RNA–Protein interactions for RNA: ENST00000553889.5

PRKCH-209, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-209ENST00000553889 SFTA2Q6UW10 78 aa6.48□□□□□ -1.37
PRKCH-209ENST00000553889 ARL17AQ8IVW1 177 aa6.48□□□□□ -1.37
PRKCH-209ENST00000553889 NSD1Q96L73 2696 aaPredicted RBP6.48□□□□□ -1.37
PRKCH-209ENST00000553889 NOTCH2Q04721 2471 aa6.48□□□□□ -1.37
PRKCH-209ENST00000553889 FN1P02751 2386 aaKnown RBP6.47□□□□□ -1.37
PRKCH-209ENST00000553889 IGHV3OR16-9A0A0B4J2B5 98 aa6.47□□□□□ -1.37
PRKCH-209ENST00000553889 TEN1Q86WV5 123 aa6.47□□□□□ -1.37
PRKCH-209ENST00000553889 PRO0255Q9UI72 69 aa6.47□□□□□ -1.37
PRKCH-209ENST00000553889 TRAV26-1A0A087WT03 109 aa6.46□□□□□ -1.38
PRKCH-209ENST00000553889 A0A087WZ39 114 aa6.46□□□□□ -1.38
PRKCH-209ENST00000553889 INAFM1C9JVW0 142 aa6.46□□□□□ -1.38
PRKCH-209ENST00000553889 PSMB2P49721 201 aa6.46□□□□□ -1.38
PRKCH-209ENST00000553889 APOC4P55056 127 aa6.46□□□□□ -1.38
PRKCH-209ENST00000553889 RNF151Q2KHN1 245 aa6.46□□□□□ -1.38
PRKCH-209ENST00000553889 ETDBQ3ZM63 59 aa6.46□□□□□ -1.38
PRKCH-209ENST00000553889 LINC00308Q8TCZ7 52 aa6.46□□□□□ -1.38
PRKCH-209ENST00000553889 SPATA25Q9BR10 227 aa6.46□□□□□ -1.38
PRKCH-209ENST00000553889 Q9H8V8 135 aa6.46□□□□□ -1.38
PRKCH-209ENST00000553889 HECTD1Q9ULT8 2610 aa6.45□□□□□ -1.38
PRKCH-209ENST00000553889 TRAV13-1A0A0B4J241 112 aa6.45□□□□□ -1.38
PRKCH-209ENST00000553889 LOC100131303A0A0U1RQF7 123 aa6.45□□□□□ -1.38
PRKCH-209ENST00000553889 A8MZ25 164 aa6.45□□□□□ -1.38
PRKCH-209ENST00000553889 PRSS2P07478 247 aa6.45□□□□□ -1.38
PRKCH-209ENST00000553889 FOXI1Q12951 378 aa6.45□□□□□ -1.38
PRKCH-209ENST00000553889 ATXN8Q156A1 80 aa6.45□□□□□ -1.38
PRKCH-209ENST00000553889 COX6CP09669 75 aa6.44□□□□□ -1.38
PRKCH-209ENST00000553889 MIFP14174 115 aa6.44□□□□□ -1.38
PRKCH-209ENST00000553889 PCP4P48539 62 aa6.44□□□□□ -1.38
PRKCH-209ENST00000553889 SH2D6Q7Z4S9 175 aa6.44□□□□□ -1.38
PRKCH-209ENST00000553889 PPDPFLQ8WWR9 84 aa6.44□□□□□ -1.38
PRKCH-209ENST00000553889 TRIAP1O43715 76 aa6.43□□□□□ -1.38
PRKCH-209ENST00000553889 SCGB1C2P0DMR2 95 aa6.43□□□□□ -1.38
PRKCH-209ENST00000553889 SCGB1A1P11684 91 aa6.43□□□□□ -1.38
PRKCH-209ENST00000553889 LINC01620Q4KN68 170 aa6.43□□□□□ -1.38
PRKCH-209ENST00000553889 FAM222AQ5U5X8 452 aa6.43□□□□□ -1.38
PRKCH-209ENST00000553889 SHISA2Q6UWI4 295 aa6.43□□□□□ -1.38
PRKCH-209ENST00000553889 PRIMA1Q86XR5 153 aa6.43□□□□□ -1.38
PRKCH-209ENST00000553889 COX7B2Q8TF08 81 aa6.43□□□□□ -1.38
PRKCH-209ENST00000553889 ICOSQ9Y6W8 199 aa6.43□□□□□ -1.38
PRKCH-209ENST00000553889 GCN1Q92616 2671 aaKnown RBP6.43□□□□□ -1.38
PRKCH-209ENST00000553889 IGLV4-60A0A075B6I1 120 aa6.42□□□□□ -1.38
PRKCH-209ENST00000553889 TRBV10-2A0A0K0K1G8 114 aa6.42□□□□□ -1.38
PRKCH-209ENST00000553889 H3BT86 120 aa6.42□□□□□ -1.38
PRKCH-209ENST00000553889 GYPEP15421 78 aa6.42□□□□□ -1.38
PRKCH-209ENST00000553889 GAGE6Q13070 117 aa6.42□□□□□ -1.38
PRKCH-209ENST00000553889 CHCHD5Q9BSY4 110 aa6.42□□□□□ -1.38
PRKCH-209ENST00000553889 LINC00959A0A1B0GUT2 108 aa6.41□□□□□ -1.38
PRKCH-209ENST00000553889 IBA57-AS1B1ANH7 110 aa6.41□□□□□ -1.38
PRKCH-209ENST00000553889 LST1O00453 97 aa6.41□□□□□ -1.38
PRKCH-209ENST00000553889 SLC25A20O43772 301 aa6.41□□□□□ -1.38
PRKCH-209ENST00000553889 DEFB130BP0DP73 79 aa6.41□□□□□ -1.38
PRKCH-209ENST00000553889 DEFB130AP0DP74 79 aa6.41□□□□□ -1.38
PRKCH-209ENST00000553889 RPL13AP40429 203 aaKnown RBP6.41□□□□□ -1.38
PRKCH-209ENST00000553889 Q8NAQ8 132 aa6.41□□□□□ -1.38
PRKCH-209ENST00000553889 CARD19Q96LW7 228 aa6.41□□□□□ -1.38
PRKCH-209ENST00000553889 OTOGQ6ZRI0 2925 aa6.41□□□□□ -1.38
PRKCH-209ENST00000553889 GAGE12HA6NDE8 117 aa6.4□□□□□ -1.38
PRKCH-209ENST00000553889 PAX4O43316 350 aa6.4□□□□□ -1.38
PRKCH-209ENST00000553889 MEIG1Q5JSS6 88 aa6.4□□□□□ -1.38
PRKCH-209ENST00000553889 SOSTDC1Q6X4U4 206 aa6.4□□□□□ -1.38
PRKCH-209ENST00000553889 ANKRD29Q8N6D5 301 aa6.4□□□□□ -1.38
PRKCH-209ENST00000553889 TRAV13-2A0A0B4J235 113 aa6.39□□□□□ -1.39
PRKCH-209ENST00000553889 IGHV4-28A0A0C4DH34 117 aa6.39□□□□□ -1.39
PRKCH-209ENST00000553889 ATP5G1P05496 136 aa6.39□□□□□ -1.39
PRKCH-209ENST00000553889 SS18Q15532 418 aa6.39□□□□□ -1.39
PRKCH-209ENST00000553889 Q1RN00 199 aa6.39□□□□□ -1.39
PRKCH-209ENST00000553889 DEFB121Q5J5C9 76 aa6.39□□□□□ -1.39
PRKCH-209ENST00000553889 Q8IZM0 81 aa6.39□□□□□ -1.39
PRKCH-209ENST00000553889 SPATA3Q8NHX4 192 aa6.39□□□□□ -1.39
PRKCH-209ENST00000553889 SIGMAR1Q99720 223 aa6.39□□□□□ -1.39
PRKCH-209ENST00000553889 HIVEP1P15822 2718 aa6.39□□□□□ -1.39
PRKCH-209ENST00000553889 NIPBLQ6KC79 2804 aaeCLIP6.38□□□□□ -1.39
PRKCH-209ENST00000553889 C9JAW5 83 aa6.38□□□□□ -1.39
PRKCH-209ENST00000553889 TMEM262E9PQX1 116 aa6.38□□□□□ -1.39
PRKCH-209ENST00000553889 H3BNG1 76 aa6.38□□□□□ -1.39
PRKCH-209ENST00000553889 COX7A2LO14548 114 aa6.38□□□□□ -1.39
PRKCH-209ENST00000553889 SPART-AS1P0CW21 52 aa6.38□□□□□ -1.39
PRKCH-209ENST00000553889 DAD1P61803 113 aa6.38□□□□□ -1.39
PRKCH-209ENST00000553889 MUC7Q8TAX7 377 aa6.38□□□□□ -1.39
PRKCH-209ENST00000553889 TRACP01848 142 aa6.37□□□□□ -1.39
PRKCH-209ENST00000553889 CXCL5P42830 114 aa6.37□□□□□ -1.39
PRKCH-209ENST00000553889 RPL28P46779 137 aaKnown RBP6.37□□□□□ -1.39
PRKCH-209ENST00000553889 MRPL23Q16540 153 aaKnown RBP6.37□□□□□ -1.39
PRKCH-209ENST00000553889 CD164L2Q6UWJ8 174 aa6.37□□□□□ -1.39
PRKCH-209ENST00000553889 COX17Q14061 63 aa6.36□□□□□ -1.39
PRKCH-209ENST00000553889 DEFB135Q30KP9 77 aa6.36□□□□□ -1.39
PRKCH-209ENST00000553889 LELP1Q5T871 98 aa6.36□□□□□ -1.39
PRKCH-209ENST00000553889 MTURNQ8N3F0 131 aa6.36□□□□□ -1.39
PRKCH-209ENST00000553889 DAND5Q8N907 189 aa6.36□□□□□ -1.39
PRKCH-209ENST00000553889 CDIP1Q9H305 208 aa6.36□□□□□ -1.39
PRKCH-209ENST00000553889 TEP1Q99973 2627 aaKnown RBP6.35□□□□□ -1.39
PRKCH-209ENST00000553889 H7C2G1 150 aa6.35□□□□□ -1.39
PRKCH-209ENST00000553889 IGHV4-30-4P0DP06 118 aa6.35□□□□□ -1.39
PRKCH-209ENST00000553889 EGFEM1PQ0D2K5 195 aa6.35□□□□□ -1.39
PRKCH-209ENST00000553889 KIAA0087Q14695 138 aa6.35□□□□□ -1.39
PRKCH-209ENST00000553889 C21orf62-AS1Q17RA5 79 aa6.35□□□□□ -1.39
PRKCH-209ENST00000553889 MIR7-3HGQ8N6C7 128 aa6.35□□□□□ -1.39
PRKCH-209ENST00000553889 FAM240AA0A1B0GVK7 77 aa6.34□□□□□ -1.39
PRKCH-209ENST00000553889 CCL18P55774 89 aa6.34□□□□□ -1.39
PRKCH-209ENST00000553889 PRR34Q9NV39 138 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms