RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 TRGV4A0A0C4DH28 118 aa10.32□□□□□ -0.76
CRTC3-210ENST00000560927 TRBV6-4A0A1B0GX49 114 aa10.32□□□□□ -0.76
CRTC3-210ENST00000560927 F5H768 121 aa10.32□□□□□ -0.76
CRTC3-210ENST00000560927 UBE2L6O14933 153 aa10.32□□□□□ -0.76
CRTC3-210ENST00000560927 ICOSQ9Y6W8 199 aa10.32□□□□□ -0.76
CRTC3-210ENST00000560927 HIVEP2P31629 2446 aa10.32□□□□□ -0.76
CRTC3-210ENST00000560927 KMT2BQ9UMN6 2715 aaPredicted RBP10.31□□□□□ -0.76
CRTC3-210ENST00000560927 CDIP1Q9H305 208 aa10.31□□□□□ -0.76
CRTC3-210ENST00000560927 IFITM1P13164 125 aa10.3□□□□□ -0.76
CRTC3-210ENST00000560927 FHL2Q14192 279 aa10.3□□□□□ -0.76
CRTC3-210ENST00000560927 ATXN8Q156A1 80 aa10.3□□□□□ -0.76
CRTC3-210ENST00000560927 LINC01620Q4KN68 170 aa10.3□□□□□ -0.76
CRTC3-210ENST00000560927 RNF183Q96D59 192 aa10.3□□□□□ -0.76
CRTC3-210ENST00000560927 CIRBPQ14011 172 aaKnown RBP10.29□□□□□ -0.76
CRTC3-210ENST00000560927 LINC00308Q8TCZ7 52 aa10.29□□□□□ -0.76
CRTC3-210ENST00000560927 RPL13AP40429 203 aaKnown RBP10.29□□□□□ -0.76
CRTC3-210ENST00000560927 GAGE6Q13070 117 aa10.29□□□□□ -0.76
CRTC3-210ENST00000560927 SOSTDC1Q6X4U4 206 aa10.28□□□□□ -0.76
CRTC3-210ENST00000560927 FN1P02751 2386 aaKnown RBP10.28□□□□□ -0.76
CRTC3-210ENST00000560927 IGKV3OR2-268A0A0C4DH90 116 aa10.28□□□□□ -0.76
CRTC3-210ENST00000560927 PRIMA1Q86XR5 153 aa10.28□□□□□ -0.76
CRTC3-210ENST00000560927 CLEC2BQ92478 149 aa10.28□□□□□ -0.76
CRTC3-210ENST00000560927 VWFP04275 2813 aa10.27□□□□□ -0.76
CRTC3-210ENST00000560927 IGLV4-60A0A075B6I1 120 aa10.27□□□□□ -0.77
CRTC3-210ENST00000560927 PF4P02776 101 aa10.27□□□□□ -0.77
CRTC3-210ENST00000560927 DEFB130BP0DP73 79 aa10.27□□□□□ -0.77
CRTC3-210ENST00000560927 DEFB130AP0DP74 79 aa10.27□□□□□ -0.77
CRTC3-210ENST00000560927 LINC00482Q8N8I6 264 aa10.27□□□□□ -0.77
CRTC3-210ENST00000560927 SPATA3Q8NHX4 192 aa10.27□□□□□ -0.77
CRTC3-210ENST00000560927 M0QXV9 152 aa10.26□□□□□ -0.77
CRTC3-210ENST00000560927 CRLF1O75462 422 aa10.26□□□□□ -0.77
CRTC3-210ENST00000560927 MEIG1Q5JSS6 88 aa10.26□□□□□ -0.77
CRTC3-210ENST00000560927 GCN1Q92616 2671 aaKnown RBP10.26□□□□□ -0.77
CRTC3-210ENST00000560927 HECTD1Q9ULT8 2610 aa10.26□□□□□ -0.77
CRTC3-210ENST00000560927 TRBV6-8A0A0A6YYG3 113 aa10.26□□□□□ -0.77
CRTC3-210ENST00000560927 NBEAL2Q6ZNJ1 2754 aa10.25□□□□□ -0.77
CRTC3-210ENST00000560927 NTN5Q8WTR8 489 aaPredicted RBP10.25□□□□□ -0.77
CRTC3-210ENST00000560927 TRBV10-2A0A0K0K1G8 114 aa10.25□□□□□ -0.77
CRTC3-210ENST00000560927 H7C423 109 aa10.25□□□□□ -0.77
CRTC3-210ENST00000560927 LY6G6DO95868 133 aa10.24□□□□□ -0.77
CRTC3-210ENST00000560927 COX6CP09669 75 aa10.24□□□□□ -0.77
CRTC3-210ENST00000560927 CHCHD5Q9BSY4 110 aa10.24□□□□□ -0.77
CRTC3-210ENST00000560927 NOTCH2Q04721 2471 aa10.23□□□□□ -0.77
CRTC3-210ENST00000560927 SCGB1A1P11684 91 aa10.23□□□□□ -0.77
CRTC3-210ENST00000560927 XGP55808 180 aa10.23□□□□□ -0.77
CRTC3-210ENST00000560927 TEX49A0A1B0GTD5 131 aa10.23□□□□□ -0.77
CRTC3-210ENST00000560927 MT-ATP8P03928 68 aa10.23□□□□□ -0.77
CRTC3-210ENST00000560927 LST1O00453 97 aa10.22□□□□□ -0.77
CRTC3-210ENST00000560927 OTOGQ6ZRI0 2925 aa10.22□□□□□ -0.77
CRTC3-210ENST00000560927 HERV-K104P63124 156 aa10.22□□□□□ -0.77
CRTC3-210ENST00000560927 LINC01600Q96MT4 127 aa10.22□□□□□ -0.77
CRTC3-210ENST00000560927 X6R8D5 127 aa10.22□□□□□ -0.77
CRTC3-210ENST00000560927 KIR2DL5BQ8NHK3 375 aa10.21□□□□□ -0.77
CRTC3-210ENST00000560927 TOMM7Q9P0U1 55 aa10.21□□□□□ -0.77
CRTC3-210ENST00000560927 C2orf82Q6UX34 121 aa10.21□□□□□ -0.78
CRTC3-210ENST00000560927 LINC00612Q8N6U2 182 aa10.21□□□□□ -0.78
CRTC3-210ENST00000560927 COX7B2Q8TF08 81 aa10.21□□□□□ -0.78
CRTC3-210ENST00000560927 GYPEP15421 78 aa10.2□□□□□ -0.78
CRTC3-210ENST00000560927 IGHV3OR16-9A0A0B4J2B5 98 aa10.19□□□□□ -0.78
CRTC3-210ENST00000560927 TENM1Q9UKZ4 2725 aa10.19□□□□□ -0.78
CRTC3-210ENST00000560927 INAFM1C9JVW0 142 aa10.18□□□□□ -0.78
CRTC3-210ENST00000560927 A0A096LPF7 62 aa10.17□□□□□ -0.78
CRTC3-210ENST00000560927 C5orf38Q86SI9 138 aa10.17□□□□□ -0.78
CRTC3-210ENST00000560927 COPS9Q8WXC6 57 aa10.17□□□□□ -0.78
CRTC3-210ENST00000560927 SHISA2Q6UWI4 295 aa10.17□□□□□ -0.78
CRTC3-210ENST00000560927 MIR7-3HGQ8N6C7 128 aa10.17□□□□□ -0.78
CRTC3-210ENST00000560927 UBE2WQ96B02 151 aa10.17□□□□□ -0.78
CRTC3-210ENST00000560927 H3BT86 120 aa10.16□□□□□ -0.78
CRTC3-210ENST00000560927 DEFB4AO15263 64 aa10.16□□□□□ -0.78
CRTC3-210ENST00000560927 LINC00959A0A1B0GUT2 108 aa10.16□□□□□ -0.78
CRTC3-210ENST00000560927 FAM222AQ5U5X8 452 aa10.16□□□□□ -0.78
CRTC3-210ENST00000560927 A0A087WZ39 114 aa10.15□□□□□ -0.78
CRTC3-210ENST00000560927 COX7A2LO14548 114 aa10.15□□□□□ -0.78
CRTC3-210ENST00000560927 NSD1Q96L73 2696 aaPredicted RBP10.15□□□□□ -0.78
CRTC3-210ENST00000560927 TMEM262E9PQX1 116 aa10.15□□□□□ -0.78
CRTC3-210ENST00000560927 DEFB135Q30KP9 77 aa10.14□□□□□ -0.79
CRTC3-210ENST00000560927 CLPSL2Q6UWE3 100 aa10.14□□□□□ -0.79
CRTC3-210ENST00000560927 PRO0255Q9UI72 69 aa10.14□□□□□ -0.79
CRTC3-210ENST00000560927 LINC00158P58513 81 aa10.13□□□□□ -0.79
CRTC3-210ENST00000560927 C9orf66Q5T8R8 295 aa10.13□□□□□ -0.79
CRTC3-210ENST00000560927 IGKV2-28A0A075B6P5 120 aa10.13□□□□□ -0.79
CRTC3-210ENST00000560927 SMIM9A6NGZ8 99 aa10.13□□□□□ -0.79
CRTC3-210ENST00000560927 IGKV2D-28P01615 120 aa10.13□□□□□ -0.79
CRTC3-210ENST00000560927 XCL1P47992 114 aa10.13□□□□□ -0.79
CRTC3-210ENST00000560927 LINC00337Q8N6G1 96 aa10.12□□□□□ -0.79
CRTC3-210ENST00000560927 C11orf68Q9H3H3 251 aaKnown RBP10.12□□□□□ -0.79
CRTC3-210ENST00000560927 FAM218AQ96MZ4 157 aa10.12□□□□□ -0.79
CRTC3-210ENST00000560927 PPDPFQ9H3Y8 114 aa10.12□□□□□ -0.79
CRTC3-210ENST00000560927 SND1-IT1Q9HBX3 110 aa10.12□□□□□ -0.79
CRTC3-210ENST00000560927 PFN2P35080 140 aa10.11□□□□□ -0.79
CRTC3-210ENST00000560927 TRAV8-4A0A0B4J246 113 aa10.11□□□□□ -0.79
CRTC3-210ENST00000560927 PAX4O43316 350 aa10.11□□□□□ -0.79
CRTC3-210ENST00000560927 TRRAPQ9Y4A5 3859 aa10.1□□□□□ -0.79
CRTC3-210ENST00000560927 A0A1B0GUV1 79 aa10.1□□□□□ -0.79
CRTC3-210ENST00000560927 CCL18P55774 89 aa10.1□□□□□ -0.79
CRTC3-210ENST00000560927 Q8N3U1 123 aa10.1□□□□□ -0.79
CRTC3-210ENST00000560927 LYRM9A8MSI8 78 aa10.09□□□□□ -0.79
CRTC3-210ENST00000560927 CRPP02741 224 aa10.09□□□□□ -0.79
CRTC3-210ENST00000560927 TRAV13-2A0A0B4J235 113 aa10.09□□□□□ -0.79
CRTC3-210ENST00000560927 IGHV4-28A0A0C4DH34 117 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms