RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 TRAV8-3A0A0A6YYJ7 113 aa8.57□□□□□ -1.04
SHMT2-233ENST00000557529 IGKV3OR2-268A0A0C4DH90 116 aa8.57□□□□□ -1.04
SHMT2-233ENST00000557529 LINC00959A0A1B0GUT2 108 aa8.57□□□□□ -1.04
SHMT2-233ENST00000557529 SS18Q15532 418 aa8.57□□□□□ -1.04
SHMT2-233ENST00000557529 COL5A1-AS1Q5SY13 56 aa8.57□□□□□ -1.04
SHMT2-233ENST00000557529 IGLV5-39A0A0G2JS06 123 aa8.56□□□□□ -1.04
SHMT2-233ENST00000557529 ANGP03950 147 aaKnown RBP8.56□□□□□ -1.04
SHMT2-233ENST00000557529 NHLRC4P0CG21 123 aaPredicted RBP8.56□□□□□ -1.04
SHMT2-233ENST00000557529 SMIM1B2RUZ4 78 aa8.55□□□□□ -1.04
SHMT2-233ENST00000557529 ORAOV1Q8WV07 137 aa8.55□□□□□ -1.04
SHMT2-233ENST00000557529 IGHV3OR16-9A0A0B4J2B5 98 aa8.54□□□□□ -1.04
SHMT2-233ENST00000557529 REG3AQ06141 175 aa8.54□□□□□ -1.04
SHMT2-233ENST00000557529 ZFAND6Q6FIF0 208 aa8.54□□□□□ -1.04
SHMT2-233ENST00000557529 LINC00269Q8N2A0 174 aa8.54□□□□□ -1.04
SHMT2-233ENST00000557529 HIST1H4GQ99525 98 aa8.54□□□□□ -1.04
SHMT2-233ENST00000557529 NDUFA12Q9UI09 145 aa8.54□□□□□ -1.04
SHMT2-233ENST00000557529 A0A087WZ39 114 aa8.53□□□□□ -1.04
SHMT2-233ENST00000557529 ESRGQ1W209 222 aa8.53□□□□□ -1.04
SHMT2-233ENST00000557529 LINC01561Q8N1V8 128 aa8.53□□□□□ -1.04
SHMT2-233ENST00000557529 SPANXB1Q9NS25 103 aaPredicted RBP8.53□□□□□ -1.04
SHMT2-233ENST00000557529 A6NDN8 102 aa8.52□□□□□ -1.05
SHMT2-233ENST00000557529 NDUFA1O15239 70 aa8.52□□□□□ -1.05
SHMT2-233ENST00000557529 GCSHP23434 173 aa8.52□□□□□ -1.05
SHMT2-233ENST00000557529 CLPSL2Q6UWE3 100 aa8.52□□□□□ -1.05
SHMT2-233ENST00000557529 CEND1Q8N111 149 aa8.52□□□□□ -1.05
SHMT2-233ENST00000557529 TM2D2Q9BX73 214 aa8.52□□□□□ -1.05
SHMT2-233ENST00000557529 XCL1P47992 114 aa8.51□□□□□ -1.05
SHMT2-233ENST00000557529 SRSF9Q13242 221 aaKnown RBP eCLIP8.51□□□□□ -1.05
SHMT2-233ENST00000557529 CD164L2Q6UWJ8 174 aa8.51□□□□□ -1.05
SHMT2-233ENST00000557529 Q8N3U1 123 aa8.51□□□□□ -1.05
SHMT2-233ENST00000557529 PRR34Q9NV39 138 aa8.51□□□□□ -1.05
SHMT2-233ENST00000557529 A0A0J9YXY3 114 aa8.5□□□□□ -1.05
SHMT2-233ENST00000557529 TMEM238C9JI98 176 aa8.5□□□□□ -1.05
SHMT2-233ENST00000557529 WFDC10BQ8IUB3 73 aa8.5□□□□□ -1.05
SHMT2-233ENST00000557529 C10orf126Q8N4M7 172 aa8.5□□□□□ -1.05
SHMT2-233ENST00000557529 KLK12Q9UKR0 248 aa8.5□□□□□ -1.05
SHMT2-233ENST00000557529 IGHV3-30P01768 117 aa8.49□□□□□ -1.05
SHMT2-233ENST00000557529 IGHV3-33P01772 117 aa8.49□□□□□ -1.05
SHMT2-233ENST00000557529 CRPP02741 224 aa8.49□□□□□ -1.05
SHMT2-233ENST00000557529 IGHV3-30-5P0DP03 117 aa8.49□□□□□ -1.05
SHMT2-233ENST00000557529 PTTG1IPP53801 180 aa8.49□□□□□ -1.05
SHMT2-233ENST00000557529 C5orf38Q86SI9 138 aa8.49□□□□□ -1.05
SHMT2-233ENST00000557529 COX7B2Q8TF08 81 aa8.49□□□□□ -1.05
SHMT2-233ENST00000557529 CHCHD10Q8WYQ3 142 aaPredicted RBP8.49□□□□□ -1.05
SHMT2-233ENST00000557529 TRAV8-4A0A0B4J246 113 aa8.48□□□□□ -1.05
SHMT2-233ENST00000557529 IGLL5B9A064 214 aa8.48□□□□□ -1.05
SHMT2-233ENST00000557529 COX7A2LO14548 114 aa8.48□□□□□ -1.05
SHMT2-233ENST00000557529 TIMM17BO60830 172 aa8.48□□□□□ -1.05
SHMT2-233ENST00000557529 HERV-K104P63124 156 aa8.48□□□□□ -1.05
SHMT2-233ENST00000557529 LINC01556Q5JQF7 62 aa8.48□□□□□ -1.05
SHMT2-233ENST00000557529 TMEM238LA0A1B0GVL6 79 aa8.48□□□□□ -1.05
SHMT2-233ENST00000557529 A6NJY4 79 aa8.48□□□□□ -1.05
SHMT2-233ENST00000557529 FXYD2P54710 66 aa8.48□□□□□ -1.05
SHMT2-233ENST00000557529 CCL18P55774 89 aa8.48□□□□□ -1.05
SHMT2-233ENST00000557529 CIRBPQ14011 172 aaKnown RBP8.48□□□□□ -1.05
SHMT2-233ENST00000557529 SFTA2Q6UW10 78 aa8.48□□□□□ -1.05
SHMT2-233ENST00000557529 Q9H8V8 135 aa8.48□□□□□ -1.05
SHMT2-233ENST00000557529 HUWE1Q7Z6Z7 4374 aaKnown RBP8.47□□□□□ -1.05
SHMT2-233ENST00000557529 MIAQ16674 131 aa8.47□□□□□ -1.05
SHMT2-233ENST00000557529 ENHOQ6UWT2 76 aa8.47□□□□□ -1.05
SHMT2-233ENST00000557529 Q6ZVH6 145 aa8.47□□□□□ -1.05
SHMT2-233ENST00000557529 ZNF625Q96I27 306 aaPredicted RBP8.47□□□□□ -1.05
SHMT2-233ENST00000557529 IGLV10-54A0A075B6I4 117 aa8.46□□□□□ -1.06
SHMT2-233ENST00000557529 A0A1B0GV90 55 aa8.46□□□□□ -1.06
SHMT2-233ENST00000557529 DNAH10OSP0CZ25 163 aa8.46□□□□□ -1.06
SHMT2-233ENST00000557529 UBE2WQ96B02 151 aa8.46□□□□□ -1.06
SHMT2-233ENST00000557529 SPANXDQ9BXN6 97 aa8.46□□□□□ -1.06
SHMT2-233ENST00000557529 SPANXCQ9NY87 97 aa8.46□□□□□ -1.06
SHMT2-233ENST00000557529 TOMM7Q9P0U1 55 aa8.46□□□□□ -1.06
SHMT2-233ENST00000557529 GAGE12HA6NDE8 117 aa8.45□□□□□ -1.06
SHMT2-233ENST00000557529 PRSS2P07478 247 aa8.45□□□□□ -1.06
SHMT2-233ENST00000557529 SMIM13P0DJ93 91 aa8.45□□□□□ -1.06
SHMT2-233ENST00000557529 MALP21145 153 aa8.45□□□□□ -1.06
SHMT2-233ENST00000557529 FOXI1Q12951 378 aa8.45□□□□□ -1.06
SHMT2-233ENST00000557529 Q8IZM0 81 aa8.45□□□□□ -1.06
SHMT2-233ENST00000557529 LITAFQ99732 161 aa8.45□□□□□ -1.06
SHMT2-233ENST00000557529 LINC00588Q9Y4M8 146 aa8.45□□□□□ -1.06
SHMT2-233ENST00000557529 TAX1BP3O14907 124 aa8.44□□□□□ -1.06
SHMT2-233ENST00000557529 APOMO95445 188 aa8.44□□□□□ -1.06
SHMT2-233ENST00000557529 UPK3BQ9BT76 320 aa8.44□□□□□ -1.06
SHMT2-233ENST00000557529 NHP2Q9NX24 153 aaKnown RBP8.44□□□□□ -1.06
SHMT2-233ENST00000557529 K7EP13 123 aa8.43□□□□□ -1.06
SHMT2-233ENST00000557529 IFITM1P13164 125 aa8.43□□□□□ -1.06
SHMT2-233ENST00000557529 RPL24P83731 157 aaKnown RBP8.43□□□□□ -1.06
SHMT2-233ENST00000557529 C6orf226Q5I0X4 101 aa8.43□□□□□ -1.06
SHMT2-233ENST00000557529 MEIG1Q5JSS6 88 aa8.43□□□□□ -1.06
SHMT2-233ENST00000557529 COX11Q9Y6N1 276 aa8.43□□□□□ -1.06
SHMT2-233ENST00000557529 STAB2Q8WWQ8 2551 aa8.42□□□□□ -1.06
SHMT2-233ENST00000557529 A0A1B0GWB2 263 aa8.42□□□□□ -1.06
SHMT2-233ENST00000557529 NUPR2A6NF83 97 aa8.42□□□□□ -1.06
SHMT2-233ENST00000557529 CXCL5P42830 114 aa8.42□□□□□ -1.06
SHMT2-233ENST00000557529 CFAP161Q6P656 301 aa8.42□□□□□ -1.06
SHMT2-233ENST00000557529 COPS9Q8WXC6 57 aa8.42□□□□□ -1.06
SHMT2-233ENST00000557529 KLK5Q9Y337 293 aaPredicted RBP8.42□□□□□ -1.06
SHMT2-233ENST00000557529 ADAMTSL4-AS1Q5T5F5 129 aa8.41□□□□□ -1.06
SHMT2-233ENST00000557529 MUSTN1Q8IVN3 82 aa8.41□□□□□ -1.06
SHMT2-233ENST00000557529 DNAH9Q9NYC9 4486 aa8.41□□□□□ -1.06
SHMT2-233ENST00000557529 CKS1BP61024 79 aa8.4□□□□□ -1.06
SHMT2-233ENST00000557529 C1orf43Q9BWL3 253 aa8.4□□□□□ -1.06
SHMT2-233ENST00000557529 APLNQ9ULZ1 77 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms