RNA–Protein interactions for RNA: ENST00000563455.1

SMPD3-205, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-205ENST00000563455 MPV17L2Q567V2 206 aa9.59□□□□□ -0.87
SMPD3-205ENST00000563455 Q6ZVH6 145 aa9.59□□□□□ -0.87
SMPD3-205ENST00000563455 RETNQ9HD89 108 aa9.59□□□□□ -0.87
SMPD3-205ENST00000563455 TRAV13-1A0A0B4J241 112 aa9.58□□□□□ -0.88
SMPD3-205ENST00000563455 IGHV3-30-3P0DP02 117 aa9.58□□□□□ -0.88
SMPD3-205ENST00000563455 RBX1P62877 108 aa9.58□□□□□ -0.88
SMPD3-205ENST00000563455 BVES-AS1Q5T3Y7 98 aa9.58□□□□□ -0.88
SMPD3-205ENST00000563455 Q6ZTC4 211 aa9.58□□□□□ -0.88
SMPD3-205ENST00000563455 ORAOV1Q8WV07 137 aa9.58□□□□□ -0.88
SMPD3-205ENST00000563455 TM2D2Q9BX73 214 aa9.58□□□□□ -0.88
SMPD3-205ENST00000563455 SPANXB1Q9NS25 103 aaPredicted RBP9.58□□□□□ -0.88
SMPD3-205ENST00000563455 HUWE1Q7Z6Z7 4374 aaKnown RBP9.58□□□□□ -0.88
SMPD3-205ENST00000563455 IGLV5-39A0A0G2JS06 123 aa9.57□□□□□ -0.88
SMPD3-205ENST00000563455 TMEM238LA0A1B0GVL6 79 aa9.57□□□□□ -0.88
SMPD3-205ENST00000563455 A6NJY4 79 aa9.57□□□□□ -0.88
SMPD3-205ENST00000563455 HINT1P49773 126 aaPredicted RBP9.57□□□□□ -0.88
SMPD3-205ENST00000563455 LYPD5Q6UWN5 251 aa9.57□□□□□ -0.88
SMPD3-205ENST00000563455 COPS9Q8WXC6 57 aa9.57□□□□□ -0.88
SMPD3-205ENST00000563455 CDKN2A-AS1Q9UH64 79 aa9.57□□□□□ -0.88
SMPD3-205ENST00000563455 TMEM238C9JI98 176 aa9.56□□□□□ -0.88
SMPD3-205ENST00000563455 HERV-K104P63124 156 aa9.56□□□□□ -0.88
SMPD3-205ENST00000563455 RNASE13Q5GAN3 156 aaKnown RBP9.56□□□□□ -0.88
SMPD3-205ENST00000563455 LINC00959A0A1B0GUT2 108 aa9.55□□□□□ -0.88
SMPD3-205ENST00000563455 EREGO14944 169 aa9.55□□□□□ -0.88
SMPD3-205ENST00000563455 CIRBPQ14011 172 aaKnown RBP9.55□□□□□ -0.88
SMPD3-205ENST00000563455 BATFQ16520 125 aa9.55□□□□□ -0.88
SMPD3-205ENST00000563455 MAPKAPK5-AS1Q8N8E1 139 aa9.55□□□□□ -0.88
SMPD3-205ENST00000563455 HIST1H4GQ99525 98 aa9.55□□□□□ -0.88
SMPD3-205ENST00000563455 TP73-AS1Q9UF72 201 aa9.55□□□□□ -0.88
SMPD3-205ENST00000563455 TENM2Q9NT68 2774 aa9.54□□□□□ -0.88
SMPD3-205ENST00000563455 IGLV4-60A0A075B6I1 120 aa9.54□□□□□ -0.88
SMPD3-205ENST00000563455 A0A087WZ39 114 aa9.54□□□□□ -0.88
SMPD3-205ENST00000563455 TRAV8-4A0A0B4J246 113 aa9.54□□□□□ -0.88
SMPD3-205ENST00000563455 TIMM17BO60830 172 aa9.54□□□□□ -0.88
SMPD3-205ENST00000563455 TCTAP57738 103 aa9.54□□□□□ -0.88
SMPD3-205ENST00000563455 SRSF9Q13242 221 aaKnown RBP eCLIP9.54□□□□□ -0.88
SMPD3-205ENST00000563455 CEND1Q8N111 149 aa9.54□□□□□ -0.88
SMPD3-205ENST00000563455 NDUFA12Q9UI09 145 aa9.54□□□□□ -0.88
SMPD3-205ENST00000563455 DNAH7Q8WXX0 4024 aa9.54□□□□□ -0.88
SMPD3-205ENST00000563455 IGHV3OR16-9A0A0B4J2B5 98 aa9.53□□□□□ -0.88
SMPD3-205ENST00000563455 A0A0J9YXY3 114 aa9.53□□□□□ -0.88
SMPD3-205ENST00000563455 NDUFA1O15239 70 aa9.53□□□□□ -0.88
SMPD3-205ENST00000563455 NANOS2P60321 138 aaKnown RBP9.53□□□□□ -0.88
SMPD3-205ENST00000563455 SMIM1B2RUZ4 78 aa9.52□□□□□ -0.89
SMPD3-205ENST00000563455 PTTG1IPP53801 180 aa9.52□□□□□ -0.89
SMPD3-205ENST00000563455 CD164L2Q6UWJ8 174 aa9.52□□□□□ -0.89
SMPD3-205ENST00000563455 DYNC2H1Q8NCM8 4307 aaKnown RBP9.51□□□□□ -0.89
SMPD3-205ENST00000563455 K7EP13 123 aa9.51□□□□□ -0.89
SMPD3-205ENST00000563455 ANGP03950 147 aaKnown RBP9.51□□□□□ -0.89
SMPD3-205ENST00000563455 SPINK8P0C7L1 97 aa9.51□□□□□ -0.89
SMPD3-205ENST00000563455 COX6A2Q02221 97 aa9.51□□□□□ -0.89
SMPD3-205ENST00000563455 REG3AQ06141 175 aa9.51□□□□□ -0.89
SMPD3-205ENST00000563455 TTTY13Q9BZ97 58 aa9.51□□□□□ -0.89
SMPD3-205ENST00000563455 PPDPFQ9H3Y8 114 aa9.51□□□□□ -0.89
SMPD3-205ENST00000563455 PRR34Q9NV39 138 aa9.51□□□□□ -0.89
SMPD3-205ENST00000563455 SMIM13P0DJ93 91 aa9.5□□□□□ -0.89
SMPD3-205ENST00000563455 IFITM1P13164 125 aa9.5□□□□□ -0.89
SMPD3-205ENST00000563455 CRPP02741 224 aa9.49□□□□□ -0.89
SMPD3-205ENST00000563455 RPL24P83731 157 aaKnown RBP9.49□□□□□ -0.89
SMPD3-205ENST00000563455 MIAQ16674 131 aa9.49□□□□□ -0.89
SMPD3-205ENST00000563455 LINC00269Q8N2A0 174 aa9.49□□□□□ -0.89
SMPD3-205ENST00000563455 TRAV8-3A0A0A6YYJ7 113 aa9.48□□□□□ -0.89
SMPD3-205ENST00000563455 NUPR2A6NF83 97 aa9.48□□□□□ -0.89
SMPD3-205ENST00000563455 APOMO95445 188 aa9.48□□□□□ -0.89
SMPD3-205ENST00000563455 CXCL5P42830 114 aa9.48□□□□□ -0.89
SMPD3-205ENST00000563455 CCL18P55774 89 aa9.48□□□□□ -0.89
SMPD3-205ENST00000563455 TSPEAR-AS2P59090 65 aa9.48□□□□□ -0.89
SMPD3-205ENST00000563455 KLK5Q9Y337 293 aaPredicted RBP9.48□□□□□ -0.89
SMPD3-205ENST00000563455 RYR2Q92736 4967 aa9.47□□□□□ -0.89
SMPD3-205ENST00000563455 IGHV3-64A0A075B6Q5 118 aa9.47□□□□□ -0.89
SMPD3-205ENST00000563455 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.47□□□□□ -0.89
SMPD3-205ENST00000563455 COX7A2LO14548 114 aa9.47□□□□□ -0.89
SMPD3-205ENST00000563455 LINC01556Q5JQF7 62 aa9.47□□□□□ -0.89
SMPD3-205ENST00000563455 COX7B2Q8TF08 81 aa9.47□□□□□ -0.89
SMPD3-205ENST00000563455 SPANXDQ9BXN6 97 aa9.47□□□□□ -0.89
SMPD3-205ENST00000563455 SPANXCQ9NY87 97 aa9.47□□□□□ -0.89
SMPD3-205ENST00000563455 A0A1B0GWB2 263 aa9.46□□□□□ -0.9
SMPD3-205ENST00000563455 PRSS2P07478 247 aa9.46□□□□□ -0.9
SMPD3-205ENST00000563455 Q8IZM0 81 aa9.46□□□□□ -0.9
SMPD3-205ENST00000563455 CHCHD10Q8WYQ3 142 aaPredicted RBP9.46□□□□□ -0.9
SMPD3-205ENST00000563455 IGKV3OR2-268A0A0C4DH90 116 aa9.45□□□□□ -0.9
SMPD3-205ENST00000563455 ESRGQ1W209 222 aa9.45□□□□□ -0.9
SMPD3-205ENST00000563455 C10orf126Q8N4M7 172 aa9.45□□□□□ -0.9
SMPD3-205ENST00000563455 COX11Q9Y6N1 276 aa9.45□□□□□ -0.9
SMPD3-205ENST00000563455 IGHV3-30P01768 117 aa9.44□□□□□ -0.9
SMPD3-205ENST00000563455 DNAH10OSP0CZ25 163 aa9.44□□□□□ -0.9
SMPD3-205ENST00000563455 IGHV3-30-5P0DP03 117 aa9.44□□□□□ -0.9
SMPD3-205ENST00000563455 MALP21145 153 aa9.44□□□□□ -0.9
SMPD3-205ENST00000563455 XCL1P47992 114 aa9.44□□□□□ -0.9
SMPD3-205ENST00000563455 C6orf226Q5I0X4 101 aa9.44□□□□□ -0.9
SMPD3-205ENST00000563455 ZNF625Q96I27 306 aaPredicted RBP9.44□□□□□ -0.9
SMPD3-205ENST00000563455 Q9H8V8 135 aa9.44□□□□□ -0.9
SMPD3-205ENST00000563455 DNAH1Q9P2D7 4330 aa9.43□□□□□ -0.9
SMPD3-205ENST00000563455 F8WDY8 70 aa9.43□□□□□ -0.9
SMPD3-205ENST00000563455 UPK3BQ9BT76 320 aa9.43□□□□□ -0.9
SMPD3-205ENST00000563455 KLK12Q9UKR0 248 aa9.43□□□□□ -0.9
SMPD3-205ENST00000563455 C9orf118A6NHY6 69 aa9.42□□□□□ -0.9
SMPD3-205ENST00000563455 IBA57-AS1B1ANH7 110 aa9.42□□□□□ -0.9
SMPD3-205ENST00000563455 LY6G6CO95867 125 aa9.42□□□□□ -0.9
SMPD3-205ENST00000563455 FXYD2P54710 66 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms