RNA–Protein interactions for RNA: ENST00000548946.1

UBE2N-202, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3

Gene UBE2N, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-202ENST00000548946 COX6A2Q02221 97 aa3.7□□□□□ -1.82
UBE2N-202ENST00000548946 SPINK13Q1W4C9 94 aa3.7□□□□□ -1.82
UBE2N-202ENST00000548946 BRD3OSQ6XYD6 125 aa3.7□□□□□ -1.82
UBE2N-202ENST00000548946 LRRC75A-AS1Q8N1F1 130 aa3.7□□□□□ -1.82
UBE2N-202ENST00000548946 CDKN2A-AS1Q9UH64 79 aa3.7□□□□□ -1.82
UBE2N-202ENST00000548946 IGHV3OR16-12A0A075B7B8 117 aa3.69□□□□□ -1.82
UBE2N-202ENST00000548946 A0A1B0GX51 115 aa3.69□□□□□ -1.82
UBE2N-202ENST00000548946 RBMY1BA6NDE4 496 aaKnown RBP3.69□□□□□ -1.82
UBE2N-202ENST00000548946 RBMY1EA6NEQ0 496 aaKnown RBP3.69□□□□□ -1.82
UBE2N-202ENST00000548946 H3BUX3 64 aa3.69□□□□□ -1.82
UBE2N-202ENST00000548946 RS1O15537 224 aa3.69□□□□□ -1.82
UBE2N-202ENST00000548946 IGHV3-53P01767 116 aa3.69□□□□□ -1.82
UBE2N-202ENST00000548946 RBMY1DP0C7P1 496 aaKnown RBP3.69□□□□□ -1.82
UBE2N-202ENST00000548946 LINC00694P0DN24 101 aa3.69□□□□□ -1.82
UBE2N-202ENST00000548946 COX7CP15954 63 aa3.69□□□□□ -1.82
UBE2N-202ENST00000548946 PSMB8P28062 276 aa3.69□□□□□ -1.82
UBE2N-202ENST00000548946 SNRPD3P62318 126 aaKnown RBP3.69□□□□□ -1.82
UBE2N-202ENST00000548946 RPS28P62857 69 aaKnown RBP3.69□□□□□ -1.82
UBE2N-202ENST00000548946 HERVK_113P63121 156 aa3.69□□□□□ -1.82
UBE2N-202ENST00000548946 DAZ2Q13117 558 aaKnown RBP3.69□□□□□ -1.82
UBE2N-202ENST00000548946 CIRBPQ14011 172 aaKnown RBP3.69□□□□□ -1.82
UBE2N-202ENST00000548946 C9orf153Q5TBE3 101 aa3.69□□□□□ -1.82
UBE2N-202ENST00000548946 DAZ4Q86SG3 579 aaKnown RBP3.69□□□□□ -1.82
UBE2N-202ENST00000548946 Q8N2B8 174 aa3.69□□□□□ -1.82
UBE2N-202ENST00000548946 ZNF625Q96I27 306 aaPredicted RBP3.69□□□□□ -1.82
UBE2N-202ENST00000548946 FAM218AQ96MZ4 157 aa3.69□□□□□ -1.82
UBE2N-202ENST00000548946 DAZ3Q9NR90 486 aaKnown RBP3.69□□□□□ -1.82
UBE2N-202ENST00000548946 PIEZO2Q9H5I5 2752 aa3.68□□□□□ -1.82
UBE2N-202ENST00000548946 MGAQ8IWI9 3026 aa3.68□□□□□ -1.82
UBE2N-202ENST00000548946 DOPEY2Q9Y3R5 2298 aa3.68□□□□□ -1.82
UBE2N-202ENST00000548946 ABCA2Q9BZC7 2435 aa3.68□□□□□ -1.82
UBE2N-202ENST00000548946 KNCNA6PVL3 124 aa3.68□□□□□ -1.82
UBE2N-202ENST00000548946 CRYGAP11844 174 aa3.68□□□□□ -1.82
UBE2N-202ENST00000548946 RPL28P46779 137 aaKnown RBP3.68□□□□□ -1.82
UBE2N-202ENST00000548946 ZNF415Q09FC8 603 aa3.68□□□□□ -1.82
UBE2N-202ENST00000548946 LINC00242Q5T6M2 205 aa3.68□□□□□ -1.82
UBE2N-202ENST00000548946 COPS9Q8WXC6 57 aa3.68□□□□□ -1.82
UBE2N-202ENST00000548946 OBSCN-AS1Q96MR7 158 aa3.68□□□□□ -1.82
UBE2N-202ENST00000548946 Q9H8V8 135 aa3.68□□□□□ -1.82
UBE2N-202ENST00000548946 CSDC2Q9Y534 153 aaKnown RBP3.68□□□□□ -1.82
UBE2N-202ENST00000548946 TACC2O95359 2948 aa3.68□□□□□ -1.82
UBE2N-202ENST00000548946 AKAP13Q12802 2813 aa3.68□□□□□ -1.82
UBE2N-202ENST00000548946 SPTBN1Q01082 2364 aaKnown RBP3.68□□□□□ -1.82
UBE2N-202ENST00000548946 DMXL2Q8TDJ6 3036 aa3.68□□□□□ -1.82
UBE2N-202ENST00000548946 PTPRQQ9UMZ3 2332 aa3.67□□□□□ -1.82
UBE2N-202ENST00000548946 COL6A6A6NMZ7 2263 aa3.67□□□□□ -1.82
UBE2N-202ENST00000548946 IGHV3-38A0A0C4DH36 116 aa3.67□□□□□ -1.82
UBE2N-202ENST00000548946 F5H768 121 aa3.67□□□□□ -1.82
UBE2N-202ENST00000548946 INAFM2P0DMQ5 153 aa3.67□□□□□ -1.82
UBE2N-202ENST00000548946 KLRB1Q12918 225 aa3.67□□□□□ -1.82
UBE2N-202ENST00000548946 C11orf72Q8NBR9 251 aa3.67□□□□□ -1.82
UBE2N-202ENST00000548946 UPK3BQ9BT76 320 aa3.67□□□□□ -1.82
UBE2N-202ENST00000548946 KLK5Q9Y337 293 aaPredicted RBP3.67□□□□□ -1.82
UBE2N-202ENST00000548946 NACAE9PAV3 2078 aa3.67□□□□□ -1.82
UBE2N-202ENST00000548946 TTC28Q96AY4 2481 aa3.67□□□□□ -1.82
UBE2N-202ENST00000548946 PTPRZ1P23471 2315 aaPredicted RBP3.66□□□□□ -1.82
UBE2N-202ENST00000548946 DCHS2Q6V1P9 2916 aa3.66□□□□□ -1.82
UBE2N-202ENST00000548946 ADGRG4Q8IZF6 3080 aa3.66□□□□□ -1.82
UBE2N-202ENST00000548946 LOC107984640A0A0U1RRK4 108 aa3.66□□□□□ -1.82
UBE2N-202ENST00000548946 J3KT08 172 aa3.66□□□□□ -1.82
UBE2N-202ENST00000548946 ATOX1O00244 68 aa3.66□□□□□ -1.82
UBE2N-202ENST00000548946 PRM2P04554 102 aa3.66□□□□□ -1.82
UBE2N-202ENST00000548946 Q6JHZ5 121 aa3.66□□□□□ -1.82
UBE2N-202ENST00000548946 C10orf99Q6UWK7 81 aa3.66□□□□□ -1.82
UBE2N-202ENST00000548946 HRNRQ86YZ3 2850 aaPredicted RBP3.66□□□□□ -1.82
UBE2N-202ENST00000548946 SPTAN1Q13813 2472 aaKnown RBP3.66□□□□□ -1.82
UBE2N-202ENST00000548946 RIF1Q5UIP0 2472 aaKnown RBP3.66□□□□□ -1.82
UBE2N-202ENST00000548946 SPTA1P02549 2419 aa3.65□□□□□ -1.82
UBE2N-202ENST00000548946 SORL1Q92673 2214 aa3.65□□□□□ -1.83
UBE2N-202ENST00000548946 IGKV2-28A0A075B6P5 120 aa3.65□□□□□ -1.83
UBE2N-202ENST00000548946 TRAV13-2A0A0B4J235 113 aa3.65□□□□□ -1.83
UBE2N-202ENST00000548946 A0A0U1RRA0 63 aa3.65□□□□□ -1.83
UBE2N-202ENST00000548946 IGKV2D-28P01615 120 aa3.65□□□□□ -1.83
UBE2N-202ENST00000548946 SYNJ2BPP57105 145 aa3.65□□□□□ -1.83
UBE2N-202ENST00000548946 DEFB131AP59861 70 aa3.65□□□□□ -1.83
UBE2N-202ENST00000548946 RPL18AQ02543 176 aaKnown RBP3.65□□□□□ -1.83
UBE2N-202ENST00000548946 C5orf47Q569G3 176 aa3.65□□□□□ -1.83
UBE2N-202ENST00000548946 C10orf105Q8TEF2 133 aa3.65□□□□□ -1.83
UBE2N-202ENST00000548946 ZNF292O60281 2723 aa3.65□□□□□ -1.83
UBE2N-202ENST00000548946 BOD1L1Q8NFC6 3051 aa3.65□□□□□ -1.83
UBE2N-202ENST00000548946 hADV29S1A0JD25 119 aa3.64□□□□□ -1.83
UBE2N-202ENST00000548946 SMIM9A6NGZ8 99 aa3.64□□□□□ -1.83
UBE2N-202ENST00000548946 C19orf84I3L1E1 186 aa3.64□□□□□ -1.83
UBE2N-202ENST00000548946 C9orf129Q5T035 196 aaKnown RBP3.64□□□□□ -1.83
UBE2N-202ENST00000548946 NTM-AS1Q6ZSK4 140 aa3.64□□□□□ -1.83
UBE2N-202ENST00000548946 FAM19A5Q7Z5A7 132 aaPredicted RBP3.64□□□□□ -1.83
UBE2N-202ENST00000548946 LINC00337Q8N6G1 96 aa3.64□□□□□ -1.83
UBE2N-202ENST00000548946 OVOL2Q9BRP0 275 aa3.64□□□□□ -1.83
UBE2N-202ENST00000548946 CYSTM1Q9H1C7 97 aa3.64□□□□□ -1.83
UBE2N-202ENST00000548946 Q9HAA7 133 aa3.64□□□□□ -1.83
UBE2N-202ENST00000548946 CDC42SE2Q9NRR3 84 aa3.64□□□□□ -1.83
UBE2N-202ENST00000548946 NBASA2RRP1 2371 aa3.63□□□□□ -1.83
UBE2N-202ENST00000548946 IGKV3D-7A0A0C4DH55 119 aa3.63□□□□□ -1.83
UBE2N-202ENST00000548946 H0YGX0 51 aa3.63□□□□□ -1.83
UBE2N-202ENST00000548946 MSMBP08118 114 aa3.63□□□□□ -1.83
UBE2N-202ENST00000548946 HTN1P15515 57 aa3.63□□□□□ -1.83
UBE2N-202ENST00000548946 NBL1P41271 181 aa3.63□□□□□ -1.83
UBE2N-202ENST00000548946 LINC01561Q8N1V8 128 aa3.63□□□□□ -1.83
UBE2N-202ENST00000548946 SERP2Q8N6R1 65 aa3.63□□□□□ -1.83
UBE2N-202ENST00000548946 SMIM11BQ8TCY0 68 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms