RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 TIMM17BO60830 172 aa17.58■□□□□ 0.41
RAB40C-204ENST00000538492 DEFB130BP0DP73 79 aa17.58■□□□□ 0.41
RAB40C-204ENST00000538492 DEFB130AP0DP74 79 aa17.58■□□□□ 0.41
RAB40C-204ENST00000538492 LINC00482Q8N8I6 264 aa17.58■□□□□ 0.41
RAB40C-204ENST00000538492 C9JAW5 83 aa17.58■□□□□ 0.4
RAB40C-204ENST00000538492 OTOGQ6ZRI0 2925 aa17.58■□□□□ 0.4
RAB40C-204ENST00000538492 SMAGPQ0VAQ4 97 aa17.57■□□□□ 0.4
RAB40C-204ENST00000538492 GAGE6Q13070 117 aa17.57■□□□□ 0.4
RAB40C-204ENST00000538492 TEN1Q86WV5 123 aa17.57■□□□□ 0.4
RAB40C-204ENST00000538492 CRLF1O75462 422 aa17.56■□□□□ 0.4
RAB40C-204ENST00000538492 CIRBPQ14011 172 aaKnown RBP17.56■□□□□ 0.4
RAB40C-204ENST00000538492 IGKV3OR2-268A0A0C4DH90 116 aa17.56■□□□□ 0.4
RAB40C-204ENST00000538492 F5H768 121 aa17.55■□□□□ 0.4
RAB40C-204ENST00000538492 TRBV30A0A0K0K1B3 111 aa17.55■□□□□ 0.4
RAB40C-204ENST00000538492 SLC25A20O43772 301 aa17.55■□□□□ 0.4
RAB40C-204ENST00000538492 SPATA3Q8NHX4 192 aa17.55■□□□□ 0.4
RAB40C-204ENST00000538492 CARD19Q96LW7 228 aa17.55■□□□□ 0.4
RAB40C-204ENST00000538492 CIDEAO60543 219 aa17.54■□□□□ 0.4
RAB40C-204ENST00000538492 ANKRD29Q8N6D5 301 aa17.54■□□□□ 0.4
RAB40C-204ENST00000538492 ICOSQ9Y6W8 199 aa17.54■□□□□ 0.4
RAB40C-204ENST00000538492 SPATA25Q9BR10 227 aa17.54■□□□□ 0.4
RAB40C-204ENST00000538492 IFITM1P13164 125 aa17.53■□□□□ 0.4
RAB40C-204ENST00000538492 PRIMA1Q86XR5 153 aa17.53■□□□□ 0.4
RAB40C-204ENST00000538492 SIGMAR1Q99720 223 aa17.53■□□□□ 0.4
RAB40C-204ENST00000538492 ATXN8Q156A1 80 aa17.52■□□□□ 0.39
RAB40C-204ENST00000538492 LINC00308Q8TCZ7 52 aa17.51■□□□□ 0.39
RAB40C-204ENST00000538492 PPDPFLQ8WWR9 84 aa17.51■□□□□ 0.39
RAB40C-204ENST00000538492 IGLV4-60A0A075B6I1 120 aa17.51■□□□□ 0.39
RAB40C-204ENST00000538492 TRBV6-8A0A0A6YYG3 113 aa17.51■□□□□ 0.39
RAB40C-204ENST00000538492 CHCHD5Q9BSY4 110 aa17.51■□□□□ 0.39
RAB40C-204ENST00000538492 RPL13AP40429 203 aaKnown RBP17.5■□□□□ 0.39
RAB40C-204ENST00000538492 MEIG1Q5JSS6 88 aa17.5■□□□□ 0.39
RAB40C-204ENST00000538492 INAFM1C9JVW0 142 aa17.5■□□□□ 0.39
RAB40C-204ENST00000538492 RNF183Q96D59 192 aa17.5■□□□□ 0.39
RAB40C-204ENST00000538492 TENM1Q9UKZ4 2725 aa17.5■□□□□ 0.39
RAB40C-204ENST00000538492 H7C423 109 aa17.49■□□□□ 0.39
RAB40C-204ENST00000538492 LINC01620Q4KN68 170 aa17.49■□□□□ 0.39
RAB40C-204ENST00000538492 NSD1Q96L73 2696 aaPredicted RBP17.48■□□□□ 0.39
RAB40C-204ENST00000538492 SOSTDC1Q6X4U4 206 aa17.46■□□□□ 0.39
RAB40C-204ENST00000538492 KIR2DL5BQ8NHK3 375 aa17.45■□□□□ 0.38
RAB40C-204ENST00000538492 CLEC2BQ92478 149 aa17.45■□□□□ 0.38
RAB40C-204ENST00000538492 X6R8D5 127 aa17.45■□□□□ 0.38
RAB40C-204ENST00000538492 COX6CP09669 75 aa17.44■□□□□ 0.38
RAB40C-204ENST00000538492 TOMM7Q9P0U1 55 aa17.44■□□□□ 0.38
RAB40C-204ENST00000538492 GYPEP15421 78 aa17.43■□□□□ 0.38
RAB40C-204ENST00000538492 CDIP1Q9H305 208 aa17.42■□□□□ 0.38
RAB40C-204ENST00000538492 HERV-K104P63124 156 aa17.41■□□□□ 0.38
RAB40C-204ENST00000538492 LINC00612Q8N6U2 182 aa17.41■□□□□ 0.38
RAB40C-204ENST00000538492 COX7B2Q8TF08 81 aa17.4■□□□□ 0.38
RAB40C-204ENST00000538492 NTN5Q8WTR8 489 aaPredicted RBP17.4■□□□□ 0.38
RAB40C-204ENST00000538492 A0A096LPF7 62 aa17.39■□□□□ 0.38
RAB40C-204ENST00000538492 TRBV10-2A0A0K0K1G8 114 aa17.39■□□□□ 0.37
RAB40C-204ENST00000538492 DEFB4AO15263 64 aa17.39■□□□□ 0.37
RAB40C-204ENST00000538492 M0QXV9 152 aa17.38■□□□□ 0.37
RAB40C-204ENST00000538492 C9orf66Q5T8R8 295 aa17.38■□□□□ 0.37
RAB40C-204ENST00000538492 DEFB135Q30KP9 77 aa17.37■□□□□ 0.37
RAB40C-204ENST00000538492 FAM222AQ5U5X8 452 aa17.37■□□□□ 0.37
RAB40C-204ENST00000538492 IGHV3OR16-9A0A0B4J2B5 98 aa17.37■□□□□ 0.37
RAB40C-204ENST00000538492 TMEM262E9PQX1 116 aa17.36■□□□□ 0.37
RAB40C-204ENST00000538492 C5orf38Q86SI9 138 aa17.36■□□□□ 0.37
RAB40C-204ENST00000538492 COPS9Q8WXC6 57 aa17.36■□□□□ 0.37
RAB40C-204ENST00000538492 ATRQ13535 2644 aa17.36■□□□□ 0.37
RAB40C-204ENST00000538492 TRRAPQ9Y4A5 3859 aa17.35■□□□□ 0.37
RAB40C-204ENST00000538492 TEX49A0A1B0GTD5 131 aa17.35■□□□□ 0.37
RAB40C-204ENST00000538492 LST1O00453 97 aa17.35■□□□□ 0.37
RAB40C-204ENST00000538492 SMIM9A6NGZ8 99 aa17.35■□□□□ 0.37
RAB40C-204ENST00000538492 C2orf82Q6UX34 121 aa17.35■□□□□ 0.37
RAB40C-204ENST00000538492 HIVEP1P15822 2718 aa17.34■□□□□ 0.37
RAB40C-204ENST00000538492 PRO0255Q9UI72 69 aa17.34■□□□□ 0.37
RAB40C-204ENST00000538492 LINC00959A0A1B0GUT2 108 aa17.33■□□□□ 0.36
RAB40C-204ENST00000538492 MIR7-3HGQ8N6C7 128 aa17.32■□□□□ 0.36
RAB40C-204ENST00000538492 CLPSL2Q6UWE3 100 aa17.32■□□□□ 0.36
RAB40C-204ENST00000538492 A0A087WZ39 114 aa17.31■□□□□ 0.36
RAB40C-204ENST00000538492 XGP55808 180 aa17.31■□□□□ 0.36
RAB40C-204ENST00000538492 MT-ATP8P03928 68 aa17.3■□□□□ 0.36
RAB40C-204ENST00000538492 TEP1Q99973 2627 aaKnown RBP17.3■□□□□ 0.36
RAB40C-204ENST00000538492 XCL1P47992 114 aa17.3■□□□□ 0.36
RAB40C-204ENST00000538492 PAX4O43316 350 aa17.29■□□□□ 0.36
RAB40C-204ENST00000538492 SCGB1A1P11684 91 aa17.29■□□□□ 0.36
RAB40C-204ENST00000538492 LINC01600Q96MT4 127 aa17.29■□□□□ 0.36
RAB40C-204ENST00000538492 LINC00158P58513 81 aa17.28■□□□□ 0.36
RAB40C-204ENST00000538492 C11orf68Q9H3H3 251 aaKnown RBP17.28■□□□□ 0.36
RAB40C-204ENST00000538492 SHISA2Q6UWI4 295 aa17.28■□□□□ 0.36
RAB40C-204ENST00000538492 LYRM9A8MSI8 78 aa17.27■□□□□ 0.36
RAB40C-204ENST00000538492 UBE2WQ96B02 151 aa17.27■□□□□ 0.36
RAB40C-204ENST00000538492 IGHV4-28A0A0C4DH34 117 aa17.26■□□□□ 0.35
RAB40C-204ENST00000538492 H3BT86 120 aa17.26■□□□□ 0.35
RAB40C-204ENST00000538492 COX7A2LO14548 114 aa17.26■□□□□ 0.35
RAB40C-204ENST00000538492 PFN2P35080 140 aa17.25■□□□□ 0.35
RAB40C-204ENST00000538492 A0A1B0GUV1 79 aa17.24■□□□□ 0.35
RAB40C-204ENST00000538492 APOC4P55056 127 aa17.24■□□□□ 0.35
RAB40C-204ENST00000538492 SND1-IT1Q9HBX3 110 aa17.24■□□□□ 0.35
RAB40C-204ENST00000538492 SS18Q15532 418 aa17.23■□□□□ 0.35
RAB40C-204ENST00000538492 CITED1Q99966 193 aa17.23■□□□□ 0.35
RAB40C-204ENST00000538492 DAD1P61803 113 aa17.22■□□□□ 0.35
RAB40C-204ENST00000538492 C6orf226Q5I0X4 101 aa17.22■□□□□ 0.35
RAB40C-204ENST00000538492 CELA1Q9UNI1 258 aa17.22■□□□□ 0.35
RAB40C-204ENST00000538492 Q8N3U1 123 aa17.21■□□□□ 0.35
RAB40C-204ENST00000538492 LINC00337Q8N6G1 96 aa17.21■□□□□ 0.35
RAB40C-204ENST00000538492 IGKV2-28A0A075B6P5 120 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms