RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 GAGE2DQ9UEU5 116 aa11.4□□□□□ -0.58
SCNN1A-221ENST00000543768 TRBV6-4A0A1B0GX49 114 aa11.4□□□□□ -0.58
SCNN1A-221ENST00000543768 SNCGO76070 127 aa11.4□□□□□ -0.58
SCNN1A-221ENST00000543768 NDUFV3P56181 108 aaKnown RBP11.4□□□□□ -0.58
SCNN1A-221ENST00000543768 CDC42SE2Q9NRR3 84 aa11.4□□□□□ -0.58
SCNN1A-221ENST00000543768 C9JAW5 83 aa11.39□□□□□ -0.59
SCNN1A-221ENST00000543768 HERVK_113P63121 156 aa11.39□□□□□ -0.59
SCNN1A-221ENST00000543768 GCN1Q92616 2671 aaKnown RBP11.39□□□□□ -0.59
SCNN1A-221ENST00000543768 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.38□□□□□ -0.59
SCNN1A-221ENST00000543768 IGLV5-39A0A0G2JS06 123 aa11.38□□□□□ -0.59
SCNN1A-221ENST00000543768 PRSS2P07478 247 aa11.38□□□□□ -0.59
SCNN1A-221ENST00000543768 FHL2Q14192 279 aa11.38□□□□□ -0.59
SCNN1A-221ENST00000543768 C2CD3Q4AC94 2353 aa11.37□□□□□ -0.59
SCNN1A-221ENST00000543768 TRGV4A0A0C4DH28 118 aa11.37□□□□□ -0.59
SCNN1A-221ENST00000543768 Q6Q795 121 aa11.37□□□□□ -0.59
SCNN1A-221ENST00000543768 TRAV13-1A0A0B4J241 112 aa11.36□□□□□ -0.59
SCNN1A-221ENST00000543768 NDUFA1O15239 70 aa11.36□□□□□ -0.59
SCNN1A-221ENST00000543768 MIAQ16674 131 aa11.36□□□□□ -0.59
SCNN1A-221ENST00000543768 CFAP161Q6P656 301 aa11.36□□□□□ -0.59
SCNN1A-221ENST00000543768 TMEM243Q9BU79 118 aa11.36□□□□□ -0.59
SCNN1A-221ENST00000543768 TTC32Q5I0X7 151 aa11.36□□□□□ -0.59
SCNN1A-221ENST00000543768 TIMM17BO60830 172 aa11.35□□□□□ -0.59
SCNN1A-221ENST00000543768 CRLF1O75462 422 aa11.35□□□□□ -0.59
SCNN1A-221ENST00000543768 IFITM1P13164 125 aa11.35□□□□□ -0.59
SCNN1A-221ENST00000543768 CCDC179H3BU77 68 aa11.35□□□□□ -0.59
SCNN1A-221ENST00000543768 SPATA3Q8NHX4 192 aa11.35□□□□□ -0.59
SCNN1A-221ENST00000543768 HECTD1Q9ULT8 2610 aa11.35□□□□□ -0.59
SCNN1A-221ENST00000543768 SMIM1B2RUZ4 78 aa11.34□□□□□ -0.59
SCNN1A-221ENST00000543768 NTN5Q8WTR8 489 aaPredicted RBP11.34□□□□□ -0.59
SCNN1A-221ENST00000543768 OTOGQ6ZRI0 2925 aa11.34□□□□□ -0.59
SCNN1A-221ENST00000543768 INAFM1C9JVW0 142 aa11.34□□□□□ -0.59
SCNN1A-221ENST00000543768 H7C2G1 150 aa11.34□□□□□ -0.59
SCNN1A-221ENST00000543768 UBE2L6O14933 153 aa11.34□□□□□ -0.59
SCNN1A-221ENST00000543768 FN1P02751 2386 aaKnown RBP11.33□□□□□ -0.6
SCNN1A-221ENST00000543768 F5H768 121 aa11.33□□□□□ -0.6
SCNN1A-221ENST00000543768 H7C423 109 aa11.33□□□□□ -0.6
SCNN1A-221ENST00000543768 NPC2P61916 151 aa11.33□□□□□ -0.6
SCNN1A-221ENST00000543768 LINC01600Q96MT4 127 aa11.33□□□□□ -0.6
SCNN1A-221ENST00000543768 KIR2DL5BQ8NHK3 375 aa11.32□□□□□ -0.6
SCNN1A-221ENST00000543768 Q9H8V8 135 aa11.32□□□□□ -0.6
SCNN1A-221ENST00000543768 ATXN8Q156A1 80 aa11.32□□□□□ -0.6
SCNN1A-221ENST00000543768 LINC01620Q4KN68 170 aa11.32□□□□□ -0.6
SCNN1A-221ENST00000543768 LINC00612Q8N6U2 182 aa11.32□□□□□ -0.6
SCNN1A-221ENST00000543768 TRAV8-4A0A0B4J246 113 aa11.31□□□□□ -0.6
SCNN1A-221ENST00000543768 RPL13AP40429 203 aaKnown RBP11.31□□□□□ -0.6
SCNN1A-221ENST00000543768 DAND5Q8N907 189 aa11.31□□□□□ -0.6
SCNN1A-221ENST00000543768 DEFB130BP0DP73 79 aa11.31□□□□□ -0.6
SCNN1A-221ENST00000543768 DEFB130AP0DP74 79 aa11.31□□□□□ -0.6
SCNN1A-221ENST00000543768 X6R8D5 127 aa11.31□□□□□ -0.6
SCNN1A-221ENST00000543768 TRBV6-8A0A0A6YYG3 113 aa11.3□□□□□ -0.6
SCNN1A-221ENST00000543768 VWFP04275 2813 aa11.3□□□□□ -0.6
SCNN1A-221ENST00000543768 Q1RN00 199 aa11.3□□□□□ -0.6
SCNN1A-221ENST00000543768 TRBV30A0A0K0K1B3 111 aa11.29□□□□□ -0.6
SCNN1A-221ENST00000543768 HERV-K104P63124 156 aa11.29□□□□□ -0.6
SCNN1A-221ENST00000543768 SHISA2Q6UWI4 295 aa11.29□□□□□ -0.6
SCNN1A-221ENST00000543768 C15orf53Q8NAA6 179 aa11.29□□□□□ -0.6
SCNN1A-221ENST00000543768 ZNF625Q96I27 306 aaPredicted RBP11.29□□□□□ -0.6
SCNN1A-221ENST00000543768 TRBV10-2A0A0K0K1G8 114 aa11.28□□□□□ -0.6
SCNN1A-221ENST00000543768 CIRBPQ14011 172 aaKnown RBP11.28□□□□□ -0.6
SCNN1A-221ENST00000543768 SMIM20Q8N5G0 67 aa11.28□□□□□ -0.6
SCNN1A-221ENST00000543768 NOTCH2Q04721 2471 aa11.28□□□□□ -0.6
SCNN1A-221ENST00000543768 IGLV4-60A0A075B6I1 120 aa11.28□□□□□ -0.6
SCNN1A-221ENST00000543768 TRIAP1O43715 76 aa11.28□□□□□ -0.6
SCNN1A-221ENST00000543768 C9orf66Q5T8R8 295 aa11.28□□□□□ -0.6
SCNN1A-221ENST00000543768 TEX49A0A1B0GTD5 131 aa11.27□□□□□ -0.6
SCNN1A-221ENST00000543768 UBE2WQ96B02 151 aa11.27□□□□□ -0.61
SCNN1A-221ENST00000543768 NSD1Q96L73 2696 aaPredicted RBP11.27□□□□□ -0.61
SCNN1A-221ENST00000543768 LINC00308Q8TCZ7 52 aa11.26□□□□□ -0.61
SCNN1A-221ENST00000543768 SMIM9A6NGZ8 99 aa11.26□□□□□ -0.61
SCNN1A-221ENST00000543768 MRPL23Q16540 153 aaKnown RBP11.25□□□□□ -0.61
SCNN1A-221ENST00000543768 PRIMA1Q86XR5 153 aa11.25□□□□□ -0.61
SCNN1A-221ENST00000543768 CHCHD5Q9BSY4 110 aa11.25□□□□□ -0.61
SCNN1A-221ENST00000543768 ICOSQ9Y6W8 199 aa11.25□□□□□ -0.61
SCNN1A-221ENST00000543768 A0A0U1RRA0 63 aa11.25□□□□□ -0.61
SCNN1A-221ENST00000543768 GYPEP15421 78 aa11.24□□□□□ -0.61
SCNN1A-221ENST00000543768 SOSTDC1Q6X4U4 206 aa11.24□□□□□ -0.61
SCNN1A-221ENST00000543768 IGKV3OR2-268A0A0C4DH90 116 aa11.23□□□□□ -0.61
SCNN1A-221ENST00000543768 NBEAL2Q6ZNJ1 2754 aa11.22□□□□□ -0.61
SCNN1A-221ENST00000543768 TENM1Q9UKZ4 2725 aa11.22□□□□□ -0.61
SCNN1A-221ENST00000543768 IGHV3OR16-9A0A0B4J2B5 98 aa11.22□□□□□ -0.61
SCNN1A-221ENST00000543768 C2orf82Q6UX34 121 aa11.22□□□□□ -0.61
SCNN1A-221ENST00000543768 MEIG1Q5JSS6 88 aa11.21□□□□□ -0.61
SCNN1A-221ENST00000543768 FAM222AQ5U5X8 452 aa11.21□□□□□ -0.61
SCNN1A-221ENST00000543768 PRO0255Q9UI72 69 aa11.21□□□□□ -0.62
SCNN1A-221ENST00000543768 H3BT86 120 aa11.2□□□□□ -0.62
SCNN1A-221ENST00000543768 DEFB135Q30KP9 77 aa11.2□□□□□ -0.62
SCNN1A-221ENST00000543768 COX7B2Q8TF08 81 aa11.2□□□□□ -0.62
SCNN1A-221ENST00000543768 FAM240AA0A1B0GVK7 77 aa11.19□□□□□ -0.62
SCNN1A-221ENST00000543768 LYRM9A8MSI8 78 aa11.19□□□□□ -0.62
SCNN1A-221ENST00000543768 HIVEP1P15822 2718 aa11.19□□□□□ -0.62
SCNN1A-221ENST00000543768 COX6CP09669 75 aa11.18□□□□□ -0.62
SCNN1A-221ENST00000543768 COPS9Q8WXC6 57 aa11.18□□□□□ -0.62
SCNN1A-221ENST00000543768 DEFB4AO15263 64 aa11.18□□□□□ -0.62
SCNN1A-221ENST00000543768 A0A087WZ39 114 aa11.17□□□□□ -0.62
SCNN1A-221ENST00000543768 LINC00959A0A1B0GUT2 108 aa11.17□□□□□ -0.62
SCNN1A-221ENST00000543768 TOMM7Q9P0U1 55 aa11.17□□□□□ -0.62
SCNN1A-221ENST00000543768 A0A1B0GUV1 79 aa11.17□□□□□ -0.62
SCNN1A-221ENST00000543768 APOC4P55056 127 aa11.17□□□□□ -0.62
SCNN1A-221ENST00000543768 DEFB121Q5J5C9 76 aa11.17□□□□□ -0.62
SCNN1A-221ENST00000543768 CLEC2BQ92478 149 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms