RNA–Protein interactions for RNA: ENST00000545067.6

CCDC7-210, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 4,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-210ENST00000545067 A0A0B4J2C4 111 aa6.28□□□□□ -1.4
CCDC7-210ENST00000545067 TRBV10-2A0A0K0K1G8 114 aa6.28□□□□□ -1.4
CCDC7-210ENST00000545067 C1orf158Q8N1D5 194 aa6.28□□□□□ -1.4
CCDC7-210ENST00000545067 LINC01006Q8NI28 216 aa6.28□□□□□ -1.4
CCDC7-210ENST00000545067 MRPS36P82909 103 aaKnown RBP6.28□□□□□ -1.4
CCDC7-210ENST00000545067 S100A7L2Q5SY68 101 aa6.28□□□□□ -1.4
CCDC7-210ENST00000545067 RNF152Q8N8N0 203 aa6.28□□□□□ -1.4
CCDC7-210ENST00000545067 LINC00308Q8TCZ7 52 aa6.28□□□□□ -1.4
CCDC7-210ENST00000545067 CMC4P56277 68 aaPredicted RBP6.27□□□□□ -1.41
CCDC7-210ENST00000545067 DAD1P61803 113 aa6.27□□□□□ -1.41
CCDC7-210ENST00000545067 PYGO1Q9Y3Y4 419 aa6.27□□□□□ -1.41
CCDC7-210ENST00000545067 ITPR2Q14571 2701 aa6.27□□□□□ -1.41
CCDC7-210ENST00000545067 UBE2D3P61077 147 aa6.27□□□□□ -1.41
CCDC7-210ENST00000545067 UBE2D2P62837 147 aa6.27□□□□□ -1.41
CCDC7-210ENST00000545067 ATP6V0E2Q8NHE4 81 aa6.27□□□□□ -1.41
CCDC7-210ENST00000545067 COX7B2Q8TF08 81 aa6.27□□□□□ -1.41
CCDC7-210ENST00000545067 C16orf74Q96GX8 76 aa6.27□□□□□ -1.41
CCDC7-210ENST00000545067 IFITM1P13164 125 aa6.27□□□□□ -1.41
CCDC7-210ENST00000545067 LINC00242Q5T6M2 205 aa6.27□□□□□ -1.41
CCDC7-210ENST00000545067 TRAV4A0A0B4J268 109 aa6.26□□□□□ -1.41
CCDC7-210ENST00000545067 RNF183Q96D59 192 aa6.26□□□□□ -1.41
CCDC7-210ENST00000545067 SETXQ7Z333 2677 aaKnown RBP6.26□□□□□ -1.41
CCDC7-210ENST00000545067 BRI3O95415 125 aa6.26□□□□□ -1.41
CCDC7-210ENST00000545067 SS18L2Q9UHA2 77 aa6.26□□□□□ -1.41
CCDC7-210ENST00000545067 MXRA5Q9NR99 2828 aa6.25□□□□□ -1.41
CCDC7-210ENST00000545067 J3QKU1 62 aa6.25□□□□□ -1.41
CCDC7-210ENST00000545067 HIST1H4AP62805 103 aaKnown RBP6.25□□□□□ -1.41
CCDC7-210ENST00000545067 KLK9Q2XQG4 91 aa6.25□□□□□ -1.41
CCDC7-210ENST00000545067 PRO0461Q9UI25 63 aa6.25□□□□□ -1.41
CCDC7-210ENST00000545067 TRBV10-1A0A0K0K1A3 114 aa6.25□□□□□ -1.41
CCDC7-210ENST00000545067 LINC00526Q96FQ7 95 aa6.25□□□□□ -1.41
CCDC7-210ENST00000545067 TRAV25A0A0B4J276 109 aa6.24□□□□□ -1.41
CCDC7-210ENST00000545067 AMELXQ99217 191 aa6.24□□□□□ -1.41
CCDC7-210ENST00000545067 LECT2O14960 151 aa6.24□□□□□ -1.41
CCDC7-210ENST00000545067 SPATA25Q9BR10 227 aa6.24□□□□□ -1.41
CCDC7-210ENST00000545067 SLPIP03973 132 aa6.24□□□□□ -1.41
CCDC7-210ENST00000545067 MGAM2Q2M2H8 2515 aa6.24□□□□□ -1.41
CCDC7-210ENST00000545067 TRAV13-2A0A0B4J235 113 aa6.23□□□□□ -1.41
CCDC7-210ENST00000545067 TRBV30A0A0K0K1B3 111 aa6.23□□□□□ -1.41
CCDC7-210ENST00000545067 NDUFA1O15239 70 aa6.23□□□□□ -1.41
CCDC7-210ENST00000545067 EIF4EBP3O60516 100 aaPredicted RBP6.23□□□□□ -1.41
CCDC7-210ENST00000545067 MAST4O15021 2626 aa6.23□□□□□ -1.41
CCDC7-210ENST00000545067 IGLV4-60A0A075B6I1 120 aa6.23□□□□□ -1.41
CCDC7-210ENST00000545067 H7C423 109 aa6.23□□□□□ -1.41
CCDC7-210ENST00000545067 FAM222AQ5U5X8 452 aa6.23□□□□□ -1.41
CCDC7-210ENST00000545067 C11orf72Q8NBR9 251 aa6.23□□□□□ -1.41
CCDC7-210ENST00000545067 HERV-K104P63124 156 aa6.22□□□□□ -1.41
CCDC7-210ENST00000545067 LAMTOR3Q9UHA4 124 aa6.22□□□□□ -1.41
CCDC7-210ENST00000545067 SMIM1B2RUZ4 78 aa6.22□□□□□ -1.41
CCDC7-210ENST00000545067 TIRAPP58753 221 aa6.22□□□□□ -1.41
CCDC7-210ENST00000545067 LINC00269Q8N2A0 174 aa6.22□□□□□ -1.41
CCDC7-210ENST00000545067 CDC42SE2Q9NRR3 84 aa6.22□□□□□ -1.41
CCDC7-210ENST00000545067 IGKV3D-7A0A0C4DH55 119 aa6.22□□□□□ -1.41
CCDC7-210ENST00000545067 TRBV6-8A0A0A6YYG3 113 aa6.21□□□□□ -1.42
CCDC7-210ENST00000545067 H3BT86 120 aa6.21□□□□□ -1.42
CCDC7-210ENST00000545067 NTM-AS1Q6ZSK4 140 aa6.21□□□□□ -1.42
CCDC7-210ENST00000545067 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.21□□□□□ -1.42
CCDC7-210ENST00000545067 CDIP1Q9H305 208 aa6.21□□□□□ -1.42
CCDC7-210ENST00000545067 C14orf132Q9NPU4 83 aa6.21□□□□□ -1.42
CCDC7-210ENST00000545067 EDA2RQ9HAV5 297 aa6.21□□□□□ -1.42
CCDC7-210ENST00000545067 FAM236AA0A1B0GUQ0 79 aa6.2□□□□□ -1.42
CCDC7-210ENST00000545067 FAM236BA0A1B0GV22 79 aa6.2□□□□□ -1.42
CCDC7-210ENST00000545067 COX7A2LO14548 114 aa6.2□□□□□ -1.42
CCDC7-210ENST00000545067 KLK12Q9UKR0 248 aa6.2□□□□□ -1.42
CCDC7-210ENST00000545067 UNC79Q9P2D8 2635 aa6.2□□□□□ -1.42
CCDC7-210ENST00000545067 INAFM1C9JVW0 142 aa6.2□□□□□ -1.42
CCDC7-210ENST00000545067 NCR3O14931 201 aa6.2□□□□□ -1.42
CCDC7-210ENST00000545067 SPANXDQ9BXN6 97 aa6.2□□□□□ -1.42
CCDC7-210ENST00000545067 SPANXCQ9NY87 97 aa6.2□□□□□ -1.42
CCDC7-210ENST00000545067 LST1O00453 97 aa6.2□□□□□ -1.42
CCDC7-210ENST00000545067 LRRC75A-AS1Q8N1F1 130 aa6.2□□□□□ -1.42
CCDC7-210ENST00000545067 Q8N2B8 174 aa6.2□□□□□ -1.42
CCDC7-210ENST00000545067 NOTCH1P46531 2555 aa6.19□□□□□ -1.42
CCDC7-210ENST00000545067 INAFM2P0DMQ5 153 aa6.19□□□□□ -1.42
CCDC7-210ENST00000545067 PRR3P79522 188 aaKnown RBP6.19□□□□□ -1.42
CCDC7-210ENST00000545067 BSNQ9UPA5 3926 aa6.19□□□□□ -1.42
CCDC7-210ENST00000545067 PRO0255Q9UI72 69 aa6.19□□□□□ -1.42
CCDC7-210ENST00000545067 BEAN1Q3B7T3 259 aa6.18□□□□□ -1.42
CCDC7-210ENST00000545067 APCP25054 2843 aa6.17□□□□□ -1.42
CCDC7-210ENST00000545067 TRBV6-4A0A1B0GX49 114 aa6.17□□□□□ -1.42
CCDC7-210ENST00000545067 NBEAL1Q6ZS30 2694 aa6.17□□□□□ -1.42
CCDC7-210ENST00000545067 NDUFV3P56181 108 aaKnown RBP6.17□□□□□ -1.42
CCDC7-210ENST00000545067 FHL3Q13643 280 aa6.17□□□□□ -1.42
CCDC7-210ENST00000545067 C9orf116Q5BN46 136 aaPredicted RBP6.17□□□□□ -1.42
CCDC7-210ENST00000545067 CLUHP3Q96NS8 147 aa6.17□□□□□ -1.42
CCDC7-210ENST00000545067 C9orf153Q5TBE3 101 aa6.17□□□□□ -1.42
CCDC7-210ENST00000545067 CSMD2Q7Z408 3487 aa6.16□□□□□ -1.42
CCDC7-210ENST00000545067 CCL18P55774 89 aa6.16□□□□□ -1.42
CCDC7-210ENST00000545067 A0A096LNT2 108 aa6.16□□□□□ -1.42
CCDC7-210ENST00000545067 APOC4P55056 127 aa6.16□□□□□ -1.42
CCDC7-210ENST00000545067 SOSTDC1Q6X4U4 206 aa6.16□□□□□ -1.42
CCDC7-210ENST00000545067 FAM110AQ9BQ89 295 aa6.16□□□□□ -1.42
CCDC7-210ENST00000545067 LINC00959A0A1B0GUT2 108 aa6.16□□□□□ -1.42
CCDC7-210ENST00000545067 ZNF561-AS1K7EIQ3 104 aa6.16□□□□□ -1.42
CCDC7-210ENST00000545067 SMIM11BQ8TCY0 68 aa6.16□□□□□ -1.42
CCDC7-210ENST00000545067 IGLV1-51P01701 117 aa6.15□□□□□ -1.42
CCDC7-210ENST00000545067 HAMPP81172 84 aa6.15□□□□□ -1.42
CCDC7-210ENST00000545067 CHCHD10Q8WYQ3 142 aaPredicted RBP6.15□□□□□ -1.42
CCDC7-210ENST00000545067 XAGE1AQ9HD64 81 aa6.15□□□□□ -1.42
CCDC7-210ENST00000545067 NIPBLQ6KC79 2804 aaeCLIP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms