RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 NAP1L6A6NFF2 107 aa1.53□□□□□ -2.16
TDP1-217ENST00000557782 LRRC37A2A6NM11 1700 aa1.53□□□□□ -2.16
TDP1-217ENST00000557782 PI4KAP42356 2102 aa1.53□□□□□ -2.16
TDP1-217ENST00000557782 KLKP1Q107X0 134 aa1.53□□□□□ -2.16
TDP1-217ENST00000557782 LINC00575Q6W349 94 aa1.53□□□□□ -2.16
TDP1-217ENST00000557782 SCP2D1Q9UJQ7 156 aa1.53□□□□□ -2.16
TDP1-217ENST00000557782 V9GYV3 84 aa1.53□□□□□ -2.16
TDP1-217ENST00000557782 CACNA1BQ00975 2339 aa1.52□□□□□ -2.17
TDP1-217ENST00000557782 ZNF236Q9UL36 1845 aa1.52□□□□□ -2.17
TDP1-217ENST00000557782 TRBV30A0A0K0K1B3 111 aa1.52□□□□□ -2.17
TDP1-217ENST00000557782 ELOF1P60002 83 aaKnown RBP1.52□□□□□ -2.17
TDP1-217ENST00000557782 LINC00474Q9P2X8 69 aa1.52□□□□□ -2.17
TDP1-217ENST00000557782 TECTAO75443 2155 aa1.52□□□□□ -2.17
TDP1-217ENST00000557782 DOCK11Q5JSL3 2073 aa1.52□□□□□ -2.17
TDP1-217ENST00000557782 PDCD11Q14690 1871 aaKnown RBP1.52□□□□□ -2.17
TDP1-217ENST00000557782 TSC2P49815 1807 aa1.52□□□□□ -2.17
TDP1-217ENST00000557782 PDE4DIPQ5VU43 2346 aa1.51□□□□□ -2.17
TDP1-217ENST00000557782 PLIN4Q96Q06 1357 aa1.51□□□□□ -2.17
TDP1-217ENST00000557782 TRBV7-3A0A075B6L6 115 aa1.51□□□□□ -2.17
TDP1-217ENST00000557782 A0A1W2PPM0 123 aa1.51□□□□□ -2.17
TDP1-217ENST00000557782 CLPSL1A2RUU4 121 aa1.51□□□□□ -2.17
TDP1-217ENST00000557782 GNGT2O14610 69 aa1.51□□□□□ -2.17
TDP1-217ENST00000557782 EDDM3BP56851 147 aa1.51□□□□□ -2.17
TDP1-217ENST00000557782 C10orf99Q6UWK7 81 aa1.51□□□□□ -2.17
TDP1-217ENST00000557782 MGST2Q99735 147 aa1.51□□□□□ -2.17
TDP1-217ENST00000557782 VAMP8Q9BV40 100 aa1.51□□□□□ -2.17
TDP1-217ENST00000557782 TMEM14BQ9NUH8 114 aa1.51□□□□□ -2.17
TDP1-217ENST00000557782 V9GYS6 101 aa1.51□□□□□ -2.17
TDP1-217ENST00000557782 SORL1Q92673 2214 aa1.51□□□□□ -2.17
TDP1-217ENST00000557782 MT-ATP8P03928 68 aa1.5□□□□□ -2.17
TDP1-217ENST00000557782 EFNA4P52798 201 aa1.5□□□□□ -2.17
TDP1-217ENST00000557782 TSLPQ969D9 159 aa1.5□□□□□ -2.17
TDP1-217ENST00000557782 SSC5DA1L4H1 1573 aa1.5□□□□□ -2.17
TDP1-217ENST00000557782 PAPPA2Q9BXP8 1791 aa1.49□□□□□ -2.17
TDP1-217ENST00000557782 ANKRD36A6QL64 1941 aa1.49□□□□□ -2.17
TDP1-217ENST00000557782 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.49□□□□□ -2.17
TDP1-217ENST00000557782 PPP1R17O96001 155 aa1.49□□□□□ -2.17
TDP1-217ENST00000557782 KRTAP12-3P60328 96 aa1.49□□□□□ -2.17
TDP1-217ENST00000557782 LCE3AQ5TA76 89 aa1.49□□□□□ -2.17
TDP1-217ENST00000557782 LENEPQ9Y5L5 61 aa1.49□□□□□ -2.17
TDP1-217ENST00000557782 PLXNB2O15031 1838 aa1.49□□□□□ -2.17
TDP1-217ENST00000557782 hADV29S1A0JD25 119 aa1.48□□□□□ -2.17
TDP1-217ENST00000557782 CRYM-AS1A6NIL9 109 aa1.48□□□□□ -2.17
TDP1-217ENST00000557782 LYNX1P0DP58 116 aa1.48□□□□□ -2.17
TDP1-217ENST00000557782 PMCHL2Q9BQD1 86 aa1.48□□□□□ -2.17
TDP1-217ENST00000557782 DYNLRB1Q9NP97 96 aa1.48□□□□□ -2.17
TDP1-217ENST00000557782 UQCR10Q9UDW1 63 aa1.48□□□□□ -2.17
TDP1-217ENST00000557782 R4GMQ9 66 aa1.48□□□□□ -2.17
TDP1-217ENST00000557782 FLG2Q5D862 2391 aaPredicted RBP1.48□□□□□ -2.17
TDP1-217ENST00000557782 MED13LQ71F56 2210 aa1.47□□□□□ -2.17
TDP1-217ENST00000557782 HIVEP2P31629 2446 aa1.47□□□□□ -2.17
TDP1-217ENST00000557782 LOC285095A0A1B0GVY8 99 aa1.47□□□□□ -2.17
TDP1-217ENST00000557782 SEC11AP67812 179 aa1.47□□□□□ -2.17
TDP1-217ENST00000557782 SPAG11BQ08648 103 aa1.47□□□□□ -2.17
TDP1-217ENST00000557782 SPAG11AQ6PDA7 123 aa1.47□□□□□ -2.17
TDP1-217ENST00000557782 FAM213BQ8TBF2 198 aa1.47□□□□□ -2.17
TDP1-217ENST00000557782 MANBALQ9NQG1 85 aa1.47□□□□□ -2.17
TDP1-217ENST00000557782 A0A087WTM6 91 aa1.46□□□□□ -2.18
TDP1-217ENST00000557782 ATOX1O00244 68 aa1.46□□□□□ -2.18
TDP1-217ENST00000557782 ANGP03950 147 aaKnown RBP1.46□□□□□ -2.18
TDP1-217ENST00000557782 Q0VG73 95 aa1.46□□□□□ -2.18
TDP1-217ENST00000557782 SPINK13Q1W4C9 94 aa1.46□□□□□ -2.18
TDP1-217ENST00000557782 KRTAP21-3Q3LHN1 58 aa1.46□□□□□ -2.18
TDP1-217ENST00000557782 SMIM5Q71RC9 77 aa1.46□□□□□ -2.18
TDP1-217ENST00000557782 FAM167A-AS1Q96KT0 104 aa1.46□□□□□ -2.18
TDP1-217ENST00000557782 BPTFQ12830 3046 aa1.46□□□□□ -2.18
TDP1-217ENST00000557782 KMT2BQ9UMN6 2715 aaPredicted RBP1.45□□□□□ -2.18
TDP1-217ENST00000557782 CHKB-CPT1BH3BT56 60 aa1.45□□□□□ -2.18
TDP1-217ENST00000557782 NDUFC1O43677 76 aa1.45□□□□□ -2.18
TDP1-217ENST00000557782 Q6ZSA8 131 aa1.45□□□□□ -2.18
TDP1-217ENST00000557782 ZNF720Q7Z2F6 126 aa1.45□□□□□ -2.18
TDP1-217ENST00000557782 BAGE3Q86Y29 109 aa1.45□□□□□ -2.18
TDP1-217ENST00000557782 NDUFA4L2Q9NRX3 87 aa1.45□□□□□ -2.18
TDP1-217ENST00000557782 PRO1854Q9UHT4 67 aa1.45□□□□□ -2.18
TDP1-217ENST00000557782 RP1L1Q8IWN7 2480 aaPredicted RBP1.45□□□□□ -2.18
TDP1-217ENST00000557782 SFT2D2O95562 160 aa1.44□□□□□ -2.18
TDP1-217ENST00000557782 COX6CP09669 75 aa1.44□□□□□ -2.18
TDP1-217ENST00000557782 IGLC1P0CG04 106 aa1.44□□□□□ -2.18
TDP1-217ENST00000557782 ASIPP42127 132 aa1.44□□□□□ -2.18
TDP1-217ENST00000557782 CCL18P55774 89 aa1.44□□□□□ -2.18
TDP1-217ENST00000557782 WFDC6Q9BQY6 131 aa1.44□□□□□ -2.18
TDP1-217ENST00000557782 V9GYH0 126 aa1.44□□□□□ -2.18
TDP1-217ENST00000557782 EP400Q96L91 3159 aa1.44□□□□□ -2.18
TDP1-217ENST00000557782 CHD8Q9HCK8 2581 aa1.44□□□□□ -2.18
TDP1-217ENST00000557782 A0A0G2JND7 137 aa1.43□□□□□ -2.18
TDP1-217ENST00000557782 SMIM31A0A1B0GVY4 71 aa1.43□□□□□ -2.18
TDP1-217ENST00000557782 PRB1P04280 392 aa1.43□□□□□ -2.18
TDP1-217ENST00000557782 TRAPPC2P0DI81 140 aa1.43□□□□□ -2.18
TDP1-217ENST00000557782 TRAPPC2BP0DI82 140 aa1.43□□□□□ -2.18
TDP1-217ENST00000557782 SNRPFP62306 86 aaKnown RBP1.43□□□□□ -2.18
TDP1-217ENST00000557782 TMEM170BQ5T4T1 132 aa1.43□□□□□ -2.18
TDP1-217ENST00000557782 C9orf62Q8N4C0 152 aa1.43□□□□□ -2.18
TDP1-217ENST00000557782 Q8N6K4 173 aa1.43□□□□□ -2.18
TDP1-217ENST00000557782 PLAC4Q8WY50 150 aa1.43□□□□□ -2.18
TDP1-217ENST00000557782 Q96NJ1 140 aa1.43□□□□□ -2.18
TDP1-217ENST00000557782 FAIMQ9NVQ4 179 aa1.43□□□□□ -2.18
TDP1-217ENST00000557782 ABCA1O95477 2261 aa1.42□□□□□ -2.18
TDP1-217ENST00000557782 TRGV1A0A0A0MS02 117 aa1.42□□□□□ -2.18
TDP1-217ENST00000557782 TRAV22A0A0B4J277 110 aa1.42□□□□□ -2.18
TDP1-217ENST00000557782 HMGN4O00479 90 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms