RNA–Protein interactions for RNA: ENST00000565334.5

CDH5-205, Transcript of cadherin 5, humanhuman

TSL 5

Gene CDH5, Length 2,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-205ENST00000565334 ITPR3Q14573 2671 aa13.21□□□□□ -0.29
CDH5-205ENST00000565334 UBE2L6O14933 153 aa13.21□□□□□ -0.3
CDH5-205ENST00000565334 EIF4EBP3O60516 100 aaPredicted RBP13.2□□□□□ -0.3
CDH5-205ENST00000565334 LINC00482Q8N8I6 264 aa13.2□□□□□ -0.3
CDH5-205ENST00000565334 TRGV4A0A0C4DH28 118 aa13.19□□□□□ -0.3
CDH5-205ENST00000565334 CIRBPQ14011 172 aaKnown RBP13.19□□□□□ -0.3
CDH5-205ENST00000565334 DEFB121Q5J5C9 76 aa13.19□□□□□ -0.3
CDH5-205ENST00000565334 PRSS2P07478 247 aa13.18□□□□□ -0.3
CDH5-205ENST00000565334 COX6A2Q02221 97 aa13.18□□□□□ -0.3
CDH5-205ENST00000565334 ADAMTSL4-AS1Q5T5F5 129 aa13.18□□□□□ -0.3
CDH5-205ENST00000565334 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.18□□□□□ -0.3
CDH5-205ENST00000565334 CENPEQ02224 2701 aa13.17□□□□□ -0.3
CDH5-205ENST00000565334 COPS9Q8WXC6 57 aa13.17□□□□□ -0.3
CDH5-205ENST00000565334 A8MZ25 164 aa13.16□□□□□ -0.3
CDH5-205ENST00000565334 KRTAP10-3P60369 221 aa13.16□□□□□ -0.3
CDH5-205ENST00000565334 KIR2DL5BQ8NHK3 375 aa13.16□□□□□ -0.3
CDH5-205ENST00000565334 SMIM1B2RUZ4 78 aa13.16□□□□□ -0.3
CDH5-205ENST00000565334 LY6G6DO95868 133 aa13.16□□□□□ -0.3
CDH5-205ENST00000565334 FHL2Q14192 279 aa13.16□□□□□ -0.3
CDH5-205ENST00000565334 Q1RN00 199 aa13.16□□□□□ -0.3
CDH5-205ENST00000565334 ZNF469Q96JG9 3925 aaPredicted RBP13.15□□□□□ -0.3
CDH5-205ENST00000565334 ACYP1P07311 99 aa13.15□□□□□ -0.3
CDH5-205ENST00000565334 AKAP9Q99996 3911 aa13.15□□□□□ -0.3
CDH5-205ENST00000565334 TRAV13-1A0A0B4J241 112 aa13.15□□□□□ -0.3
CDH5-205ENST00000565334 SMR3AQ99954 134 aa13.15□□□□□ -0.3
CDH5-205ENST00000565334 ATP5G1P05496 136 aa13.14□□□□□ -0.31
CDH5-205ENST00000565334 LINC00612Q8N6U2 182 aa13.14□□□□□ -0.31
CDH5-205ENST00000565334 EPG5Q9HCE0 2579 aa13.13□□□□□ -0.31
CDH5-205ENST00000565334 TEX49A0A1B0GTD5 131 aa13.13□□□□□ -0.31
CDH5-205ENST00000565334 SMIM9A6NGZ8 99 aa13.13□□□□□ -0.31
CDH5-205ENST00000565334 Q9H8V8 135 aa13.13□□□□□ -0.31
CDH5-205ENST00000565334 PDZD2O15018 2839 aa13.12□□□□□ -0.31
CDH5-205ENST00000565334 PPDPFQ9H3Y8 114 aa13.12□□□□□ -0.31
CDH5-205ENST00000565334 LOC100131303A0A0U1RQF7 123 aa13.12□□□□□ -0.31
CDH5-205ENST00000565334 F5H768 121 aa13.12□□□□□ -0.31
CDH5-205ENST00000565334 C9orf66Q5T8R8 295 aa13.12□□□□□ -0.31
CDH5-205ENST00000565334 C2orf82Q6UX34 121 aa13.12□□□□□ -0.31
CDH5-205ENST00000565334 TRBV6-8A0A0A6YYG3 113 aa13.11□□□□□ -0.31
CDH5-205ENST00000565334 H7C2G1 150 aa13.11□□□□□ -0.31
CDH5-205ENST00000565334 COX6CP09669 75 aa13.11□□□□□ -0.31
CDH5-205ENST00000565334 MYO9AB2RTY4 2548 aa13.1□□□□□ -0.31
CDH5-205ENST00000565334 ANK3Q12955 4377 aaKnown RBP13.1□□□□□ -0.31
CDH5-205ENST00000565334 ICOSQ9Y6W8 199 aa13.1□□□□□ -0.31
CDH5-205ENST00000565334 ZNF625Q96I27 306 aaPredicted RBP13.09□□□□□ -0.31
CDH5-205ENST00000565334 C5orf47Q569G3 176 aa13.09□□□□□ -0.31
CDH5-205ENST00000565334 TRIAP1O43715 76 aa13.08□□□□□ -0.32
CDH5-205ENST00000565334 LINC00308Q8TCZ7 52 aa13.08□□□□□ -0.32
CDH5-205ENST00000565334 FLNAP21333 2647 aaKnown RBP13.08□□□□□ -0.32
CDH5-205ENST00000565334 A0A1B0GX51 115 aa13.07□□□□□ -0.32
CDH5-205ENST00000565334 PRIMA1Q86XR5 153 aa13.07□□□□□ -0.32
CDH5-205ENST00000565334 NBPF19A0A087WUL8 3843 aa13.07□□□□□ -0.32
CDH5-205ENST00000565334 NPC2P61916 151 aa13.06□□□□□ -0.32
CDH5-205ENST00000565334 SONP18583 2426 aaKnown RBP13.06□□□□□ -0.32
CDH5-205ENST00000565334 UQCRQO14949 82 aa13.06□□□□□ -0.32
CDH5-205ENST00000565334 X6R8D5 127 aa13.06□□□□□ -0.32
CDH5-205ENST00000565334 C3orf22Q8N5N4 141 aa13.05□□□□□ -0.32
CDH5-205ENST00000565334 CHCHD5Q9BSY4 110 aa13.05□□□□□ -0.32
CDH5-205ENST00000565334 DEFB130BP0DP73 79 aa13.04□□□□□ -0.32
CDH5-205ENST00000565334 DEFB130AP0DP74 79 aa13.04□□□□□ -0.32
CDH5-205ENST00000565334 LYRM9A8MSI8 78 aa13.04□□□□□ -0.32
CDH5-205ENST00000565334 LST1O00453 97 aa13.03□□□□□ -0.32
CDH5-205ENST00000565334 DAND5Q8N907 189 aa13.03□□□□□ -0.32
CDH5-205ENST00000565334 LINC00526Q96FQ7 95 aa13.03□□□□□ -0.32
CDH5-205ENST00000565334 TLN2Q9Y4G6 2542 aa13.02□□□□□ -0.32
CDH5-205ENST00000565334 TENM4Q6N022 2769 aa13.02□□□□□ -0.33
CDH5-205ENST00000565334 INAFM1C9JVW0 142 aa13.02□□□□□ -0.33
CDH5-205ENST00000565334 J3KT08 172 aa13.02□□□□□ -0.33
CDH5-205ENST00000565334 RPS28P62857 69 aaKnown RBP13.02□□□□□ -0.33
CDH5-205ENST00000565334 COX7B2Q8TF08 81 aa13.02□□□□□ -0.33
CDH5-205ENST00000565334 PRO0255Q9UI72 69 aa13.02□□□□□ -0.33
CDH5-205ENST00000565334 CXCL5P42830 114 aa13.01□□□□□ -0.33
CDH5-205ENST00000565334 C9orf153Q5TBE3 101 aa13.01□□□□□ -0.33
CDH5-205ENST00000565334 IGLV4-60A0A075B6I1 120 aa13.01□□□□□ -0.33
CDH5-205ENST00000565334 APOC4P55056 127 aa13.01□□□□□ -0.33
CDH5-205ENST00000565334 LINC00643Q86TS7 51 aa13.01□□□□□ -0.33
CDH5-205ENST00000565334 GYPEP15421 78 aa13□□□□□ -0.33
CDH5-205ENST00000565334 CHD6Q8TD26 2715 aa13□□□□□ -0.33
CDH5-205ENST00000565334 IGHV3OR16-9A0A0B4J2B5 98 aa12.99□□□□□ -0.33
CDH5-205ENST00000565334 FAM236AA0A1B0GUQ0 79 aa12.99□□□□□ -0.33
CDH5-205ENST00000565334 A0A1B0GUV1 79 aa12.99□□□□□ -0.33
CDH5-205ENST00000565334 FAM236BA0A1B0GV22 79 aa12.99□□□□□ -0.33
CDH5-205ENST00000565334 WIPF1O43516 503 aa12.99□□□□□ -0.33
CDH5-205ENST00000565334 CCDC168Q8NDH2 2452 aa12.99□□□□□ -0.33
CDH5-205ENST00000565334 A0A087WZ39 114 aa12.98□□□□□ -0.33
CDH5-205ENST00000565334 KMT2BQ9UMN6 2715 aaPredicted RBP12.98□□□□□ -0.33
CDH5-205ENST00000565334 SOSTDC1Q6X4U4 206 aa12.97□□□□□ -0.33
CDH5-205ENST00000565334 SDIM1Q6ZPB5 146 aa12.97□□□□□ -0.33
CDH5-205ENST00000565334 WNK1Q9H4A3 2382 aa12.97□□□□□ -0.33
CDH5-205ENST00000565334 FAM222AQ5U5X8 452 aa12.96□□□□□ -0.33
CDH5-205ENST00000565334 A0A0U1RRA0 63 aa12.95□□□□□ -0.34
CDH5-205ENST00000565334 LINC00959A0A1B0GUT2 108 aa12.95□□□□□ -0.34
CDH5-205ENST00000565334 LINC01561Q8N1V8 128 aa12.95□□□□□ -0.34
CDH5-205ENST00000565334 IGKV3OR2-268A0A0C4DH90 116 aa12.94□□□□□ -0.34
CDH5-205ENST00000565334 COX7A2LO14548 114 aa12.94□□□□□ -0.34
CDH5-205ENST00000565334 PAX4O43316 350 aa12.94□□□□□ -0.34
CDH5-205ENST00000565334 SS18Q15532 418 aa12.94□□□□□ -0.34
CDH5-205ENST00000565334 IBA57-AS1B1ANH7 110 aa12.93□□□□□ -0.34
CDH5-205ENST00000565334 OR13C6PQ8NH95 151 aa12.93□□□□□ -0.34
CDH5-205ENST00000565334 TOMM7Q9P0U1 55 aa12.93□□□□□ -0.34
CDH5-205ENST00000565334 TRAV13-2A0A0B4J235 113 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms