RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 VPS25Q9BRG1 176 aa9.85□□□□□ -0.83
LIMK1-208ENST00000538333 CITED1Q99966 193 aa9.85□□□□□ -0.83
LIMK1-208ENST00000538333 TRBV6-8A0A0A6YYG3 113 aa9.84□□□□□ -0.83
LIMK1-208ENST00000538333 TCL1BO95988 128 aa9.84□□□□□ -0.83
LIMK1-208ENST00000538333 DEFB130BP0DP73 79 aa9.84□□□□□ -0.83
LIMK1-208ENST00000538333 DEFB130AP0DP74 79 aa9.84□□□□□ -0.83
LIMK1-208ENST00000538333 PSMB2P49721 201 aa9.84□□□□□ -0.83
LIMK1-208ENST00000538333 SMIM9A6NGZ8 99 aa9.84□□□□□ -0.83
LIMK1-208ENST00000538333 PRSS2P07478 247 aa9.84□□□□□ -0.83
LIMK1-208ENST00000538333 SMCPP49901 116 aaPredicted RBP9.84□□□□□ -0.83
LIMK1-208ENST00000538333 ETDBQ3ZM63 59 aa9.84□□□□□ -0.83
LIMK1-208ENST00000538333 TRBV20-1A0A075B6N2 111 aa9.83□□□□□ -0.84
LIMK1-208ENST00000538333 SH2D6Q7Z4S9 175 aa9.83□□□□□ -0.84
LIMK1-208ENST00000538333 RNF183Q96D59 192 aa9.82□□□□□ -0.84
LIMK1-208ENST00000538333 Q9H8V8 135 aa9.82□□□□□ -0.84
LIMK1-208ENST00000538333 ERG28Q9UKR5 140 aa9.82□□□□□ -0.84
LIMK1-208ENST00000538333 GAGE6Q13070 117 aa9.82□□□□□ -0.84
LIMK1-208ENST00000538333 IGLV4-60A0A075B6I1 120 aa9.81□□□□□ -0.84
LIMK1-208ENST00000538333 ZNF625Q96I27 306 aaPredicted RBP9.81□□□□□ -0.84
LIMK1-208ENST00000538333 TENM1Q9UKZ4 2725 aa9.81□□□□□ -0.84
LIMK1-208ENST00000538333 IFITM1P13164 125 aa9.81□□□□□ -0.84
LIMK1-208ENST00000538333 NPC2P61916 151 aa9.8□□□□□ -0.84
LIMK1-208ENST00000538333 DAND5Q8N907 189 aa9.8□□□□□ -0.84
LIMK1-208ENST00000538333 H7C2G1 150 aa9.79□□□□□ -0.84
LIMK1-208ENST00000538333 SCGB1C2P0DMR2 95 aa9.79□□□□□ -0.84
LIMK1-208ENST00000538333 GYPEP15421 78 aa9.79□□□□□ -0.84
LIMK1-208ENST00000538333 CFAP161Q6P656 301 aa9.79□□□□□ -0.84
LIMK1-208ENST00000538333 CHCHD5Q9BSY4 110 aa9.79□□□□□ -0.84
LIMK1-208ENST00000538333 CIRBPQ14011 172 aaKnown RBP9.78□□□□□ -0.84
LIMK1-208ENST00000538333 FAM222AQ5U5X8 452 aa9.78□□□□□ -0.84
LIMK1-208ENST00000538333 TRBV30A0A0K0K1B3 111 aa9.78□□□□□ -0.84
LIMK1-208ENST00000538333 LYRM9A8MSI8 78 aa9.78□□□□□ -0.84
LIMK1-208ENST00000538333 DEFB135Q30KP9 77 aa9.78□□□□□ -0.84
LIMK1-208ENST00000538333 ATP6V0E2Q8NHE4 81 aa9.78□□□□□ -0.84
LIMK1-208ENST00000538333 PRO0255Q9UI72 69 aa9.78□□□□□ -0.84
LIMK1-208ENST00000538333 TRRAPQ9Y4A5 3859 aa9.77□□□□□ -0.85
LIMK1-208ENST00000538333 APOC4P55056 127 aa9.77□□□□□ -0.85
LIMK1-208ENST00000538333 Q1RN00 199 aa9.77□□□□□ -0.85
LIMK1-208ENST00000538333 PRIMA1Q86XR5 153 aa9.77□□□□□ -0.85
LIMK1-208ENST00000538333 WFDC9Q8NEX5 89 aa9.77□□□□□ -0.85
LIMK1-208ENST00000538333 LINC00308Q8TCZ7 52 aa9.77□□□□□ -0.85
LIMK1-208ENST00000538333 IGHV3OR16-9A0A0B4J2B5 98 aa9.76□□□□□ -0.85
LIMK1-208ENST00000538333 TRIAP1O43715 76 aa9.76□□□□□ -0.85
LIMK1-208ENST00000538333 NBEAL2Q6ZNJ1 2754 aa9.76□□□□□ -0.85
LIMK1-208ENST00000538333 WIPF1O43516 503 aa9.75□□□□□ -0.85
LIMK1-208ENST00000538333 HERV-K104P63124 156 aa9.75□□□□□ -0.85
LIMK1-208ENST00000538333 SOSTDC1Q6X4U4 206 aa9.75□□□□□ -0.85
LIMK1-208ENST00000538333 ATRQ13535 2644 aa9.74□□□□□ -0.85
LIMK1-208ENST00000538333 IGHV4-28A0A0C4DH34 117 aa9.74□□□□□ -0.85
LIMK1-208ENST00000538333 IGKV3OR2-268A0A0C4DH90 116 aa9.74□□□□□ -0.85
LIMK1-208ENST00000538333 ICOSQ9Y6W8 199 aa9.74□□□□□ -0.85
LIMK1-208ENST00000538333 J3QR89 54 aa9.74□□□□□ -0.85
LIMK1-208ENST00000538333 DEFB4AO15263 64 aa9.74□□□□□ -0.85
LIMK1-208ENST00000538333 A0A0U1RRA0 63 aa9.73□□□□□ -0.85
LIMK1-208ENST00000538333 A0A1B0GUV1 79 aa9.73□□□□□ -0.85
LIMK1-208ENST00000538333 FOXI1Q12951 378 aa9.73□□□□□ -0.85
LIMK1-208ENST00000538333 Q8NAQ8 132 aa9.73□□□□□ -0.85
LIMK1-208ENST00000538333 LINC00959A0A1B0GUT2 108 aa9.73□□□□□ -0.85
LIMK1-208ENST00000538333 PAX4O43316 350 aa9.73□□□□□ -0.85
LIMK1-208ENST00000538333 MEIG1Q5JSS6 88 aa9.73□□□□□ -0.85
LIMK1-208ENST00000538333 COX7B2Q8TF08 81 aa9.73□□□□□ -0.85
LIMK1-208ENST00000538333 A0A087WZ39 114 aa9.72□□□□□ -0.85
LIMK1-208ENST00000538333 TEN1Q86WV5 123 aa9.72□□□□□ -0.85
LIMK1-208ENST00000538333 PPDPFQ9H3Y8 114 aa9.72□□□□□ -0.85
LIMK1-208ENST00000538333 M0QXV9 152 aa9.71□□□□□ -0.85
LIMK1-208ENST00000538333 RPL13AP40429 203 aaKnown RBP9.71□□□□□ -0.85
LIMK1-208ENST00000538333 ATXN8Q156A1 80 aa9.71□□□□□ -0.85
LIMK1-208ENST00000538333 A0A096LPF7 62 aa9.71□□□□□ -0.86
LIMK1-208ENST00000538333 SLC25A20O43772 301 aa9.71□□□□□ -0.86
LIMK1-208ENST00000538333 MIFP14174 115 aa9.71□□□□□ -0.86
LIMK1-208ENST00000538333 COPS9Q8WXC6 57 aa9.71□□□□□ -0.86
LIMK1-208ENST00000538333 CELA1Q9UNI1 258 aa9.71□□□□□ -0.86
LIMK1-208ENST00000538333 C9JAW5 83 aa9.7□□□□□ -0.86
LIMK1-208ENST00000538333 IGHV4-30-4P0DP06 118 aa9.7□□□□□ -0.86
LIMK1-208ENST00000538333 DAD1P61803 113 aa9.7□□□□□ -0.86
LIMK1-208ENST00000538333 LINC01620Q4KN68 170 aa9.7□□□□□ -0.86
LIMK1-208ENST00000538333 CARD19Q96LW7 228 aa9.7□□□□□ -0.86
LIMK1-208ENST00000538333 TMEM262E9PQX1 116 aa9.69□□□□□ -0.86
LIMK1-208ENST00000538333 LINC01600Q96MT4 127 aa9.69□□□□□ -0.86
LIMK1-208ENST00000538333 TOMM7Q9P0U1 55 aa9.69□□□□□ -0.86
LIMK1-208ENST00000538333 C5orf38Q86SI9 138 aa9.68□□□□□ -0.86
LIMK1-208ENST00000538333 ANKRD29Q8N6D5 301 aa9.68□□□□□ -0.86
LIMK1-208ENST00000538333 PPDPFLQ8WWR9 84 aa9.68□□□□□ -0.86
LIMK1-208ENST00000538333 COX6CP09669 75 aa9.68□□□□□ -0.86
LIMK1-208ENST00000538333 SPATA25Q9BR10 227 aa9.68□□□□□ -0.86
LIMK1-208ENST00000538333 GAGE12HA6NDE8 117 aa9.67□□□□□ -0.86
LIMK1-208ENST00000538333 ATP5G1P05496 136 aa9.67□□□□□ -0.86
LIMK1-208ENST00000538333 TRAV26-1A0A087WT03 109 aa9.65□□□□□ -0.86
LIMK1-208ENST00000538333 TRBV10-2A0A0K0K1G8 114 aa9.65□□□□□ -0.86
LIMK1-208ENST00000538333 LST1O00453 97 aa9.65□□□□□ -0.86
LIMK1-208ENST00000538333 SS18Q15532 418 aa9.65□□□□□ -0.86
LIMK1-208ENST00000538333 SHISA2Q6UWI4 295 aa9.65□□□□□ -0.86
LIMK1-208ENST00000538333 MIR7-3HGQ8N6C7 128 aa9.65□□□□□ -0.86
LIMK1-208ENST00000538333 CLEC2BQ92478 149 aa9.65□□□□□ -0.86
LIMK1-208ENST00000538333 SPART-AS1P0CW21 52 aa9.65□□□□□ -0.86
LIMK1-208ENST00000538333 XCL1P47992 114 aa9.65□□□□□ -0.86
LIMK1-208ENST00000538333 CLPSL2Q6UWE3 100 aa9.64□□□□□ -0.87
LIMK1-208ENST00000538333 IBA57-AS1B1ANH7 110 aa9.64□□□□□ -0.87
LIMK1-208ENST00000538333 LINC01561Q8N1V8 128 aa9.63□□□□□ -0.87
LIMK1-208ENST00000538333 Q8N3U1 123 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms