RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 GAGE12JA6NER3 117 aa10.83□□□□□ -0.68
HERC2-207ENST00000564734 SMIM1B2RUZ4 78 aa10.83□□□□□ -0.68
HERC2-207ENST00000564734 IGLV1-51P01701 117 aa10.83□□□□□ -0.68
HERC2-207ENST00000564734 GAGE4Q13068 117 aa10.83□□□□□ -0.68
HERC2-207ENST00000564734 GAGE5Q13069 117 aa10.83□□□□□ -0.68
HERC2-207ENST00000564734 CUBNO60494 3623 aa10.83□□□□□ -0.68
HERC2-207ENST00000564734 ANK3Q12955 4377 aaKnown RBP10.83□□□□□ -0.68
HERC2-207ENST00000564734 CSNK1G2-AS1Q8NCQ2 148 aa10.82□□□□□ -0.68
HERC2-207ENST00000564734 WFDC10AQ9H1F0 79 aa10.82□□□□□ -0.68
HERC2-207ENST00000564734 F5H768 121 aa10.82□□□□□ -0.68
HERC2-207ENST00000564734 DAND5Q8N907 189 aa10.82□□□□□ -0.68
HERC2-207ENST00000564734 C16orf74Q96GX8 76 aa10.82□□□□□ -0.68
HERC2-207ENST00000564734 OVOL2Q9BRP0 275 aa10.81□□□□□ -0.68
HERC2-207ENST00000564734 Q9H8V8 135 aa10.81□□□□□ -0.68
HERC2-207ENST00000564734 TRBV10-2A0A0K0K1G8 114 aa10.81□□□□□ -0.68
HERC2-207ENST00000564734 TRAV13-1A0A0B4J241 112 aa10.8□□□□□ -0.68
HERC2-207ENST00000564734 LINC00308Q8TCZ7 52 aa10.8□□□□□ -0.68
HERC2-207ENST00000564734 ZNF625Q96I27 306 aaPredicted RBP10.8□□□□□ -0.68
HERC2-207ENST00000564734 XGP55808 180 aa10.8□□□□□ -0.68
HERC2-207ENST00000564734 CIRBPQ14011 172 aaKnown RBP10.79□□□□□ -0.68
HERC2-207ENST00000564734 MT-ATP8P03928 68 aa10.79□□□□□ -0.68
HERC2-207ENST00000564734 RPL35AP18077 110 aaKnown RBP10.79□□□□□ -0.68
HERC2-207ENST00000564734 TRBV6-4A0A1B0GX49 114 aa10.78□□□□□ -0.68
HERC2-207ENST00000564734 GAGE7O76087 117 aa10.78□□□□□ -0.68
HERC2-207ENST00000564734 GAGE12FP0CL80 117 aa10.78□□□□□ -0.68
HERC2-207ENST00000564734 GAGE12GP0CL81 117 aa10.78□□□□□ -0.68
HERC2-207ENST00000564734 GAGE12IP0CL82 117 aa10.78□□□□□ -0.68
HERC2-207ENST00000564734 NOTCH3Q9UM47 2321 aa10.78□□□□□ -0.68
HERC2-207ENST00000564734 LOC100131303A0A0U1RQF7 123 aa10.78□□□□□ -0.68
HERC2-207ENST00000564734 RPL13AP40429 203 aaKnown RBP10.78□□□□□ -0.68
HERC2-207ENST00000564734 TMEM243Q9BU79 118 aa10.78□□□□□ -0.68
HERC2-207ENST00000564734 NTN5Q8WTR8 489 aaPredicted RBP10.78□□□□□ -0.68
HERC2-207ENST00000564734 H7C423 109 aa10.77□□□□□ -0.69
HERC2-207ENST00000564734 SOSTDC1Q6X4U4 206 aa10.77□□□□□ -0.69
HERC2-207ENST00000564734 COX6CP09669 75 aa10.77□□□□□ -0.69
HERC2-207ENST00000564734 TRGV2A0A075B6R0 118 aa10.76□□□□□ -0.69
HERC2-207ENST00000564734 LST1O00453 97 aa10.76□□□□□ -0.69
HERC2-207ENST00000564734 CFAP161Q6P656 301 aa10.76□□□□□ -0.69
HERC2-207ENST00000564734 CLEC2BQ92478 149 aa10.76□□□□□ -0.69
HERC2-207ENST00000564734 TMEM262E9PQX1 116 aa10.75□□□□□ -0.69
HERC2-207ENST00000564734 FHL2Q14192 279 aa10.75□□□□□ -0.69
HERC2-207ENST00000564734 COL6A5A8TX70 2615 aa10.74□□□□□ -0.69
HERC2-207ENST00000564734 UBE2L6O14933 153 aa10.74□□□□□ -0.69
HERC2-207ENST00000564734 PPDPFQ9H3Y8 114 aa10.74□□□□□ -0.69
HERC2-207ENST00000564734 CKS1BP61024 79 aa10.74□□□□□ -0.69
HERC2-207ENST00000564734 HERV-K104P63124 156 aa10.74□□□□□ -0.69
HERC2-207ENST00000564734 H3BT86 120 aa10.73□□□□□ -0.69
HERC2-207ENST00000564734 HILS1P60008 231 aa10.73□□□□□ -0.69
HERC2-207ENST00000564734 TEX49A0A1B0GTD5 131 aa10.73□□□□□ -0.69
HERC2-207ENST00000564734 PRIMA1Q86XR5 153 aa10.73□□□□□ -0.69
HERC2-207ENST00000564734 C2orf82Q6UX34 121 aa10.73□□□□□ -0.69
HERC2-207ENST00000564734 A0A0U1RRA0 63 aa10.72□□□□□ -0.69
HERC2-207ENST00000564734 TRGV4A0A0C4DH28 118 aa10.72□□□□□ -0.69
HERC2-207ENST00000564734 A0A1B0GV72 72 aa10.72□□□□□ -0.69
HERC2-207ENST00000564734 SHISA2Q6UWI4 295 aa10.72□□□□□ -0.69
HERC2-207ENST00000564734 CRLF1O75462 422 aa10.71□□□□□ -0.69
HERC2-207ENST00000564734 COPS9Q8WXC6 57 aa10.71□□□□□ -0.69
HERC2-207ENST00000564734 TRAV26-1A0A087WT03 109 aa10.71□□□□□ -0.69
HERC2-207ENST00000564734 STAB1Q9NY15 2570 aa10.71□□□□□ -0.7
HERC2-207ENST00000564734 UBE2WQ96B02 151 aa10.71□□□□□ -0.7
HERC2-207ENST00000564734 TRBV6-8A0A0A6YYG3 113 aa10.7□□□□□ -0.7
HERC2-207ENST00000564734 KRTAP10-3P60369 221 aa10.7□□□□□ -0.7
HERC2-207ENST00000564734 MEIG1Q5JSS6 88 aa10.7□□□□□ -0.7
HERC2-207ENST00000564734 IGLV4-60A0A075B6I1 120 aa10.7□□□□□ -0.7
HERC2-207ENST00000564734 GAGE6Q13070 117 aa10.7□□□□□ -0.7
HERC2-207ENST00000564734 DEFB121Q5J5C9 76 aa10.69□□□□□ -0.7
HERC2-207ENST00000564734 LINC00612Q8N6U2 182 aa10.69□□□□□ -0.7
HERC2-207ENST00000564734 CITED1Q99966 193 aa10.69□□□□□ -0.7
HERC2-207ENST00000564734 COX7A2LO14548 114 aa10.68□□□□□ -0.7
HERC2-207ENST00000564734 COX7B2Q8TF08 81 aa10.68□□□□□ -0.7
HERC2-207ENST00000564734 IGHV3OR16-9A0A0B4J2B5 98 aa10.67□□□□□ -0.7
HERC2-207ENST00000564734 KIR2DL5BQ8NHK3 375 aa10.67□□□□□ -0.7
HERC2-207ENST00000564734 TRAV8-4A0A0B4J246 113 aa10.66□□□□□ -0.7
HERC2-207ENST00000564734 TENM1Q9UKZ4 2725 aa10.65□□□□□ -0.7
HERC2-207ENST00000564734 LINC00482Q8N8I6 264 aa10.65□□□□□ -0.7
HERC2-207ENST00000564734 CHCHD5Q9BSY4 110 aa10.64□□□□□ -0.71
HERC2-207ENST00000564734 A0A087WZ39 114 aa10.63□□□□□ -0.71
HERC2-207ENST00000564734 X6R8D5 127 aa10.63□□□□□ -0.71
HERC2-207ENST00000564734 IGKV3OR2-268A0A0C4DH90 116 aa10.62□□□□□ -0.71
HERC2-207ENST00000564734 MIR7-3HGQ8N6C7 128 aa10.62□□□□□ -0.71
HERC2-207ENST00000564734 DEFB130BP0DP73 79 aa10.62□□□□□ -0.71
HERC2-207ENST00000564734 DEFB130AP0DP74 79 aa10.62□□□□□ -0.71
HERC2-207ENST00000564734 FAM222AQ5U5X8 452 aa10.62□□□□□ -0.71
HERC2-207ENST00000564734 IGKV2-28A0A075B6P5 120 aa10.61□□□□□ -0.71
HERC2-207ENST00000564734 LINC00959A0A1B0GUT2 108 aa10.61□□□□□ -0.71
HERC2-207ENST00000564734 IGKV2D-28P01615 120 aa10.61□□□□□ -0.71
HERC2-207ENST00000564734 PF4P02776 101 aa10.61□□□□□ -0.71
HERC2-207ENST00000564734 TRACP01848 142 aa10.61□□□□□ -0.71
HERC2-207ENST00000564734 TOMM7Q9P0U1 55 aa10.61□□□□□ -0.71
HERC2-207ENST00000564734 FAM240AA0A1B0GVK7 77 aa10.6□□□□□ -0.71
HERC2-207ENST00000564734 TRAV13-2A0A0B4J235 113 aa10.6□□□□□ -0.71
HERC2-207ENST00000564734 RPL28P46779 137 aaKnown RBP10.6□□□□□ -0.71
HERC2-207ENST00000564734 LINC00337Q8N6G1 96 aa10.6□□□□□ -0.71
HERC2-207ENST00000564734 FAM218AQ96MZ4 157 aa10.6□□□□□ -0.71
HERC2-207ENST00000564734 GYPEP15421 78 aa10.59□□□□□ -0.71
HERC2-207ENST00000564734 IBA57-AS1B1ANH7 110 aa10.59□□□□□ -0.71
HERC2-207ENST00000564734 C5orf38Q86SI9 138 aa10.59□□□□□ -0.71
HERC2-207ENST00000564734 C22orf24Q9Y442 160 aa10.59□□□□□ -0.71
HERC2-207ENST00000564734 SNCGO76070 127 aa10.58□□□□□ -0.72
HERC2-207ENST00000564734 A0A1B0GUV1 79 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms