RNA–Protein interactions for RNA: ENST00000548946.1

UBE2N-202, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3

Gene UBE2N, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-202ENST00000548946 AEBP2Q6ZN18 517 aaPredicted RBP28.15■■■□□ 2.1
UBE2N-202ENST00000548946 CHIC1Q5VXU3 224 aa27.19■■□□□ 1.94
UBE2N-202ENST00000548946 SENP3Q9H4L4 574 aaPredicted RBP24.05■■□□□ 1.44
UBE2N-202ENST00000548946 PHF23Q9BUL5 403 aaPredicted RBP23.82■■□□□ 1.4
UBE2N-202ENST00000548946 FOXD1Q16676 465 aa22.3■■□□□ 1.16
UBE2N-202ENST00000548946 PLPPR3Q6T4P5 718 aa21.95■■□□□ 1.1
UBE2N-202ENST00000548946 PPP6R1Q9UPN7 881 aa21.15■□□□□ 0.98
UBE2N-202ENST00000548946 ADRA2BP18089 450 aa21.12■□□□□ 0.97
UBE2N-202ENST00000548946 PIAS4Q8N2W9 510 aaPredicted RBP20.98■□□□□ 0.95
UBE2N-202ENST00000548946 MSH5O43196 834 aa20.79■□□□□ 0.92
UBE2N-202ENST00000548946 POTEDQ86YR6 584 aa19.97■□□□□ 0.79
UBE2N-202ENST00000548946 SCAF1Q9H7N4 1312 aaKnown RBP19.44■□□□□ 0.7
UBE2N-202ENST00000548946 PPP4R3CPQ6ZMV5 832 aa19.27■□□□□ 0.68
UBE2N-202ENST00000548946 MAPK8IP2Q13387 824 aaPredicted RBP19.26■□□□□ 0.67
UBE2N-202ENST00000548946 DMRT2Q9Y5R5 561 aa19.11■□□□□ 0.65
UBE2N-202ENST00000548946 CNKSR2Q8WXI2 1034 aa18.84■□□□□ 0.61
UBE2N-202ENST00000548946 NCBP3Q53F19 620 aaKnown RBP18.72■□□□□ 0.59
UBE2N-202ENST00000548946 HOXD11P31277 338 aaPredicted RBP18.56■□□□□ 0.56
UBE2N-202ENST00000548946 RNF216Q9NWF9 866 aaPredicted RBP18.55■□□□□ 0.56
UBE2N-202ENST00000548946 NPM3O75607 178 aaKnown RBP18.36■□□□□ 0.53
UBE2N-202ENST00000548946 KCNA4P22459 653 aa18.36■□□□□ 0.53
UBE2N-202ENST00000548946 DCAF8L1A6NGE4 600 aa18.34■□□□□ 0.53
UBE2N-202ENST00000548946 DNAJC5BQ9UF47 199 aa17.91■□□□□ 0.46
UBE2N-202ENST00000548946 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.73■□□□□ 0.43
UBE2N-202ENST00000548946 RNF39Q9H2S5 420 aa17.73■□□□□ 0.43
UBE2N-202ENST00000548946 CACNB1Q02641 598 aaPredicted RBP17.58■□□□□ 0.4
UBE2N-202ENST00000548946 C1QBPQ07021 282 aaKnown RBP17.55■□□□□ 0.4
UBE2N-202ENST00000548946 SLC4A1APQ9BWU0 796 aaKnown RBP17.46■□□□□ 0.39
UBE2N-202ENST00000548946 SLC4A2P04920 1241 aa17.41■□□□□ 0.38
UBE2N-202ENST00000548946 U3KPZ7 1027 aaPredicted RBP17.34■□□□□ 0.37
UBE2N-202ENST00000548946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.1■□□□□ 0.33
UBE2N-202ENST00000548946 HNRNPUL2Q1KMD3 747 aaKnown RBP17.1■□□□□ 0.33
UBE2N-202ENST00000548946 FOXD4L1Q9NU39 408 aa17.05■□□□□ 0.32
UBE2N-202ENST00000548946 APLP2Q06481 763 aa17.03■□□□□ 0.32
UBE2N-202ENST00000548946 MYCNP04198 464 aaPredicted RBP17.02■□□□□ 0.32
UBE2N-202ENST00000548946 SAMD1Q6SPF0 538 aaPredicted RBP17■□□□□ 0.31
UBE2N-202ENST00000548946 CAPN15O75808 1086 aa16.97■□□□□ 0.31
UBE2N-202ENST00000548946 SPINK5Q9NQ38 1064 aaPredicted RBP16.96■□□□□ 0.31
UBE2N-202ENST00000548946 ZBTB22O15209 634 aa16.84■□□□□ 0.29
UBE2N-202ENST00000548946 ZNF219Q9P2Y4 722 aaPredicted RBP16.8■□□□□ 0.28
UBE2N-202ENST00000548946 TRHP20396 242 aaPredicted RBP16.79■□□□□ 0.28
UBE2N-202ENST00000548946 DSG3P32926 999 aa16.74■□□□□ 0.27
UBE2N-202ENST00000548946 ABCB7O75027 752 aa16.58■□□□□ 0.24
UBE2N-202ENST00000548946 ATXN8OSP0DMR3 200 aa16.51■□□□□ 0.23
UBE2N-202ENST00000548946 ATF5Q9Y2D1 282 aaPredicted RBP16.51■□□□□ 0.23
UBE2N-202ENST00000548946 EHMT2Q96KQ7 1210 aa16.5■□□□□ 0.23
UBE2N-202ENST00000548946 CSRNP3Q8WYN3 585 aa16.48■□□□□ 0.23
UBE2N-202ENST00000548946 POLA2Q14181 598 aa16.43■□□□□ 0.22
UBE2N-202ENST00000548946 ZBTB12Q9Y330 459 aaPredicted RBP16.18■□□□□ 0.18
UBE2N-202ENST00000548946 RBM42Q9BTD8 480 aaKnown RBP16.04■□□□□ 0.16
UBE2N-202ENST00000548946 FBLN2P98095 1184 aa15.96■□□□□ 0.15
UBE2N-202ENST00000548946 OSCARQ8IYS5 282 aa15.86■□□□□ 0.13
UBE2N-202ENST00000548946 MKRN4PQ13434 485 aaPredicted RBP15.78■□□□□ 0.12
UBE2N-202ENST00000548946 AKT1S1Q96B36 256 aa15.73■□□□□ 0.11
UBE2N-202ENST00000548946 SPDYE2BA6NHP3 402 aa15.7■□□□□ 0.1
UBE2N-202ENST00000548946 SPDYE6P0CI01 402 aa15.7■□□□□ 0.1
UBE2N-202ENST00000548946 SPDYE2Q495Y8 402 aa15.7■□□□□ 0.1
UBE2N-202ENST00000548946 POTEHQ6S545 545 aa15.63■□□□□ 0.09
UBE2N-202ENST00000548946 ZNF692Q9BU19 519 aaPredicted RBP15.57■□□□□ 0.08
UBE2N-202ENST00000548946 REM2Q8IYK8 340 aaPredicted RBP15.55■□□□□ 0.08
UBE2N-202ENST00000548946 SSUH2Q9Y2M2 353 aa15.48■□□□□ 0.07
UBE2N-202ENST00000548946 CHRDL2Q6WN34 429 aa15.47■□□□□ 0.07
UBE2N-202ENST00000548946 PITPNM1O00562 1244 aa15.36■□□□□ 0.05
UBE2N-202ENST00000548946 PABPN1Q86U42 306 aaKnown RBP eCLIP15.33■□□□□ 0.04
UBE2N-202ENST00000548946 SPDYE1Q8NFV5 336 aaPredicted RBP15.33■□□□□ 0.04
UBE2N-202ENST00000548946 SPDYE4A6NLX3 237 aa15.31■□□□□ 0.04
UBE2N-202ENST00000548946 CLEC11AQ9Y240 323 aa15.27■□□□□ 0.04
UBE2N-202ENST00000548946 PIP4P2Q8N4L2 257 aa15.17■□□□□ 0.02
UBE2N-202ENST00000548946 FXR2P51116 673 aaKnown RBP eCLIP15.16■□□□□ 0.02
UBE2N-202ENST00000548946 PRR29P0C7W0 189 aa15.09■□□□□ 0.01
UBE2N-202ENST00000548946 STAG3Q9UJ98 1225 aa15.06■□□□□ 0
UBE2N-202ENST00000548946 PRKAR2AP13861 404 aaKnown RBP14.99□□□□□ -0.01
UBE2N-202ENST00000548946 PROM2Q8N271 834 aa14.96□□□□□ -0.01
UBE2N-202ENST00000548946 FKBP8Q14318 412 aa14.95□□□□□ -0.02
UBE2N-202ENST00000548946 CHADLQ6NUI6 762 aa14.88□□□□□ -0.03
UBE2N-202ENST00000548946 HAX1O00165 279 aa14.83□□□□□ -0.04
UBE2N-202ENST00000548946 CREBZFQ9NS37 354 aa14.75□□□□□ -0.05
UBE2N-202ENST00000548946 FARP1Q9Y4F1 1045 aaPredicted RBP14.74□□□□□ -0.05
UBE2N-202ENST00000548946 EVX2Q03828 476 aa14.72□□□□□ -0.05
UBE2N-202ENST00000548946 SP7Q8TDD2 431 aaPredicted RBP14.7□□□□□ -0.06
UBE2N-202ENST00000548946 C19orf67A6NJJ6 358 aa14.65□□□□□ -0.06
UBE2N-202ENST00000548946 PLEKHG5O94827 1062 aa14.61□□□□□ -0.07
UBE2N-202ENST00000548946 FBXO3Q9UK99 471 aa14.6□□□□□ -0.07
UBE2N-202ENST00000548946 MIER1Q8N108 512 aa14.59□□□□□ -0.07
UBE2N-202ENST00000548946 NPM1P06748 294 aaKnown RBP eCLIP14.58□□□□□ -0.08
UBE2N-202ENST00000548946 CD44P16070 742 aaKnown RBP14.55□□□□□ -0.08
UBE2N-202ENST00000548946 PLCD3Q8N3E9 789 aa14.54□□□□□ -0.08
UBE2N-202ENST00000548946 MNX1P50219 401 aaPredicted RBP14.52□□□□□ -0.09
UBE2N-202ENST00000548946 PAK3O75914 559 aaPredicted RBP14.44□□□□□ -0.1
UBE2N-202ENST00000548946 ZBTB47Q9UFB7 747 aaPredicted RBP14.43□□□□□ -0.1
UBE2N-202ENST00000548946 ZRANB1Q9UGI0 708 aa14.41□□□□□ -0.1
UBE2N-202ENST00000548946 VASPP50552 380 aaPredicted RBP14.35□□□□□ -0.11
UBE2N-202ENST00000548946 CLCN6P51797 869 aa14.35□□□□□ -0.11
UBE2N-202ENST00000548946 GABBR2O75899 941 aa14.34□□□□□ -0.11
UBE2N-202ENST00000548946 ZNF579Q8NAF0 562 aaKnown RBP14.33□□□□□ -0.12
UBE2N-202ENST00000548946 TSPYL2Q9H2G4 693 aaPredicted RBP14.28□□□□□ -0.12
UBE2N-202ENST00000548946 KLHL34Q8N239 644 aa14.23□□□□□ -0.13
UBE2N-202ENST00000548946 RASEFQ8IZ41 740 aa14.22□□□□□ -0.13
UBE2N-202ENST00000548946 NUBP1P53384 320 aa14.2□□□□□ -0.14
UBE2N-202ENST00000548946 PHF12Q96QT6 1004 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms