RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 UBE2L6O14933 153 aa9.39□□□□□ -0.91
PRKAB1-206ENST00000541640 NPC2P61916 151 aa9.39□□□□□ -0.91
PRKAB1-206ENST00000541640 ANKRD29Q8N6D5 301 aa9.39□□□□□ -0.91
PRKAB1-206ENST00000541640 Q9H8V8 135 aa9.39□□□□□ -0.91
PRKAB1-206ENST00000541640 ICOSQ9Y6W8 199 aa9.39□□□□□ -0.91
PRKAB1-206ENST00000541640 HIVEP2P31629 2446 aa9.39□□□□□ -0.91
PRKAB1-206ENST00000541640 A0A1B0GV72 72 aa9.38□□□□□ -0.91
PRKAB1-206ENST00000541640 F5H768 121 aa9.38□□□□□ -0.91
PRKAB1-206ENST00000541640 LINC01600Q96MT4 127 aa9.38□□□□□ -0.91
PRKAB1-206ENST00000541640 TRGV4A0A0C4DH28 118 aa9.38□□□□□ -0.91
PRKAB1-206ENST00000541640 LOC100131303A0A0U1RQF7 123 aa9.38□□□□□ -0.91
PRKAB1-206ENST00000541640 MTORP42345 2549 aa9.38□□□□□ -0.91
PRKAB1-206ENST00000541640 SETXQ7Z333 2677 aaKnown RBP9.38□□□□□ -0.91
PRKAB1-206ENST00000541640 CKS1BP61024 79 aa9.37□□□□□ -0.91
PRKAB1-206ENST00000541640 LINC01620Q4KN68 170 aa9.37□□□□□ -0.91
PRKAB1-206ENST00000541640 CDIP1Q9H305 208 aa9.37□□□□□ -0.91
PRKAB1-206ENST00000541640 INAFM1C9JVW0 142 aa9.37□□□□□ -0.91
PRKAB1-206ENST00000541640 FHL2Q14192 279 aa9.37□□□□□ -0.91
PRKAB1-206ENST00000541640 DAND5Q8N907 189 aa9.37□□□□□ -0.91
PRKAB1-206ENST00000541640 ZNF625Q96I27 306 aaPredicted RBP9.37□□□□□ -0.91
PRKAB1-206ENST00000541640 LINC00308Q8TCZ7 52 aa9.36□□□□□ -0.91
PRKAB1-206ENST00000541640 HIVEP1P15822 2718 aa9.36□□□□□ -0.91
PRKAB1-206ENST00000541640 KRTAP10-3P60369 221 aa9.36□□□□□ -0.91
PRKAB1-206ENST00000541640 COX6CP09669 75 aa9.35□□□□□ -0.91
PRKAB1-206ENST00000541640 COPS9Q8WXC6 57 aa9.35□□□□□ -0.91
PRKAB1-206ENST00000541640 RPL13AP40429 203 aaKnown RBP9.34□□□□□ -0.91
PRKAB1-206ENST00000541640 HERV-K104P63124 156 aa9.34□□□□□ -0.91
PRKAB1-206ENST00000541640 LINC00482Q8N8I6 264 aa9.34□□□□□ -0.91
PRKAB1-206ENST00000541640 TRBV10-2A0A0K0K1G8 114 aa9.34□□□□□ -0.91
PRKAB1-206ENST00000541640 CYSRT1A8MQ03 144 aa9.34□□□□□ -0.91
PRKAB1-206ENST00000541640 PF4P02776 101 aa9.33□□□□□ -0.92
PRKAB1-206ENST00000541640 PRIMA1Q86XR5 153 aa9.33□□□□□ -0.92
PRKAB1-206ENST00000541640 KIR2DL5BQ8NHK3 375 aa9.33□□□□□ -0.92
PRKAB1-206ENST00000541640 PPDPFQ9H3Y8 114 aa9.33□□□□□ -0.92
PRKAB1-206ENST00000541640 TRAV26-1A0A087WT03 109 aa9.33□□□□□ -0.92
PRKAB1-206ENST00000541640 TRBV6-8A0A0A6YYG3 113 aa9.33□□□□□ -0.92
PRKAB1-206ENST00000541640 MT-ATP8P03928 68 aa9.33□□□□□ -0.92
PRKAB1-206ENST00000541640 LINC00612Q8N6U2 182 aa9.33□□□□□ -0.92
PRKAB1-206ENST00000541640 CFAP161Q6P656 301 aa9.32□□□□□ -0.92
PRKAB1-206ENST00000541640 GAGE6Q13070 117 aa9.32□□□□□ -0.92
PRKAB1-206ENST00000541640 MEIG1Q5JSS6 88 aa9.32□□□□□ -0.92
PRKAB1-206ENST00000541640 XGP55808 180 aa9.31□□□□□ -0.92
PRKAB1-206ENST00000541640 SOSTDC1Q6X4U4 206 aa9.31□□□□□ -0.92
PRKAB1-206ENST00000541640 LST1O00453 97 aa9.31□□□□□ -0.92
PRKAB1-206ENST00000541640 IGLV4-60A0A075B6I1 120 aa9.3□□□□□ -0.92
PRKAB1-206ENST00000541640 A0A0U1RRA0 63 aa9.3□□□□□ -0.92
PRKAB1-206ENST00000541640 CRLF1O75462 422 aa9.3□□□□□ -0.92
PRKAB1-206ENST00000541640 NTN5Q8WTR8 489 aaPredicted RBP9.3□□□□□ -0.92
PRKAB1-206ENST00000541640 NSD1Q96L73 2696 aaPredicted RBP9.3□□□□□ -0.92
PRKAB1-206ENST00000541640 TMEM262E9PQX1 116 aa9.3□□□□□ -0.92
PRKAB1-206ENST00000541640 H3BT86 120 aa9.29□□□□□ -0.92
PRKAB1-206ENST00000541640 COX7B2Q8TF08 81 aa9.29□□□□□ -0.92
PRKAB1-206ENST00000541640 CLEC2BQ92478 149 aa9.29□□□□□ -0.92
PRKAB1-206ENST00000541640 CHCHD5Q9BSY4 110 aa9.29□□□□□ -0.92
PRKAB1-206ENST00000541640 NOTCH3Q9UM47 2321 aa9.29□□□□□ -0.92
PRKAB1-206ENST00000541640 F8P00451 2351 aa9.29□□□□□ -0.92
PRKAB1-206ENST00000541640 SMIM9A6NGZ8 99 aa9.28□□□□□ -0.92
PRKAB1-206ENST00000541640 DEFB130BP0DP73 79 aa9.28□□□□□ -0.92
PRKAB1-206ENST00000541640 DEFB130AP0DP74 79 aa9.28□□□□□ -0.92
PRKAB1-206ENST00000541640 JMJD1CQ15652 2540 aa9.28□□□□□ -0.92
PRKAB1-206ENST00000541640 C2orf82Q6UX34 121 aa9.28□□□□□ -0.92
PRKAB1-206ENST00000541640 X6R8D5 127 aa9.28□□□□□ -0.92
PRKAB1-206ENST00000541640 FN1P02751 2386 aaKnown RBP9.27□□□□□ -0.92
PRKAB1-206ENST00000541640 IGHV3OR16-9A0A0B4J2B5 98 aa9.27□□□□□ -0.92
PRKAB1-206ENST00000541640 SHISA2Q6UWI4 295 aa9.27□□□□□ -0.92
PRKAB1-206ENST00000541640 NIPBLQ6KC79 2804 aaeCLIP9.27□□□□□ -0.935e-6■■■□□ 16.4
PRKAB1-206ENST00000541640 SETD2Q9BYW2 2564 aaPredicted RBP9.26□□□□□ -0.93
PRKAB1-206ENST00000541640 IGKV3OR2-268A0A0C4DH90 116 aa9.26□□□□□ -0.93
PRKAB1-206ENST00000541640 UBE2WQ96B02 151 aa9.26□□□□□ -0.93
PRKAB1-206ENST00000541640 A0A087WZ39 114 aa9.25□□□□□ -0.93
PRKAB1-206ENST00000541640 TEX49A0A1B0GTD5 131 aa9.25□□□□□ -0.93
PRKAB1-206ENST00000541640 COX7A2LO14548 114 aa9.25□□□□□ -0.93
PRKAB1-206ENST00000541640 GYPEP15421 78 aa9.25□□□□□ -0.93
PRKAB1-206ENST00000541640 C9orf66Q5T8R8 295 aa9.25□□□□□ -0.93
PRKAB1-206ENST00000541640 LINC00959A0A1B0GUT2 108 aa9.23□□□□□ -0.93
PRKAB1-206ENST00000541640 A0A1B0GUV1 79 aa9.23□□□□□ -0.93
PRKAB1-206ENST00000541640 TOMM7Q9P0U1 55 aa9.23□□□□□ -0.93
PRKAB1-206ENST00000541640 PRO0255Q9UI72 69 aa9.23□□□□□ -0.93
PRKAB1-206ENST00000541640 LYRM9A8MSI8 78 aa9.22□□□□□ -0.93
PRKAB1-206ENST00000541640 FAM222AQ5U5X8 452 aa9.22□□□□□ -0.93
PRKAB1-206ENST00000541640 MIR7-3HGQ8N6C7 128 aa9.22□□□□□ -0.93
PRKAB1-206ENST00000541640 SPATA3Q8NHX4 192 aa9.22□□□□□ -0.93
PRKAB1-206ENST00000541640 TRAV13-2A0A0B4J235 113 aa9.21□□□□□ -0.93
PRKAB1-206ENST00000541640 IBA57-AS1B1ANH7 110 aa9.21□□□□□ -0.93
PRKAB1-206ENST00000541640 DEFB121Q5J5C9 76 aa9.21□□□□□ -0.93
PRKAB1-206ENST00000541640 C5orf38Q86SI9 138 aa9.21□□□□□ -0.94
PRKAB1-206ENST00000541640 TRAV8-4A0A0B4J246 113 aa9.2□□□□□ -0.94
PRKAB1-206ENST00000541640 C2CD3Q4AC94 2353 aa9.2□□□□□ -0.94
PRKAB1-206ENST00000541640 SND1-IT1Q9HBX3 110 aa9.2□□□□□ -0.94
PRKAB1-206ENST00000541640 TRACP01848 142 aa9.19□□□□□ -0.94
PRKAB1-206ENST00000541640 RPL28P46779 137 aaKnown RBP9.19□□□□□ -0.94
PRKAB1-206ENST00000541640 LINC00158P58513 81 aa9.19□□□□□ -0.94
PRKAB1-206ENST00000541640 SS18Q15532 418 aa9.19□□□□□ -0.94
PRKAB1-206ENST00000541640 IGKV2-28A0A075B6P5 120 aa9.19□□□□□ -0.94
PRKAB1-206ENST00000541640 PAX4O43316 350 aa9.19□□□□□ -0.94
PRKAB1-206ENST00000541640 IGKV2D-28P01615 120 aa9.19□□□□□ -0.94
PRKAB1-206ENST00000541640 CRPP02741 224 aa9.19□□□□□ -0.94
PRKAB1-206ENST00000541640 APOC4P55056 127 aa9.18□□□□□ -0.94
PRKAB1-206ENST00000541640 LINC01561Q8N1V8 128 aa9.18□□□□□ -0.94
PRKAB1-206ENST00000541640 LINC00337Q8N6G1 96 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms