RNA–Protein interactions for RNA: ENST00000541764.5

LMO3-227, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 1,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-227ENST00000541764 A8MZ25 164 aa7□□□□□ -1.29
LMO3-227ENST00000541764 TMEM262E9PQX1 116 aa7□□□□□ -1.29
LMO3-227ENST00000541764 RPL13AP40429 203 aaKnown RBP7□□□□□ -1.29
LMO3-227ENST00000541764 Q1RN00 199 aa7□□□□□ -1.29
LMO3-227ENST00000541764 ANKRD29Q8N6D5 301 aa7□□□□□ -1.29
LMO3-227ENST00000541764 CDIP1Q9H305 208 aa7□□□□□ -1.29
LMO3-227ENST00000541764 ZNF469Q96JG9 3925 aaPredicted RBP6.99□□□□□ -1.29
LMO3-227ENST00000541764 TRGV2A0A075B6R0 118 aa6.99□□□□□ -1.29
LMO3-227ENST00000541764 C9JAW5 83 aa6.99□□□□□ -1.29
LMO3-227ENST00000541764 H3BT86 120 aa6.99□□□□□ -1.29
LMO3-227ENST00000541764 GAGE7O76087 117 aa6.99□□□□□ -1.29
LMO3-227ENST00000541764 GAGE12FP0CL80 117 aa6.99□□□□□ -1.29
LMO3-227ENST00000541764 GAGE12GP0CL81 117 aa6.99□□□□□ -1.29
LMO3-227ENST00000541764 GAGE12IP0CL82 117 aa6.99□□□□□ -1.29
LMO3-227ENST00000541764 FHL2Q14192 279 aa6.99□□□□□ -1.29
LMO3-227ENST00000541764 LINC00308Q8TCZ7 52 aa6.99□□□□□ -1.29
LMO3-227ENST00000541764 Q9H8V8 135 aa6.99□□□□□ -1.29
LMO3-227ENST00000541764 UBE2L6O14933 153 aa6.98□□□□□ -1.29
LMO3-227ENST00000541764 TRBV6-8A0A0A6YYG3 113 aa6.98□□□□□ -1.29
LMO3-227ENST00000541764 TRAV13-1A0A0B4J241 112 aa6.98□□□□□ -1.29
LMO3-227ENST00000541764 TRGV4A0A0C4DH28 118 aa6.98□□□□□ -1.29
LMO3-227ENST00000541764 SMIM9A6NGZ8 99 aa6.98□□□□□ -1.29
LMO3-227ENST00000541764 LST1O00453 97 aa6.98□□□□□ -1.29
LMO3-227ENST00000541764 RPL35AP18077 110 aaKnown RBP6.98□□□□□ -1.29
LMO3-227ENST00000541764 HIST2H2BCQ6DN03 193 aa6.98□□□□□ -1.29
LMO3-227ENST00000541764 LINC00482Q8N8I6 264 aa6.98□□□□□ -1.29
LMO3-227ENST00000541764 WFDC10AQ9H1F0 79 aa6.98□□□□□ -1.29
LMO3-227ENST00000541764 PDZD2O15018 2839 aa6.98□□□□□ -1.29
LMO3-227ENST00000541764 H7C2G1 150 aa6.97□□□□□ -1.29
LMO3-227ENST00000541764 SHISA2Q6UWI4 295 aa6.97□□□□□ -1.29
LMO3-227ENST00000541764 PF4P02776 101 aa6.96□□□□□ -1.3
LMO3-227ENST00000541764 DEFB121Q5J5C9 76 aa6.96□□□□□ -1.3
LMO3-227ENST00000541764 LCE1DQ5T752 114 aa6.96□□□□□ -1.3
LMO3-227ENST00000541764 CHD6Q8TD26 2715 aa6.96□□□□□ -1.3
LMO3-227ENST00000541764 EPG5Q9HCE0 2579 aa6.96□□□□□ -1.3
LMO3-227ENST00000541764 IGHV3OR16-9A0A0B4J2B5 98 aa6.95□□□□□ -1.3
LMO3-227ENST00000541764 KRTAP10-3P60369 221 aa6.95□□□□□ -1.3
LMO3-227ENST00000541764 FAM222AQ5U5X8 452 aa6.95□□□□□ -1.3
LMO3-227ENST00000541764 PRIMA1Q86XR5 153 aa6.95□□□□□ -1.3
LMO3-227ENST00000541764 LINC01561Q8N1V8 128 aa6.95□□□□□ -1.3
LMO3-227ENST00000541764 TLN2Q9Y4G6 2542 aa6.94□□□□□ -1.3
LMO3-227ENST00000541764 FLNAP21333 2647 aaKnown RBP6.94□□□□□ -1.3
LMO3-227ENST00000541764 LOC100131303A0A0U1RQF7 123 aa6.94□□□□□ -1.3
LMO3-227ENST00000541764 A0A1B0GUV1 79 aa6.94□□□□□ -1.3
LMO3-227ENST00000541764 SOSTDC1Q6X4U4 206 aa6.94□□□□□ -1.3
LMO3-227ENST00000541764 SONP18583 2426 aaKnown RBP6.94□□□□□ -1.3
LMO3-227ENST00000541764 A0A087WZ39 114 aa6.93□□□□□ -1.3
LMO3-227ENST00000541764 COX7A2LO14548 114 aa6.93□□□□□ -1.3
LMO3-227ENST00000541764 COX7B2Q8TF08 81 aa6.93□□□□□ -1.3
LMO3-227ENST00000541764 NTN5Q8WTR8 489 aaPredicted RBP6.93□□□□□ -1.3
LMO3-227ENST00000541764 TRAV26-1A0A087WT03 109 aa6.92□□□□□ -1.3
LMO3-227ENST00000541764 LYRM9A8MSI8 78 aa6.92□□□□□ -1.3
LMO3-227ENST00000541764 MEIG1Q5JSS6 88 aa6.92□□□□□ -1.3
LMO3-227ENST00000541764 C2orf82Q6UX34 121 aa6.92□□□□□ -1.3
LMO3-227ENST00000541764 DAND5Q8N907 189 aa6.92□□□□□ -1.3
LMO3-227ENST00000541764 X6R8D5 127 aa6.92□□□□□ -1.3
LMO3-227ENST00000541764 NBPF19A0A087WUL8 3843 aa6.92□□□□□ -1.3
LMO3-227ENST00000541764 IGLV4-60A0A075B6I1 120 aa6.92□□□□□ -1.3
LMO3-227ENST00000541764 TRAV13-2A0A0B4J235 113 aa6.92□□□□□ -1.3
LMO3-227ENST00000541764 FAM240AA0A1B0GVK7 77 aa6.92□□□□□ -1.3
LMO3-227ENST00000541764 IBA57-AS1B1ANH7 110 aa6.92□□□□□ -1.3
LMO3-227ENST00000541764 TRACP01848 142 aa6.92□□□□□ -1.3
LMO3-227ENST00000541764 NPC2P61916 151 aa6.92□□□□□ -1.3
LMO3-227ENST00000541764 GAGE6Q13070 117 aa6.92□□□□□ -1.3
LMO3-227ENST00000541764 C9orf66Q5T8R8 295 aa6.92□□□□□ -1.3
LMO3-227ENST00000541764 UBE2WQ96B02 151 aa6.92□□□□□ -1.3
LMO3-227ENST00000541764 CRLF1O75462 422 aa6.91□□□□□ -1.3
LMO3-227ENST00000541764 XGP55808 180 aa6.91□□□□□ -1.3
LMO3-227ENST00000541764 MRPL23Q16540 153 aaKnown RBP6.91□□□□□ -1.3
LMO3-227ENST00000541764 CHCHD5Q9BSY4 110 aa6.91□□□□□ -1.3
LMO3-227ENST00000541764 PRO0255Q9UI72 69 aa6.91□□□□□ -1.3
LMO3-227ENST00000541764 LINC00959A0A1B0GUT2 108 aa6.9□□□□□ -1.31
LMO3-227ENST00000541764 LY6G6DO95868 133 aa6.9□□□□□ -1.31
LMO3-227ENST00000541764 MT-ATP8P03928 68 aa6.9□□□□□ -1.31
LMO3-227ENST00000541764 RPL28P46779 137 aaKnown RBP6.9□□□□□ -1.31
LMO3-227ENST00000541764 CLEC2BQ92478 149 aa6.9□□□□□ -1.31
LMO3-227ENST00000541764 TENM4Q6N022 2769 aa6.89□□□□□ -1.31
LMO3-227ENST00000541764 CCDC168Q8NDH2 2452 aa6.89□□□□□ -1.31
LMO3-227ENST00000541764 WNK1Q9H4A3 2382 aa6.89□□□□□ -1.31
LMO3-227ENST00000541764 GHRHP01286 108 aa6.89□□□□□ -1.31
LMO3-227ENST00000541764 MDFIQ99750 246 aa6.89□□□□□ -1.31
LMO3-227ENST00000541764 CITED1Q99966 193 aa6.89□□□□□ -1.31
LMO3-227ENST00000541764 NF1P21359 2839 aa6.88□□□□□ -1.31
LMO3-227ENST00000541764 TEX49A0A1B0GTD5 131 aa6.88□□□□□ -1.31
LMO3-227ENST00000541764 A0A1B0GV72 72 aa6.88□□□□□ -1.31
LMO3-227ENST00000541764 GYPEP15421 78 aa6.88□□□□□ -1.31
LMO3-227ENST00000541764 Q6Q795 121 aa6.88□□□□□ -1.31
LMO3-227ENST00000541764 TRAV8-4A0A0B4J246 113 aa6.87□□□□□ -1.31
LMO3-227ENST00000541764 DEFB130BP0DP73 79 aa6.87□□□□□ -1.31
LMO3-227ENST00000541764 DEFB130AP0DP74 79 aa6.87□□□□□ -1.31
LMO3-227ENST00000541764 SS18Q15532 418 aa6.87□□□□□ -1.31
LMO3-227ENST00000541764 Q8IZM0 81 aa6.87□□□□□ -1.31
LMO3-227ENST00000541764 MIR7-3HGQ8N6C7 128 aa6.87□□□□□ -1.31
LMO3-227ENST00000541764 SETXQ7Z333 2677 aaKnown RBP6.87□□□□□ -1.31
LMO3-227ENST00000541764 APOC4P55056 127 aa6.86□□□□□ -1.31
LMO3-227ENST00000541764 SMR3AQ99954 134 aa6.86□□□□□ -1.31
LMO3-227ENST00000541764 SND1-IT1Q9HBX3 110 aa6.86□□□□□ -1.31
LMO3-227ENST00000541764 KMT2BQ9UMN6 2715 aaPredicted RBP6.86□□□□□ -1.31
LMO3-227ENST00000541764 IGKV2-28A0A075B6P5 120 aa6.85□□□□□ -1.31
LMO3-227ENST00000541764 A0A0U1RRA0 63 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms