RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 HSD52Q0P140 79 aa8.65□□□□□ -1.02
CACNB3-217ENST00000550483 MPV17L2Q567V2 206 aa8.65□□□□□ -1.02
CACNB3-217ENST00000550483 STAB2Q8WWQ8 2551 aa8.64□□□□□ -1.03
CACNB3-217ENST00000550483 LINC00959A0A1B0GUT2 108 aa8.64□□□□□ -1.03
CACNB3-217ENST00000550483 SFTA2Q6UW10 78 aa8.64□□□□□ -1.03
CACNB3-217ENST00000550483 C2orf91Q6ZV80 131 aa8.64□□□□□ -1.03
CACNB3-217ENST00000550483 CDKN2A-AS1Q9UH64 79 aa8.64□□□□□ -1.03
CACNB3-217ENST00000550483 IGLV5-39A0A0G2JS06 123 aa8.63□□□□□ -1.03
CACNB3-217ENST00000550483 IGHV3-30-3P0DP02 117 aa8.63□□□□□ -1.03
CACNB3-217ENST00000550483 SCGB1D4Q6XE38 83 aa8.63□□□□□ -1.03
CACNB3-217ENST00000550483 ANGP03950 147 aaKnown RBP8.62□□□□□ -1.03
CACNB3-217ENST00000550483 TCTAP57738 103 aa8.62□□□□□ -1.03
CACNB3-217ENST00000550483 ZFAND6Q6FIF0 208 aa8.62□□□□□ -1.03
CACNB3-217ENST00000550483 DNAH1Q9P2D7 4330 aa8.61□□□□□ -1.03
CACNB3-217ENST00000550483 TRAV8-4A0A0B4J246 113 aa8.61□□□□□ -1.03
CACNB3-217ENST00000550483 IGHV3OR16-9A0A0B4J2B5 98 aa8.61□□□□□ -1.03
CACNB3-217ENST00000550483 CCL18P55774 89 aa8.61□□□□□ -1.03
CACNB3-217ENST00000550483 REG3AQ06141 175 aa8.61□□□□□ -1.03
CACNB3-217ENST00000550483 MAPKAPK5-AS1Q8N8E1 139 aa8.61□□□□□ -1.03
CACNB3-217ENST00000550483 WWC2-AS2Q96NR7 200 aa8.61□□□□□ -1.03
CACNB3-217ENST00000550483 SNHG12Q9BXW3 62 aa8.61□□□□□ -1.03
CACNB3-217ENST00000550483 PRR34Q9NV39 138 aa8.61□□□□□ -1.03
CACNB3-217ENST00000550483 DNAH7Q8WXX0 4024 aa8.61□□□□□ -1.03
CACNB3-217ENST00000550483 A0A087WZ39 114 aa8.6□□□□□ -1.03
CACNB3-217ENST00000550483 SMIM1B2RUZ4 78 aa8.6□□□□□ -1.03
CACNB3-217ENST00000550483 CRPP02741 224 aa8.6□□□□□ -1.03
CACNB3-217ENST00000550483 SPINK8P0C7L1 97 aa8.6□□□□□ -1.03
CACNB3-217ENST00000550483 COX6A2Q02221 97 aa8.6□□□□□ -1.03
CACNB3-217ENST00000550483 LINC01556Q5JQF7 62 aa8.6□□□□□ -1.03
CACNB3-217ENST00000550483 COL5A1-AS1Q5SY13 56 aa8.6□□□□□ -1.03
CACNB3-217ENST00000550483 CD164L2Q6UWJ8 174 aa8.6□□□□□ -1.03
CACNB3-217ENST00000550483 SPANXB1Q9NS25 103 aaPredicted RBP8.6□□□□□ -1.03
CACNB3-217ENST00000550483 TMEM238C9JI98 176 aa8.59□□□□□ -1.03
CACNB3-217ENST00000550483 K7EP13 123 aa8.59□□□□□ -1.03
CACNB3-217ENST00000550483 GCSHP23434 173 aa8.59□□□□□ -1.03
CACNB3-217ENST00000550483 HERV-K104P63124 156 aa8.59□□□□□ -1.03
CACNB3-217ENST00000550483 ESRGQ1W209 222 aa8.59□□□□□ -1.03
CACNB3-217ENST00000550483 Q6ZVH6 145 aa8.59□□□□□ -1.03
CACNB3-217ENST00000550483 LINC00269Q8N2A0 174 aa8.59□□□□□ -1.03
CACNB3-217ENST00000550483 NDUFA12Q9UI09 145 aa8.59□□□□□ -1.03
CACNB3-217ENST00000550483 IGKV3OR2-268A0A0C4DH90 116 aa8.58□□□□□ -1.04
CACNB3-217ENST00000550483 A6NDN8 102 aa8.58□□□□□ -1.04
CACNB3-217ENST00000550483 NUPR2A6NF83 97 aa8.58□□□□□ -1.04
CACNB3-217ENST00000550483 NDUFA1O15239 70 aa8.58□□□□□ -1.04
CACNB3-217ENST00000550483 TIMM17BO60830 172 aa8.58□□□□□ -1.04
CACNB3-217ENST00000550483 TSPEAR-AS2P59090 65 aa8.58□□□□□ -1.04
CACNB3-217ENST00000550483 MIAQ16674 131 aa8.58□□□□□ -1.04
CACNB3-217ENST00000550483 BVES-AS1Q5T3Y7 98 aa8.58□□□□□ -1.04
CACNB3-217ENST00000550483 TTTY13Q9BZ97 58 aa8.58□□□□□ -1.04
CACNB3-217ENST00000550483 TRAV8-3A0A0A6YYJ7 113 aa8.57□□□□□ -1.04
CACNB3-217ENST00000550483 TMEM238LA0A1B0GVL6 79 aa8.57□□□□□ -1.04
CACNB3-217ENST00000550483 A6NJY4 79 aa8.57□□□□□ -1.04
CACNB3-217ENST00000550483 EREGO14944 169 aa8.57□□□□□ -1.04
CACNB3-217ENST00000550483 HINT1P49773 126 aaPredicted RBP8.57□□□□□ -1.04
CACNB3-217ENST00000550483 CIRBPQ14011 172 aaKnown RBP8.57□□□□□ -1.04
CACNB3-217ENST00000550483 ORAOV1Q8WV07 137 aa8.57□□□□□ -1.04
CACNB3-217ENST00000550483 COPS9Q8WXC6 57 aa8.57□□□□□ -1.04
CACNB3-217ENST00000550483 HIST1H4GQ99525 98 aa8.57□□□□□ -1.04
CACNB3-217ENST00000550483 UPK3BQ9BT76 320 aa8.57□□□□□ -1.04
CACNB3-217ENST00000550483 TM2D2Q9BX73 214 aa8.57□□□□□ -1.04
CACNB3-217ENST00000550483 TP73-AS1Q9UF72 201 aa8.57□□□□□ -1.04
CACNB3-217ENST00000550483 KLK5Q9Y337 293 aaPredicted RBP8.57□□□□□ -1.04
CACNB3-217ENST00000550483 IGHV3-64A0A075B6Q5 118 aa8.56□□□□□ -1.04
CACNB3-217ENST00000550483 IGLL5B9A064 214 aa8.56□□□□□ -1.04
CACNB3-217ENST00000550483 COX7A2LO14548 114 aa8.56□□□□□ -1.04
CACNB3-217ENST00000550483 APOMO95445 188 aa8.56□□□□□ -1.04
CACNB3-217ENST00000550483 DNAH10OSP0CZ25 163 aa8.56□□□□□ -1.04
CACNB3-217ENST00000550483 BATFQ16520 125 aa8.56□□□□□ -1.04
CACNB3-217ENST00000550483 C10orf126Q8N4M7 172 aa8.56□□□□□ -1.04
CACNB3-217ENST00000550483 CHCHD10Q8WYQ3 142 aaPredicted RBP8.56□□□□□ -1.04
CACNB3-217ENST00000550483 LYSTQ99698 3801 aa8.56□□□□□ -1.04
CACNB3-217ENST00000550483 A0A0J9YXY3 114 aa8.55□□□□□ -1.04
CACNB3-217ENST00000550483 CXCL5P42830 114 aa8.55□□□□□ -1.04
CACNB3-217ENST00000550483 XCL1P47992 114 aa8.55□□□□□ -1.04
CACNB3-217ENST00000550483 SRSF9Q13242 221 aaKnown RBP eCLIP8.55□□□□□ -1.04
CACNB3-217ENST00000550483 WFDC10BQ8IUB3 73 aa8.55□□□□□ -1.04
CACNB3-217ENST00000550483 CEND1Q8N111 149 aa8.55□□□□□ -1.04
CACNB3-217ENST00000550483 COX7B2Q8TF08 81 aa8.55□□□□□ -1.04
CACNB3-217ENST00000550483 KLK12Q9UKR0 248 aa8.55□□□□□ -1.04
CACNB3-217ENST00000550483 Q8IZM0 81 aa8.54□□□□□ -1.04
CACNB3-217ENST00000550483 IGHV3-30P01768 117 aa8.53□□□□□ -1.04
CACNB3-217ENST00000550483 IGHV3-33P01772 117 aa8.53□□□□□ -1.04
CACNB3-217ENST00000550483 PRSS2P07478 247 aa8.53□□□□□ -1.04
CACNB3-217ENST00000550483 IGHV3-30-5P0DP03 117 aa8.53□□□□□ -1.04
CACNB3-217ENST00000550483 MALP21145 153 aa8.53□□□□□ -1.04
CACNB3-217ENST00000550483 PTTG1IPP53801 180 aa8.53□□□□□ -1.04
CACNB3-217ENST00000550483 CLPSL2Q6UWE3 100 aa8.53□□□□□ -1.04
CACNB3-217ENST00000550483 PPDPFQ9H3Y8 114 aa8.53□□□□□ -1.04
CACNB3-217ENST00000550483 IFITM1P13164 125 aa8.52□□□□□ -1.05
CACNB3-217ENST00000550483 ENHOQ6UWT2 76 aa8.52□□□□□ -1.05
CACNB3-217ENST00000550483 C5orf38Q86SI9 138 aa8.52□□□□□ -1.05
CACNB3-217ENST00000550483 UBE2WQ96B02 151 aa8.52□□□□□ -1.05
CACNB3-217ENST00000550483 RMI2Q96E14 147 aa8.52□□□□□ -1.05
CACNB3-217ENST00000550483 ZNF625Q96I27 306 aaPredicted RBP8.52□□□□□ -1.05
CACNB3-217ENST00000550483 SPANXDQ9BXN6 97 aa8.52□□□□□ -1.05
CACNB3-217ENST00000550483 Q9H8V8 135 aa8.52□□□□□ -1.05
CACNB3-217ENST00000550483 SPANXCQ9NY87 97 aa8.52□□□□□ -1.05
CACNB3-217ENST00000550483 RPL24P83731 157 aaKnown RBP8.51□□□□□ -1.05
CACNB3-217ENST00000550483 FOXI1Q12951 378 aa8.51□□□□□ -1.05
CACNB3-217ENST00000550483 LINC00588Q9Y4M8 146 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms