ -0.91
LINC00563-201ENST00000566370 ZNF625Q96I27 306 aaPredicted RBP9.37□□□□□ -0.91
LINC00563-201ENST00000566370 ICOSQ9Y6W8 199 aa9.37□□□□□ -0.91
LINC00563-201ENST00000566370 M0QXV9 152 aa9.36□□□□□ -0.91
LINC00563-201ENST00000566370 NPC2P61916 151 aa9.36□□□□□ -0.91
LINC00563-201ENST00000566370 MRPL23Q16540 153 aaKnown RBP9.36□□□□□ -0.91
LINC00563-201ENST00000566370 TOMM7Q9P0U1 55 aa9.36□□□□□ -0.91
LINC00563-201ENST00000566370 HECTD1Q9ULT8 2610 aa9.36□□□□□ -0.91
LINC00563-201ENST00000566370 NF1P21359 2839 aa9.36□□□□□ -0.91
LINC00563-201ENST00000566370 IGLV4-60A0A075B6I1 120 aa9.35□□□□□ -0.91
LINC00563-201ENST00000566370 A0A087WZ39 114 aa9.35□□□□□ -0.91
LINC00563-201ENST00000566370 LINC00959A0A1B0GUT2 108 aa9.35□□□□□ -0.91
LINC00563-201ENST00000566370 RPL13AP40429 203 aaKnown RBP9.35□□□□□ -0.91
LINC00563-201ENST00000566370 ANK3Q12955 4377 aaKnown RBP9.35□□□□□ -0.91
LINC00563-201ENST00000566370 IGHV4-30-4P0DP06 118 aa9.34□□□□□ -0.91
LINC00563-201ENST00000566370 IGHV3OR16-9A0A0B4J2B5 98 aa9.33□□□□□ -0.92
LINC00563-201ENST00000566370 TEN1Q86WV5 123 aa9.33□□□□□ -0.92
LINC00563-201ENST00000566370 Q8NAQ8 132 aa9.33□□□□□ -0.92
LINC00563-201ENST00000566370 PPDPFLQ8WWR9 84 aa9.33□□□□□ -0.92
LINC00563-201ENST00000566370 JMJD1CQ15652 2540 aa9.33□□□□□ -0.92
LINC00563-201ENST00000566370 SLC25A20O43772 301 aa9.32□□□□□ -0.92
LINC00563-201ENST00000566370 C2CD3Q4AC94 2353 aa9.32□□□□□ -0.92
LINC00563-201ENST00000566370 TRAV13-2A0A0B4J235 113 aa9.31□□□□□ -0.92
LINC00563-201ENST00000566370 IBA57-AS1B1ANH7 110 aa9.31□□□□□ -0.92
LINC00563-201ENST00000566370 C9JAW5 83 aa9.31□□□□□ -0.92
LINC00563-201ENST00000566370 TRIAP1O43715 76 aa9.31□□□□□ -0.92
LINC00563-201ENST00000566370 LINC01620Q4KN68 170 aa9.31□□□□□ -0.92
LINC00563-201ENST00000566370 C6orf226Q5I0X4 101 aa9.31□□□□□ -0.92
LINC00563-201ENST00000566370 DAND5Q8N907 189 aa9.31□□□□□ -0.92
LINC00563-201ENST00000566370 ZNF469Q96JG9 3925 aaPredicted RBP9.31□□□□□ -0.92
LINC00563-201ENST00000566370 A0A0U1RRA0 63 aa9.31□□□□□ -0.92
LINC00563-201ENST00000566370 EIF4EBP3O60516 100 aaPredicted RBP9.31□□□□□ -0.92
LINC00563-201ENST00000566370 LINC00158P58513 81 aa9.31□□□□□ -0.92
LINC00563-201ENST00000566370 SHISA2Q6UWI4 295 aa9.31□□□□□ -0.92
LINC00563-201ENST00000566370 MTURNQ8N3F0 131 aa9.31□□□□□ -0.92
LINC00563-201ENST00000566370 C3orf56Q8N813 242 aa9.31□□□□□ -0.92
LINC00563-201ENST00000566370 SPATA3Q8NHX4 192 aa9.31□□□□□ -0.92
LINC00563-201ENST00000566370 AKAP9Q99996 3911 aa9.3□□□□□ -0.92
LINC00563-201ENST00000566370 NOTCH3Q9UM47 2321 aa9.3□□□□□ -0.92
LINC00563-201ENST00000566370 NSD1Q96L73 2696 aaPredicted RBP9.3□□□□□ -0.92
LINC00563-201ENST00000566370 DEFB4AO15263 64 aa9.3□□□□□ -0.92
LINC00563-201ENST00000566370 CRPP02741 224 aa9.3□□□□□ -0.92
LINC00563-201ENST00000566370 CXCL5P42830 114 aa9.3□□□□□ -0.92
LINC00563-201ENST00000566370 FOXI1Q12951 378 aa9.3□□□□□ -0.92
LINC00563-201ENST00000566370 Q8IZM0 81 aa9.3□□□□□ -0.92
LINC00563-201ENST00000566370 NBPF19A0A087WUL8 3843 aa9.29□□□□□ -0.92
LINC00563-201ENST00000566370 A0A096LPF7 62 aa9.29□□□□□ -0.92
LINC00563-201ENST00000566370 TRBV10-2A0A0K0K1G8 114 aa9.29□□□□□ -0.92
LINC00563-201ENST00000566370 HTN3P15516 51 aa9.29□□□□□ -0.92
LINC00563-201ENST00000566370 XCL1P47992 114 aa9.29□□□□□ -0.92
LINC00563-201ENST00000566370 PCP4P48539 62 aa9.29□□□□□ -0.92
LINC00563-201ENST00000566370 LELP1Q5T871 98 aa9.29□□□□□ -0.92
LINC00563-201ENST00000566370 CFAP161Q6P656 301 aa9.29□□□□□ -0.92
LINC00563-201ENST00000566370 C5orf38Q86SI9 138 aa9.29□□□□□ -0.92
LINC00563-201ENST00000566370 H3BT86 120 aa9.28□□□□□ -0.92
LINC00563-201ENST00000566370 COX7A2LO14548 114 aa9.28□□□□□ -0.92
LINC00563-201ENST00000566370 ANGP03950 147 aaKnown RBP9.28□□□□□ -0.92
LINC00563-201ENST00000566370 CD164L2Q6UWJ8 174 aa9.28□□□□□ -0.92
LINC00563-201ENST00000566370 ANKRD29Q8N6D5 301 aa9.28□□□□□ -0.92
LINC00563-201ENST00000566370 NOTCH2Q04721 2471 aa9.27□□□□□ -0.92
LINC00563-201ENST00000566370 FN1P02751 2386 aaKnown RBP9.27□□□□□ -0.93
LINC00563-201ENST00000566370 MALP21145 153 aa9.27□□□□□ -0.93
LINC00563-201ENST00000566370 SMCPP49901 116 aaPredicted RBP9.27□□□□□ -0.93
LINC00563-201ENST00000566370 CKS1BP61024 79 aa9.27□□□□□ -0.93
LINC00563-201ENST00000566370 MIR7-3HGQ8N6C7 128 aa9.27□□□□□ -0.93
LINC00563-201ENST00000566370 LINC01600Q96MT4 127 aa9.26□□□□□ -0.93
LINC00563-201ENST00000566370 CELA1Q9UNI1 258 aa9.26□□□□□ -0.93
LINC00563-201ENST00000566370 GAGE12HA6NDE8 117 aa9.25□□□□□ -0.93
LINC00563-201ENST00000566370 H3BNG1 76 aa9.25□□□□□ -0.93
LINC00563-201ENST00000566370 LST1O00453 97 aa9.25□□□□□ -0.93
LINC00563-201ENST00000566370 REG3AQ06141 175 aa9.25□□□□□ -0.93
LINC00563-201ENST00000566370 C2orf82Q6UX34 121 aa9.25□□□□□ -0.93
LINC00563-201ENST00000566370 LINC00269Q8N2A0 174 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms