RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 Q8TAT8 98 aa1.24□□□□□ -2.21
SHCBP1-202ENST00000563219 PPP1R1CQ8WVI7 109 aa1.24□□□□□ -2.21
SHCBP1-202ENST00000563219 C4orf3Q8WVX3 66 aa1.24□□□□□ -2.21
SHCBP1-202ENST00000563219 KRTAP4-1Q9BYQ7 146 aa1.24□□□□□ -2.21
SHCBP1-202ENST00000563219 NMES1Q9C002 83 aa1.24□□□□□ -2.21
SHCBP1-202ENST00000563219 PSENENQ9NZ42 101 aa1.24□□□□□ -2.21
SHCBP1-202ENST00000563219 ORMDL1Q9P0S3 153 aa1.24□□□□□ -2.21
SHCBP1-202ENST00000563219 LAMA4Q16363 1823 aa1.24□□□□□ -2.21
SHCBP1-202ENST00000563219 KIAA1549LQ6ZVL6 1849 aa1.24□□□□□ -2.21
SHCBP1-202ENST00000563219 ATP7BP35670 1465 aa1.24□□□□□ -2.21
SHCBP1-202ENST00000563219 MUC22E2RYF6 1773 aaPredicted RBP1.24□□□□□ -2.21
SHCBP1-202ENST00000563219 NUP188Q5SRE5 1749 aa1.23□□□□□ -2.21
SHCBP1-202ENST00000563219 CASP8AP2Q9UKL3 1982 aa1.23□□□□□ -2.21
SHCBP1-202ENST00000563219 ARHGEF5Q12774 1597 aa1.23□□□□□ -2.21
SHCBP1-202ENST00000563219 MAST1Q9Y2H9 1570 aa1.23□□□□□ -2.21
SHCBP1-202ENST00000563219 HMGN4O00479 90 aa1.23□□□□□ -2.21
SHCBP1-202ENST00000563219 PPP1R17O96001 155 aa1.23□□□□□ -2.21
SHCBP1-202ENST00000563219 DNAL4O96015 105 aa1.23□□□□□ -2.21
SHCBP1-202ENST00000563219 IGHV3-33P01772 117 aa1.23□□□□□ -2.21
SHCBP1-202ENST00000563219 UBE2D1P51668 147 aa1.23□□□□□ -2.21
SHCBP1-202ENST00000563219 SSBP1Q04837 148 aaKnown RBP1.23□□□□□ -2.21
SHCBP1-202ENST00000563219 SPAG11BQ08648 103 aa1.23□□□□□ -2.21
SHCBP1-202ENST00000563219 FAM74A4Q5TZK3 123 aa1.23□□□□□ -2.21
SHCBP1-202ENST00000563219 SPAG11AQ6PDA7 123 aa1.23□□□□□ -2.21
SHCBP1-202ENST00000563219 DMAC1Q96GE9 116 aa1.23□□□□□ -2.21
SHCBP1-202ENST00000563219 CDC42SE2Q9NRR3 84 aa1.23□□□□□ -2.21
SHCBP1-202ENST00000563219 MRPL36Q9P0J6 103 aaKnown RBP1.23□□□□□ -2.21
SHCBP1-202ENST00000563219 LENEPQ9Y5L5 61 aa1.23□□□□□ -2.21
SHCBP1-202ENST00000563219 ARFGEF1Q9Y6D6 1849 aa1.23□□□□□ -2.21
SHCBP1-202ENST00000563219 CPS1P31327 1500 aa1.23□□□□□ -2.21
SHCBP1-202ENST00000563219 ANKRD36CQ5JPF3 1778 aa1.23□□□□□ -2.21
SHCBP1-202ENST00000563219 SORL1Q92673 2214 aa1.23□□□□□ -2.21
SHCBP1-202ENST00000563219 WIZO95785 1651 aa1.23□□□□□ -2.21
SHCBP1-202ENST00000563219 COL4A1P02462 1669 aa1.23□□□□□ -2.21
SHCBP1-202ENST00000563219 DLG5Q8TDM6 1919 aa1.23□□□□□ -2.21
SHCBP1-202ENST00000563219 ARFGEF3Q5TH69 2177 aa1.23□□□□□ -2.21
SHCBP1-202ENST00000563219 USP32Q8NFA0 1604 aa1.22□□□□□ -2.21
SHCBP1-202ENST00000563219 ABCA5Q8WWZ7 1642 aa1.22□□□□□ -2.21
SHCBP1-202ENST00000563219 TSC2P49815 1807 aa1.22□□□□□ -2.21
SHCBP1-202ENST00000563219 ADGRB2O60241 1585 aa1.22□□□□□ -2.21
SHCBP1-202ENST00000563219 CDC42BPGQ6DT37 1551 aa1.22□□□□□ -2.21
SHCBP1-202ENST00000563219 LOC285556D6RIA3 1793 aa1.22□□□□□ -2.21
SHCBP1-202ENST00000563219 LOC101927531A0A1B0GV80 90 aa1.22□□□□□ -2.21
SHCBP1-202ENST00000563219 IGKV2-29A2NJV5 120 aaPredicted RBP1.22□□□□□ -2.21
SHCBP1-202ENST00000563219 LINC01549A6NIU2 74 aa1.22□□□□□ -2.21
SHCBP1-202ENST00000563219 RNASE3P12724 160 aaKnown RBP1.22□□□□□ -2.21
SHCBP1-202ENST00000563219 FCER1GP30273 86 aa1.22□□□□□ -2.21
SHCBP1-202ENST00000563219 C1orf137Q5JT78 98 aa1.22□□□□□ -2.21
SHCBP1-202ENST00000563219 NCBP2-AS2Q69YL0 99 aa1.22□□□□□ -2.21
SHCBP1-202ENST00000563219 CSAG1Q6PB30 78 aa1.22□□□□□ -2.21
SHCBP1-202ENST00000563219 ZNF833PQ6ZTB9 187 aa1.22□□□□□ -2.21
SHCBP1-202ENST00000563219 SMIM4Q8WVI0 70 aa1.22□□□□□ -2.21
SHCBP1-202ENST00000563219 PRR15LQ9BU68 103 aa1.22□□□□□ -2.21
SHCBP1-202ENST00000563219 PROK2Q9HC23 129 aa1.22□□□□□ -2.21
SHCBP1-202ENST00000563219 NDUFA4L2Q9NRX3 87 aa1.22□□□□□ -2.21
SHCBP1-202ENST00000563219 ABRACLQ9P1F3 81 aa1.22□□□□□ -2.21
SHCBP1-202ENST00000563219 KLK9Q9UKQ9 250 aa1.22□□□□□ -2.21
SHCBP1-202ENST00000563219 UBE2D4Q9Y2X8 147 aa1.22□□□□□ -2.21
SHCBP1-202ENST00000563219 R4GMQ9 66 aa1.22□□□□□ -2.21
SHCBP1-202ENST00000563219 INTS1Q8N201 2190 aaKnown RBP1.22□□□□□ -2.21
SHCBP1-202ENST00000563219 COL4A5P29400 1685 aa1.22□□□□□ -2.21
SHCBP1-202ENST00000563219 EIF2AK4Q9P2K8 1649 aaKnown RBP1.22□□□□□ -2.21
SHCBP1-202ENST00000563219 TRPM2O94759 1503 aa1.21□□□□□ -2.22
SHCBP1-202ENST00000563219 EFCAB6Q5THR3 1501 aa1.21□□□□□ -2.22
SHCBP1-202ENST00000563219 OTOGLQ3ZCN5 2332 aa1.21□□□□□ -2.22
SHCBP1-202ENST00000563219 COL4A6Q14031 1691 aa1.21□□□□□ -2.22
SHCBP1-202ENST00000563219 NHSQ6T4R5 1651 aa1.21□□□□□ -2.22
SHCBP1-202ENST00000563219 A0A1B0GUT8 65 aa1.21□□□□□ -2.22
SHCBP1-202ENST00000563219 NDUFB1O75438 58 aa1.21□□□□□ -2.22
SHCBP1-202ENST00000563219 CNBPP62633 177 aaKnown RBP1.21□□□□□ -2.22
SHCBP1-202ENST00000563219 PDE6HQ13956 83 aa1.21□□□□□ -2.22
SHCBP1-202ENST00000563219 Q86TA4 180 aa1.21□□□□□ -2.22
SHCBP1-202ENST00000563219 AMELXQ99217 191 aa1.21□□□□□ -2.22
SHCBP1-202ENST00000563219 CMC2Q9NRP2 79 aa1.21□□□□□ -2.22
SHCBP1-202ENST00000563219 SIP14410 1827 aa1.21□□□□□ -2.22
SHCBP1-202ENST00000563219 ZNF236Q9UL36 1845 aa1.21□□□□□ -2.22
SHCBP1-202ENST00000563219 ADCY10Q96PN6 1610 aa1.21□□□□□ -2.22
SHCBP1-202ENST00000563219 EML5Q05BV3 1969 aa1.21□□□□□ -2.22
SHCBP1-202ENST00000563219 NWD1Q149M9 1564 aa1.21□□□□□ -2.22
SHCBP1-202ENST00000563219 HEATR1Q9H583 2144 aaKnown RBP1.21□□□□□ -2.22
SHCBP1-202ENST00000563219 POLR1AO95602 1720 aaPredicted RBP1.2□□□□□ -2.22
SHCBP1-202ENST00000563219 ZMYM4Q5VZL5 1548 aa1.2□□□□□ -2.22
SHCBP1-202ENST00000563219 ALPK2Q86TB3 2170 aa1.2□□□□□ -2.22
SHCBP1-202ENST00000563219 MED13Q9UHV7 2174 aa1.2□□□□□ -2.22
SHCBP1-202ENST00000563219 KIAA1549Q9HCM3 1950 aa1.2□□□□□ -2.22
SHCBP1-202ENST00000563219 PAPPAQ13219 1627 aa1.2□□□□□ -2.22
SHCBP1-202ENST00000563219 CICQ96RK0 1608 aaPredicted RBP1.2□□□□□ -2.22
SHCBP1-202ENST00000563219 IGKV3D-7A0A0C4DH55 119 aa1.2□□□□□ -2.22
SHCBP1-202ENST00000563219 IGKV3OR2-268A0A0C4DH90 116 aa1.2□□□□□ -2.22
SHCBP1-202ENST00000563219 A0A0J9YY99 117 aa1.2□□□□□ -2.22
SHCBP1-202ENST00000563219 NUPR2A6NF83 97 aa1.2□□□□□ -2.22
SHCBP1-202ENST00000563219 F8VRH5 84 aa1.2□□□□□ -2.22
SHCBP1-202ENST00000563219 M0R3E3 92 aa1.2□□□□□ -2.22
SHCBP1-202ENST00000563219 HCRTO43612 131 aa1.2□□□□□ -2.22
SHCBP1-202ENST00000563219 IGHV3-30P01768 117 aa1.2□□□□□ -2.22
SHCBP1-202ENST00000563219 IGHV3-30-5P0DP03 117 aa1.2□□□□□ -2.22
SHCBP1-202ENST00000563219 SNURFQ9Y675 71 aa1.2□□□□□ -2.22
SHCBP1-202ENST00000563219 SAMD9Q5K651 1589 aa1.2□□□□□ -2.22
SHCBP1-202ENST00000563219 CEP170BQ9Y4F5 1589 aaPredicted RBP1.2□□□□□ -2.22
SHCBP1-202ENST00000563219 SDK1Q7Z5N4 2213 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms