RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 SPINK6Q6UWN8 80 aa6.63□□□□□ -1.35
SYNE3-205ENST00000557275 LRCOL1A6NCL2 159 aa6.63□□□□□ -1.35
SYNE3-205ENST00000557275 RPS28P62857 69 aaKnown RBP6.63□□□□□ -1.35
SYNE3-205ENST00000557275 BCE1O60756 84 aa6.62□□□□□ -1.35
SYNE3-205ENST00000557275 NRGNQ92686 78 aa6.62□□□□□ -1.35
SYNE3-205ENST00000557275 CHCHD7Q9BUK0 85 aa6.62□□□□□ -1.35
SYNE3-205ENST00000557275 FSTL3O95633 263 aa6.62□□□□□ -1.35
SYNE3-205ENST00000557275 PSPHP1O15172 72 aa6.62□□□□□ -1.35
SYNE3-205ENST00000557275 M0QY20 66 aa6.62□□□□□ -1.35
SYNE3-205ENST00000557275 VWCEQ96DN2 955 aa6.62□□□□□ -1.35
SYNE3-205ENST00000557275 DEFB131BA0A096LNP1 70 aa6.62□□□□□ -1.35
SYNE3-205ENST00000557275 TTTY13Q9BZ97 58 aa6.62□□□□□ -1.35
SYNE3-205ENST00000557275 FSHBP01225 129 aa6.61□□□□□ -1.35
SYNE3-205ENST00000557275 C1orf137Q5JT78 98 aa6.61□□□□□ -1.35
SYNE3-205ENST00000557275 H0Y9P7 68 aa6.61□□□□□ -1.35
SYNE3-205ENST00000557275 H3BPC8 53 aa6.61□□□□□ -1.35
SYNE3-205ENST00000557275 DCANP1Q8TF63 244 aa6.61□□□□□ -1.35
SYNE3-205ENST00000557275 TRAV10A0A0B4J240 114 aa6.6□□□□□ -1.35
SYNE3-205ENST00000557275 PATE2Q6UY27 113 aa6.6□□□□□ -1.35
SYNE3-205ENST00000557275 XGP55808 180 aa6.6□□□□□ -1.35
SYNE3-205ENST00000557275 Q8N3U1 123 aa6.6□□□□□ -1.35
SYNE3-205ENST00000557275 SMIM11BQ8TCY0 68 aa6.6□□□□□ -1.35
SYNE3-205ENST00000557275 LINC01547P58512 204 aaPredicted RBP6.6□□□□□ -1.35
SYNE3-205ENST00000557275 A8MZ25 164 aa6.6□□□□□ -1.35
SYNE3-205ENST00000557275 Q8N814 137 aa6.6□□□□□ -1.35
SYNE3-205ENST00000557275 LELP1Q5T871 98 aa6.6□□□□□ -1.35
SYNE3-205ENST00000557275 ACYP2P14621 99 aa6.6□□□□□ -1.35
SYNE3-205ENST00000557275 A0A1B0GU69 56 aa6.6□□□□□ -1.35
SYNE3-205ENST00000557275 Q6ZSR3 168 aa6.6□□□□□ -1.35
SYNE3-205ENST00000557275 A0A096LNI7 61 aa6.59□□□□□ -1.35
SYNE3-205ENST00000557275 IGKV2-28A0A075B6P5 120 aa6.59□□□□□ -1.35
SYNE3-205ENST00000557275 IGKV2D-28P01615 120 aa6.59□□□□□ -1.35
SYNE3-205ENST00000557275 KRTAP27-1Q3LI81 207 aa6.59□□□□□ -1.35
SYNE3-205ENST00000557275 HCG22E2RYF7 251 aa6.59□□□□□ -1.35
SYNE3-205ENST00000557275 SLPIP03973 132 aa6.59□□□□□ -1.35
SYNE3-205ENST00000557275 C22orf34Q6ZV56 151 aa6.59□□□□□ -1.35
SYNE3-205ENST00000557275 IGHV4-30-4P0DP06 118 aa6.59□□□□□ -1.36
SYNE3-205ENST00000557275 IGHV4-31P0DP07 118 aa6.59□□□□□ -1.36
SYNE3-205ENST00000557275 Q8N6K4 173 aa6.59□□□□□ -1.36
SYNE3-205ENST00000557275 RETNLBQ9BQ08 111 aa6.59□□□□□ -1.36
SYNE3-205ENST00000557275 DMBT1Q9UGM3 2413 aaPredicted RBP6.58□□□□□ -1.36
SYNE3-205ENST00000557275 MAPK1IP1LQ8NDC0 245 aa6.58□□□□□ -1.36
SYNE3-205ENST00000557275 LINC00574Q9H8X3 128 aa6.58□□□□□ -1.36
SYNE3-205ENST00000557275 IGHV4-61A0A0C4DH41 118 aa6.58□□□□□ -1.36
SYNE3-205ENST00000557275 CNFNQ9BYD5 112 aa6.58□□□□□ -1.36
SYNE3-205ENST00000557275 ZNF702PQ9H963 129 aa6.58□□□□□ -1.36
SYNE3-205ENST00000557275 IGLV1-47P01700 117 aa6.58□□□□□ -1.36
SYNE3-205ENST00000557275 REG3GQ6UW15 175 aa6.58□□□□□ -1.36
SYNE3-205ENST00000557275 FAM215AQ9Y5M1 114 aa6.58□□□□□ -1.36
SYNE3-205ENST00000557275 SOSTDC1Q6X4U4 206 aa6.58□□□□□ -1.36
SYNE3-205ENST00000557275 LTBP2Q14767 1821 aa6.58□□□□□ -1.36
SYNE3-205ENST00000557275 ZNF843Q8N446 348 aa6.57□□□□□ -1.36
SYNE3-205ENST00000557275 A6NDX4 124 aa6.57□□□□□ -1.36
SYNE3-205ENST00000557275 XAGE1AQ9HD64 81 aa6.57□□□□□ -1.36
SYNE3-205ENST00000557275 ODF3BA8MYP8 253 aa6.57□□□□□ -1.36
SYNE3-205ENST00000557275 EGFEM1PQ0D2K5 195 aa6.57□□□□□ -1.36
SYNE3-205ENST00000557275 C11orf53Q8IXP5 236 aa6.57□□□□□ -1.36
SYNE3-205ENST00000557275 CLUHP3Q96NS8 147 aa6.57□□□□□ -1.36
SYNE3-205ENST00000557275 PLAC8L1A1L4L8 177 aa6.57□□□□□ -1.36
SYNE3-205ENST00000557275 DAZAP2Q15038 168 aaPredicted RBP6.57□□□□□ -1.36
SYNE3-205ENST00000557275 LOC100131303A0A0U1RQF7 123 aa6.57□□□□□ -1.36
SYNE3-205ENST00000557275 PRM2P04554 102 aa6.57□□□□□ -1.36
SYNE3-205ENST00000557275 COL4A5P29400 1685 aa6.56□□□□□ -1.36
SYNE3-205ENST00000557275 DNAJC9-AS1A6NH13 148 aa6.56□□□□□ -1.36
SYNE3-205ENST00000557275 SHISA2Q6UWI4 295 aa6.56□□□□□ -1.36
SYNE3-205ENST00000557275 Q6ZTI0 123 aa6.56□□□□□ -1.36
SYNE3-205ENST00000557275 CENPEQ02224 2701 aa6.56□□□□□ -1.36
SYNE3-205ENST00000557275 RPL37AP8A6NKH3 93 aa6.56□□□□□ -1.36
SYNE3-205ENST00000557275 X6R8D5 127 aa6.56□□□□□ -1.36
SYNE3-205ENST00000557275 PRAC2D3DTV9 90 aa6.56□□□□□ -1.36
SYNE3-205ENST00000557275 ZNF80P51504 273 aaPredicted RBP6.56□□□□□ -1.36
SYNE3-205ENST00000557275 K7EQG2 157 aa6.55□□□□□ -1.36
SYNE3-205ENST00000557275 LY6G6EA0A0G2JKS1 128 aa6.55□□□□□ -1.36
SYNE3-205ENST00000557275 C2orf91Q6ZV80 131 aa6.55□□□□□ -1.36
SYNE3-205ENST00000557275 THSD7BQ9C0I4 1608 aa6.55□□□□□ -1.36
SYNE3-205ENST00000557275 CFAP46Q8IYW2 2715 aa6.55□□□□□ -1.36
SYNE3-205ENST00000557275 CRYGAP11844 174 aa6.55□□□□□ -1.36
SYNE3-205ENST00000557275 IGLV9-49A0A0B4J1Y8 123 aa6.55□□□□□ -1.36
SYNE3-205ENST00000557275 RSPO1Q2MKA7 263 aaPredicted RBP6.54□□□□□ -1.36
SYNE3-205ENST00000557275 CEMP1Q6PRD7 247 aaPredicted RBP6.54□□□□□ -1.36
SYNE3-205ENST00000557275 PLA2G2AP14555 144 aa6.54□□□□□ -1.36
SYNE3-205ENST00000557275 STAB1Q9NY15 2570 aa6.54□□□□□ -1.36
SYNE3-205ENST00000557275 NUPR2A6NF83 97 aa6.54□□□□□ -1.36
SYNE3-205ENST00000557275 TNFRSF13BO14836 293 aaPredicted RBP6.54□□□□□ -1.36
SYNE3-205ENST00000557275 SPINT4Q6UDR6 99 aa6.54□□□□□ -1.36
SYNE3-205ENST00000557275 IGHV6-1A0A0B4J1U7 121 aa6.53□□□□□ -1.36
SYNE3-205ENST00000557275 CENPFP49454 3210 aa6.53□□□□□ -1.36
SYNE3-205ENST00000557275 Q6ZTC4 211 aa6.52□□□□□ -1.37
SYNE3-205ENST00000557275 PROK2Q9HC23 129 aa6.52□□□□□ -1.37
SYNE3-205ENST00000557275 LINC00575Q6W349 94 aa6.52□□□□□ -1.37
SYNE3-205ENST00000557275 FBXL19-AS1Q494R0 122 aa6.52□□□□□ -1.37
SYNE3-205ENST00000557275 COL4A1P02462 1669 aa6.52□□□□□ -1.37
SYNE3-205ENST00000557275 E7EUB6 86 aa6.52□□□□□ -1.37
SYNE3-205ENST00000557275 UNQ9165/PRO28630Q6UXU0 137 aa6.52□□□□□ -1.37
SYNE3-205ENST00000557275 LINC01561Q8N1V8 128 aa6.52□□□□□ -1.37
SYNE3-205ENST00000557275 MBD6Q96DN6 1003 aa6.52□□□□□ -1.37
SYNE3-205ENST00000557275 Q8N2B8 174 aa6.52□□□□□ -1.37
SYNE3-205ENST00000557275 DEFB114Q30KQ6 69 aa6.51□□□□□ -1.37
SYNE3-205ENST00000557275 PLA2G2CQ5R387 149 aa6.51□□□□□ -1.37
SYNE3-205ENST00000557275 C1orf64Q8NEQ6 169 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms