RNA–Protein interactions for RNA: ENST00000548122.2

PTPRB-206, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 2

Gene PTPRB, Length 4,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-206ENST00000548122 IGF2BP2-AS1Q96M15 143 aa4.1□□□□□ -1.75
PTPRB-206ENST00000548122 LENEPQ9Y5L5 61 aa4.1□□□□□ -1.75
PTPRB-206ENST00000548122 TRAV12-3A0A0B4J271 114 aa4.1□□□□□ -1.75
PTPRB-206ENST00000548122 J3QQQ9 107 aa4.1□□□□□ -1.75
PTPRB-206ENST00000548122 SS18Q15532 418 aa4.1□□□□□ -1.75
PTPRB-206ENST00000548122 Q6ZUT4 128 aa4.1□□□□□ -1.75
PTPRB-206ENST00000548122 EXOC3-AS1Q8N2X6 119 aa4.1□□□□□ -1.75
PTPRB-206ENST00000548122 ZNF503Q96F45 646 aa4.1□□□□□ -1.75
PTPRB-206ENST00000548122 PRO0461Q9UI25 63 aa4.1□□□□□ -1.75
PTPRB-206ENST00000548122 SERP1Q9Y6X1 66 aa4.1□□□□□ -1.75
PTPRB-206ENST00000548122 MXRA5Q9NR99 2828 aa4.09□□□□□ -1.75
PTPRB-206ENST00000548122 SPART-AS1P0CW21 52 aa4.09□□□□□ -1.75
PTPRB-206ENST00000548122 LINC00336Q6ZUF6 198 aa4.09□□□□□ -1.75
PTPRB-206ENST00000548122 CSMD1Q96PZ7 3565 aa4.09□□□□□ -1.75
PTPRB-206ENST00000548122 CCDC179H3BU77 68 aa4.09□□□□□ -1.75
PTPRB-206ENST00000548122 K7EQG2 157 aa4.09□□□□□ -1.75
PTPRB-206ENST00000548122 HLA-DRB4P13762 266 aa4.09□□□□□ -1.75
PTPRB-206ENST00000548122 KIAA0087Q14695 138 aa4.09□□□□□ -1.75
PTPRB-206ENST00000548122 LYZL1Q6UWQ5 148 aa4.09□□□□□ -1.75
PTPRB-206ENST00000548122 SBSPONQ8IVN8 264 aa4.09□□□□□ -1.75
PTPRB-206ENST00000548122 CEND1Q8N111 149 aa4.09□□□□□ -1.75
PTPRB-206ENST00000548122 HLA-DRB4X5D2U9 266 aa4.09□□□□□ -1.75
PTPRB-206ENST00000548122 TRBV19A0A075B6N1 114 aa4.09□□□□□ -1.76
PTPRB-206ENST00000548122 MRGPRG-AS1Q2M3A8 158 aa4.09□□□□□ -1.76
PTPRB-206ENST00000548122 LGALS9BQ3B8N2 356 aa4.09□□□□□ -1.76
PTPRB-206ENST00000548122 ZNF876PQ49A33 203 aa4.09□□□□□ -1.76
PTPRB-206ENST00000548122 LGALS9CQ6DKI2 356 aa4.09□□□□□ -1.76
PTPRB-206ENST00000548122 Q86TA4 180 aa4.09□□□□□ -1.76
PTPRB-206ENST00000548122 UBE2WQ96B02 151 aa4.09□□□□□ -1.76
PTPRB-206ENST00000548122 C8orf49Q96NF6 230 aa4.09□□□□□ -1.76
PTPRB-206ENST00000548122 TRAV13-2A0A0B4J235 113 aa4.08□□□□□ -1.76
PTPRB-206ENST00000548122 RBAKDNA6NC62 111 aa4.08□□□□□ -1.76
PTPRB-206ENST00000548122 MT-ATP8P03928 68 aa4.08□□□□□ -1.76
PTPRB-206ENST00000548122 RPS28P62857 69 aaKnown RBP4.08□□□□□ -1.76
PTPRB-206ENST00000548122 CAMK2N2Q96S95 79 aa4.08□□□□□ -1.76
PTPRB-206ENST00000548122 IGKV2-40A0A087WW87 121 aaPredicted RBP4.08□□□□□ -1.76
PTPRB-206ENST00000548122 TRGV1A0A0A0MS02 117 aa4.08□□□□□ -1.76
PTPRB-206ENST00000548122 hADV29S1A0JD25 119 aa4.08□□□□□ -1.76
PTPRB-206ENST00000548122 IGKV2D-40P01614 121 aaPredicted RBP4.08□□□□□ -1.76
PTPRB-206ENST00000548122 ODF3L2Q3SX64 289 aa4.08□□□□□ -1.76
PTPRB-206ENST00000548122 LCA10Q71F78 164 aa4.08□□□□□ -1.76
PTPRB-206ENST00000548122 TRGV4A0A0C4DH28 118 aa4.08□□□□□ -1.76
PTPRB-206ENST00000548122 IGHV1-58A0A0C4DH39 117 aa4.08□□□□□ -1.76
PTPRB-206ENST00000548122 TRBV27A0A0K0K1C4 114 aa4.08□□□□□ -1.76
PTPRB-206ENST00000548122 GDF5OSQ5U4N7 250 aa4.08□□□□□ -1.76
PTPRB-206ENST00000548122 A0A0J9YWU9 116 aa4.07□□□□□ -1.76
PTPRB-206ENST00000548122 DEFB1P60022 68 aa4.07□□□□□ -1.76
PTPRB-206ENST00000548122 EGFEM1PQ0D2K5 195 aa4.07□□□□□ -1.76
PTPRB-206ENST00000548122 TRPT1Q86TN4 253 aaKnown RBP4.07□□□□□ -1.76
PTPRB-206ENST00000548122 LY6G6CO95867 125 aa4.07□□□□□ -1.76
PTPRB-206ENST00000548122 LTAP01374 205 aa4.07□□□□□ -1.76
PTPRB-206ENST00000548122 ACYP1P07311 99 aa4.07□□□□□ -1.76
PTPRB-206ENST00000548122 FOXI1Q12951 378 aa4.07□□□□□ -1.76
PTPRB-206ENST00000548122 DEFB104AQ8WTQ1 72 aa4.07□□□□□ -1.76
PTPRB-206ENST00000548122 TRBV25-1A0A075B6N4 114 aa4.07□□□□□ -1.76
PTPRB-206ENST00000548122 NXPH4O95158 308 aa4.07□□□□□ -1.76
PTPRB-206ENST00000548122 MUC7Q8TAX7 377 aa4.07□□□□□ -1.76
PTPRB-206ENST00000548122 OVOL2Q9BRP0 275 aa4.07□□□□□ -1.76
PTPRB-206ENST00000548122 Q9H8V8 135 aa4.07□□□□□ -1.76
PTPRB-206ENST00000548122 F8W735 103 aaPredicted RBP4.06□□□□□ -1.76
PTPRB-206ENST00000548122 KLK9Q9UKQ9 250 aa4.06□□□□□ -1.76
PTPRB-206ENST00000548122 NF1P21359 2839 aa4.06□□□□□ -1.76
PTPRB-206ENST00000548122 IGKV1OR2-108A0A075B7D4 117 aa4.06□□□□□ -1.76
PTPRB-206ENST00000548122 IGHV3-53P01767 116 aa4.06□□□□□ -1.76
PTPRB-206ENST00000548122 P0DMU3 169 aa4.06□□□□□ -1.76
PTPRB-206ENST00000548122 FAM231AP0DMU4 169 aa4.06□□□□□ -1.76
PTPRB-206ENST00000548122 FAM231CP0DMU5 169 aa4.06□□□□□ -1.76
PTPRB-206ENST00000548122 MIFP14174 115 aa4.06□□□□□ -1.76
PTPRB-206ENST00000548122 Q8TAT8 98 aa4.06□□□□□ -1.76
PTPRB-206ENST00000548122 IGLV5-39A0A0G2JS06 123 aa4.06□□□□□ -1.76
PTPRB-206ENST00000548122 ZNF73O43830 326 aaPredicted RBP4.06□□□□□ -1.76
PTPRB-206ENST00000548122 DSCR8Q96T75 97 aa4.06□□□□□ -1.76
PTPRB-206ENST00000548122 IGKV1D-37A0A075B6S9 117 aa4.06□□□□□ -1.76
PTPRB-206ENST00000548122 TRBV6-1A0A0K0K1D8 114 aa4.06□□□□□ -1.76
PTPRB-206ENST00000548122 C17orf77Q96MU5 243 aa4.06□□□□□ -1.76
PTPRB-206ENST00000548122 MRPL35Q9NZE8 188 aaKnown RBP4.06□□□□□ -1.76
PTPRB-206ENST00000548122 A0A0J9YX75 114 aa4.05□□□□□ -1.76
PTPRB-206ENST00000548122 NUPR2A6NF83 97 aa4.05□□□□□ -1.76
PTPRB-206ENST00000548122 NPYP01303 97 aa4.05□□□□□ -1.76
PTPRB-206ENST00000548122 DPH3P1Q9H4G8 78 aa4.05□□□□□ -1.76
PTPRB-206ENST00000548122 NDUFC1O43677 76 aa4.05□□□□□ -1.76
PTPRB-206ENST00000548122 MRPL51Q4U2R6 128 aaKnown RBP4.05□□□□□ -1.76
PTPRB-206ENST00000548122 FAM74A4Q5TZK3 123 aa4.05□□□□□ -1.76
PTPRB-206ENST00000548122 FAM104BQ5XKR9 115 aa4.05□□□□□ -1.76
PTPRB-206ENST00000548122 C20orf197Q8N268 126 aa4.05□□□□□ -1.76
PTPRB-206ENST00000548122 GTSF1Q8WW33 167 aa4.05□□□□□ -1.76
PTPRB-206ENST00000548122 RASL10AQ92737 203 aa4.05□□□□□ -1.76
PTPRB-206ENST00000548122 ICOSQ9Y6W8 199 aa4.05□□□□□ -1.76
PTPRB-206ENST00000548122 DEFB131BA0A096LNP1 70 aa4.05□□□□□ -1.76
PTPRB-206ENST00000548122 LEPROTO15243 131 aa4.05□□□□□ -1.76
PTPRB-206ENST00000548122 SH2D1AO60880 128 aa4.05□□□□□ -1.76
PTPRB-206ENST00000548122 UPK3BQ9BT76 320 aa4.05□□□□□ -1.76
PTPRB-206ENST00000548122 NOP10Q9NPE3 64 aaKnown RBP4.05□□□□□ -1.76
PTPRB-206ENST00000548122 CSMD2Q7Z408 3487 aa4.05□□□□□ -1.76
PTPRB-206ENST00000548122 IGHV3-64A0A075B6Q5 118 aa4.04□□□□□ -1.76
PTPRB-206ENST00000548122 IGLV9-49A0A0B4J1Y8 123 aa4.04□□□□□ -1.76
PTPRB-206ENST00000548122 IGHV4-28A0A0C4DH34 117 aa4.04□□□□□ -1.76
PTPRB-206ENST00000548122 IGLV2-8P01709 118 aa4.04□□□□□ -1.76
PTPRB-206ENST00000548122 LOC100131303A0A0U1RQF7 123 aa4.04□□□□□ -1.76
PTPRB-206ENST00000548122 UBL5Q9BZL1 73 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms