RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 KRTAP3-1Q9BYR8 98 aa3.33□□□□□ -1.88
APP-217ENST00000548570 CDC42SE2Q9NRR3 84 aa3.33□□□□□ -1.88
APP-217ENST00000548570 KLK12Q9UKR0 248 aa3.33□□□□□ -1.88
APP-217ENST00000548570 CSDC2Q9Y534 153 aaKnown RBP3.33□□□□□ -1.88
APP-217ENST00000548570 HECTD4Q9Y4D8 3996 aa3.33□□□□□ -1.88
APP-217ENST00000548570 IFITM10A6NMD0 228 aa3.32□□□□□ -1.88
APP-217ENST00000548570 TMEM262E9PQX1 116 aa3.32□□□□□ -1.88
APP-217ENST00000548570 K7EMI3 77 aa3.32□□□□□ -1.88
APP-217ENST00000548570 FCER1GP30273 86 aa3.32□□□□□ -1.88
APP-217ENST00000548570 MRPS36P82909 103 aaKnown RBP3.32□□□□□ -1.88
APP-217ENST00000548570 WFDC2Q14508 124 aa3.32□□□□□ -1.88
APP-217ENST00000548570 ORMDL2Q53FV1 153 aa3.32□□□□□ -1.88
APP-217ENST00000548570 RNASEKQ6P5S7 137 aaKnown RBP3.32□□□□□ -1.88
APP-217ENST00000548570 CLPSL2Q6UWE3 100 aa3.32□□□□□ -1.88
APP-217ENST00000548570 FA2HQ7L5A8 372 aa3.32□□□□□ -1.88
APP-217ENST00000548570 ZNF664Q8N3J9 261 aa3.32□□□□□ -1.88
APP-217ENST00000548570 CHCHD1Q96BP2 118 aaKnown RBP3.32□□□□□ -1.88
APP-217ENST00000548570 AMELXQ99217 191 aa3.32□□□□□ -1.88
APP-217ENST00000548570 TIMM21Q9BVV7 248 aa3.32□□□□□ -1.88
APP-217ENST00000548570 PYGO1Q9Y3Y4 419 aa3.32□□□□□ -1.88
APP-217ENST00000548570 IGLV10-54A0A075B6I4 117 aa3.31□□□□□ -1.88
APP-217ENST00000548570 A0A087WX48 190 aa3.31□□□□□ -1.88
APP-217ENST00000548570 C1orf196B1AJZ1 125 aa3.31□□□□□ -1.88
APP-217ENST00000548570 ANGP03950 147 aaKnown RBP3.31□□□□□ -1.88
APP-217ENST00000548570 ZNF25P17030 456 aaPredicted RBP3.31□□□□□ -1.88
APP-217ENST00000548570 REG3AQ06141 175 aa3.31□□□□□ -1.88
APP-217ENST00000548570 GAGE2BQ13066 116 aa3.31□□□□□ -1.88
APP-217ENST00000548570 GAGE2EQ4V326 116 aa3.31□□□□□ -1.88
APP-217ENST00000548570 GAGE2AQ6NT46 116 aa3.31□□□□□ -1.88
APP-217ENST00000548570 SPATA12Q7Z6I5 190 aa3.31□□□□□ -1.88
APP-217ENST00000548570 BAGE3Q86Y29 109 aa3.31□□□□□ -1.88
APP-217ENST00000548570 UBE2WQ96B02 151 aa3.31□□□□□ -1.88
APP-217ENST00000548570 TIMM17AQ99595 171 aa3.31□□□□□ -1.88
APP-217ENST00000548570 SPANXA1Q9NS26 97 aa3.31□□□□□ -1.88
APP-217ENST00000548570 GAGE2DQ9UEU5 116 aa3.31□□□□□ -1.88
APP-217ENST00000548570 CYSLTR1Q9Y271 337 aa3.31□□□□□ -1.88
APP-217ENST00000548570 LRP1BQ9NZR2 4599 aa3.31□□□□□ -1.88
APP-217ENST00000548570 BIRC6Q9NR09 4857 aa3.3□□□□□ -1.88
APP-217ENST00000548570 LINC00959A0A1B0GUT2 108 aa3.3□□□□□ -1.88
APP-217ENST00000548570 A0A1B0GVY2 172 aa3.3□□□□□ -1.88
APP-217ENST00000548570 LRCOL1A6NCL2 159 aa3.3□□□□□ -1.88
APP-217ENST00000548570 K7EP13 123 aa3.3□□□□□ -1.88
APP-217ENST00000548570 UBE2L6O14933 153 aa3.3□□□□□ -1.88
APP-217ENST00000548570 HBDP02042 147 aa3.3□□□□□ -1.88
APP-217ENST00000548570 NDUFA6P56556 154 aa3.3□□□□□ -1.88
APP-217ENST00000548570 SEC61GP60059 68 aa3.3□□□□□ -1.88
APP-217ENST00000548570 RAB5BP61020 215 aa3.3□□□□□ -1.88
APP-217ENST00000548570 COX6A2Q02221 97 aa3.3□□□□□ -1.88
APP-217ENST00000548570 FOXI1Q12951 378 aa3.3□□□□□ -1.88
APP-217ENST00000548570 VAMP3Q15836 100 aa3.3□□□□□ -1.88
APP-217ENST00000548570 LINC00242Q5T6M2 205 aa3.3□□□□□ -1.88
APP-217ENST00000548570 FAM19A3Q7Z5A8 133 aa3.3□□□□□ -1.88
APP-217ENST00000548570 Q8N1X5 172 aa3.3□□□□□ -1.88
APP-217ENST00000548570 C6orf223Q8N319 242 aa3.3□□□□□ -1.88
APP-217ENST00000548570 OR5A1Q8NGJ0 315 aa3.3□□□□□ -1.88
APP-217ENST00000548570 BAALCQ8WXS3 180 aa3.3□□□□□ -1.88
APP-217ENST00000548570 SCGB3A1Q96QR1 104 aa3.3□□□□□ -1.88
APP-217ENST00000548570 CST9LQ9H4G1 147 aa3.3□□□□□ -1.88
APP-217ENST00000548570 Q9HAA7 133 aa3.3□□□□□ -1.88
APP-217ENST00000548570 DNAH8Q96JB1 4490 aa3.3□□□□□ -1.88
APP-217ENST00000548570 IGLV4-69A0A075B6H9 119 aa3.29□□□□□ -1.88
APP-217ENST00000548570 IGHV3OR16-9A0A0B4J2B5 98 aa3.29□□□□□ -1.88
APP-217ENST00000548570 IGKV3OR2-268A0A0C4DH90 116 aa3.29□□□□□ -1.88
APP-217ENST00000548570 HSBP1O75506 76 aa3.29□□□□□ -1.88
APP-217ENST00000548570 FUSP35637 526 aaKnown RBP eCLIP3.29□□□□□ -1.88
APP-217ENST00000548570 UBE2D1P51668 147 aa3.29□□□□□ -1.88
APP-217ENST00000548570 PKIAP61925 76 aa3.29□□□□□ -1.88
APP-217ENST00000548570 C6orf226Q5I0X4 101 aa3.29□□□□□ -1.88
APP-217ENST00000548570 TTC32Q5I0X7 151 aa3.29□□□□□ -1.88
APP-217ENST00000548570 C1orf134Q5TEV5 83 aa3.29□□□□□ -1.88
APP-217ENST00000548570 AMMECR1LQ6DCA0 310 aa3.29□□□□□ -1.88
APP-217ENST00000548570 HIST3H2BBQ8N257 126 aa3.29□□□□□ -1.88
APP-217ENST00000548570 C10orf126Q8N4M7 172 aa3.29□□□□□ -1.88
APP-217ENST00000548570 NTN5Q8WTR8 489 aaPredicted RBP3.29□□□□□ -1.88
APP-217ENST00000548570 CHCHD10Q8WYQ3 142 aaPredicted RBP3.29□□□□□ -1.88
APP-217ENST00000548570 TMEM141Q96I45 108 aa3.29□□□□□ -1.88
APP-217ENST00000548570 RYR1P21817 5038 aa3.28□□□□□ -1.88
APP-217ENST00000548570 TRAV9-2A0A087WT02 112 aa3.28□□□□□ -1.88
APP-217ENST00000548570 TRAV8-3A0A0A6YYJ7 113 aa3.28□□□□□ -1.88
APP-217ENST00000548570 TRAV13-1A0A0B4J241 112 aa3.28□□□□□ -1.88
APP-217ENST00000548570 A0A0J9YXV3 536 aa3.28□□□□□ -1.88
APP-217ENST00000548570 GAGE12HA6NDE8 117 aa3.28□□□□□ -1.88
APP-217ENST00000548570 CCL25O15444 150 aa3.28□□□□□ -1.88
APP-217ENST00000548570 NPSP0C0P6 89 aa3.28□□□□□ -1.88
APP-217ENST00000548570 XCL1P47992 114 aa3.28□□□□□ -1.88
APP-217ENST00000548570 MIAQ16674 131 aa3.28□□□□□ -1.88
APP-217ENST00000548570 C15orf56Q8N910 161 aa3.28□□□□□ -1.88
APP-217ENST00000548570 TMEM18Q96B42 140 aa3.28□□□□□ -1.88
APP-217ENST00000548570 TMEM101Q96IK0 257 aa3.28□□□□□ -1.88
APP-217ENST00000548570 APOBP04114 4563 aaKnown RBP3.27□□□□□ -1.89
APP-217ENST00000548570 KIAA1109Q2LD37 5005 aa3.27□□□□□ -1.89
APP-217ENST00000548570 IGKV2D-24A0A075B6R9 120 aa3.27□□□□□ -1.89
APP-217ENST00000548570 IGLV5-45A0A087WSX0 123 aa3.27□□□□□ -1.89
APP-217ENST00000548570 A0A087WTM6 91 aa3.27□□□□□ -1.89
APP-217ENST00000548570 TRAV8-4A0A0B4J246 113 aa3.27□□□□□ -1.89
APP-217ENST00000548570 PRYO14603 147 aa3.27□□□□□ -1.89
APP-217ENST00000548570 LECT2O14960 151 aa3.27□□□□□ -1.89
APP-217ENST00000548570 PRSS1P07477 247 aa3.27□□□□□ -1.89
APP-217ENST00000548570 FABP4P15090 132 aa3.27□□□□□ -1.89
APP-217ENST00000548570 HERV-K104P63124 156 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms